Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p03180 Brassica napus
A08p03180 Brassica napus
Aa31LG10G3900 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1347 Anthoceros agrestis
Actinidia04366 Actinidia chinensis
Ah.01g011570 Amaranthus hybridus
AL1G58024 Arabidopsis lyrata
Aqoxy3G00003 Aquilegia oxysepala
Aqoxy5G00260 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7F6MXP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9J2F9Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UW2LYQ Arachis hypogaea
AT1G50380 Arabidopsis thaliana
ATR0124G037 Amborella trichopoda
ATR0124G045 Amborella trichopoda
Atru.chr11.47 Acer truncatum
Atru.chr11.48 Acer truncatum
Atru.chr11.49 Acer truncatum
Atru.chr11.52 Acer truncatum
AUR62017751 Chenopodium quinoa
AUR62032901 Chenopodium quinoa
BcaB04g17256 Brassica carinata
BcaC01g01225 Brassica carinata
BolC3t21274H Brassica oleracea
BolC6t35663H Brassica oleracea
BraA06t23529Z Brassica rapa
BraA08t32351Z Brassica rapa
C03p89610 Brassica napus
C06p05570 Brassica napus
CAN.G1507.4 Capsicum annuum
CAN.G739.7 Capsicum annuum
CANSAT78G2104 Cannabis sativa
CARHR040400 Cardamine hirsuta
Carub.0001s3946 Capsella rubella
Ca_11276_v3 Cicer arietinum L.
Cc11_g04170 Coffea canephora
CDE04G0096 Ceratophyllum demersum
Cfa018671 Carpinus fangiana
Ciclev10014380m.g Citrus clementina
Ciclev10018222m.g Citrus clementina
CiPaw.15G000600 Carya illinoinensis
CiPaw.15G000800 Carya illinoinensis
ClCG11G012740 Citrullus lanatus
COL.COLO4_33142 Corchorus olitorius
Cpa.g.sc221.18 Carica papaya
Cre17.g697650 Chlamydomonas reinhardtii
CsaV3_5G029120 Cucumis sativus L.
CSS0019717 Camellia sinensis var. sinensis
CSS0047743 Camellia sinensis var. sinensis
DCAR_026867 Daucus carota
DCAR_026873 Daucus carota
Dinv02496 Davidia involucrata
Dinv02497 Davidia involucrata
Duzib132G0881 Durio zibethinus
Duzib248G0368 Durio zibethinus
ECA233G5707 Erigeron canadensis
ECA233G6260 Erigeron canadensis
EL10Ac9g23012 Beta vulgaris
Eucgr.G02608 Eucalyptus grandis
Eucgr.G02610 Eucalyptus grandis
Eucgr.G02611 Eucalyptus grandis
FAN07G2959 Fragaria x ananassa
FAN17G2050 Fragaria x ananassa
FvH4_4g37301 Fragaria vesca
Glyma.10G288467 Glycine max
Glyma.10G288533 Glycine max
Glyma.20G100400 Glycine max
Gohir.A04G109500 Gossypium hirsutum
Gohir.D04G149700 Gossypium hirsutum
Gorai.012G136300 Gossypium raimondii
GSVIVG01034358001 Vitis vinifera
GSVIVG01034359001 Vitis vinifera
HanXRQChr17g0558111 Helianthus annuus
Haze_17399 Corylus avellana
Hma1.2p1_0018F.1_g013300 Hydrangea macrophylla
HPP92_022044 Vanilla planifolia
HPP92_022058 Vanilla planifolia
Hund05502 Selenicereus undatus
Lalb_Chr02g0144131 Lupinus albus
Lalb_Chr21g0307441 Lupinus albus
Lj3C845T4 Lonicera japonica
Lj5g0017773 Lotus japonicus
Lsat_1_v5_gn_2_58121 Lactuca sativa
Lsat_1_v5_gn_4_123461 Lactuca sativa
Lsat_1_v5_gn_4_87201 Lactuca sativa
Lsat_1_v5_gn_6_17661 Lactuca sativa
Lsat_1_v5_gn_7_114500 Lactuca sativa
Manes.04G161300 Manihot esculenta
Manes.11G000600 Manihot esculenta
Mapoly0011s0194 Marchantia polymorpha
MBI03_g13442_MAGBIO Magnolia biondii
MBI03_g13443_MAGBIO Magnolia biondii
MBI03_g13444_MAGBIO Magnolia biondii
MCO13G269 Micromonas commoda
MD16G1004600 Malus domestica
Medtr1g115230 Medicago truncatula
MELO3C011764.2 Cucumis melo
Migut.L00788 Erythranthe guttata
Migut.L00842 Erythranthe guttata
MSTRG.425 Avicennia marina
Nitab4.5_0000146g0170 Nicotiana tabacum
Nitab4.5_0000146g0180 Nicotiana tabacum
Nitab4.5_0003448g0010 Nicotiana tabacum
Nitab4.5_0003448g0020 Nicotiana tabacum
Nn4g25180 Nelumbo nucifera
Oeu027933.1 Olea europaea
Os06g0730600 Oryza sativa ssp. japonica
Peaxi162Scf00080g01316 Petunia axillaris
Peaxi162Scf00900g00011 Petunia axillaris
Peaxi162Scf00900g00016 Petunia axillaris
PGR142G2256 Punica granatum
Phvul.007G012500 Phaseolus vulgaris
Potri.007G001300 Populus trichocarpa
Pp3c5_13200 Physcomitrium patens
Pp3c6_15290 Physcomitrium patens
PRCOL_00006655 Prasinoderma coloniale
Prupe.1G351000 Prunus persica
Prupe.1G351200 Prunus persica
Psat6g235720 Pisum sativum
PSO017G4045 Papaver somniferum
PSO170G0691 Papaver somniferum
QL01p000364 Quercus lobata
QL01p000406 Quercus lobata
QL01p000509 Quercus lobata
QL01p000526 Quercus lobata
QL02p030564 Quercus lobata
RcHm_v2.0_Chr4g0447131 Rosa chinensis
RcHm_v2.0_Chr5g0037361 Rosa chinensis
Rhsim12G0073200 Rhododendron simsii
Sabra07G0001000 Salix brachista
SalBow1G1414 Salvia bowleyana
SalBow2G1760 Salvia bowleyana
Sc25g0001420 Simmondsia chinensis
Sed0005799 Sechium edule
Sed0013808 Sechium edule
Sed0021115 Sechium edule
SEGI_15512 Sequoiadendron giganteum
SEGI_23018 Sequoiadendron giganteum
SGA_v2.0_scaffold258G45742 Striga asiatica
SGA_v2.0_scaffold46G17331 Striga asiatica
SHI21178 Sapria himalayana
SMO146G0169 Selaginella moellendorffii
Solyc02g050240.4 Solanum lycopersicum
Solyc02g050260.2 Solanum lycopersicum
Sopen02g008530 Solanum pennellii
Sp1g37210 Schrenkiella parvula
TAR629G1676 Trochodendron aralioides
THA.LOC104815249 Tarenaya hassleriana
Thecc.02G152600 Theobroma cacao
Thhalv10011253m.g Eutrema salsugineum
TPR.G4142 Trifolium pratense
TWI53G1100 Tripterygium wilfordii
vmacro16217 Vaccinium macrocarpon
VMungo0720G2183 Vigna mungo
Zm00001eb271750 Zea mays

User provided reference genes

Program Settings