Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p02000 Brassica napus
A05p37030 Brassica napus
A10p24760 Brassica napus
Aa31sc127G30 Aethionema arabicum
Aa31sc153G80 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2422 Anthoceros agrestis
Actinidia03015 Actinidia chinensis
Actinidia25655 Actinidia chinensis
Actinidia38237 Actinidia chinensis
Ah.09g233850 Amaranthus hybridus
Ah.10g033100 Amaranthus hybridus
AL3G24020 Arabidopsis lyrata
AL6G24130 Arabidopsis lyrata
Aqoxy4G03156 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.23T474 Arachis hypogaea
AT3G12370 Arabidopsis thaliana
AT5G13510 Arabidopsis thaliana
ATR0594G228 Amborella trichopoda
Atru.chr12.612 Acer truncatum
AUR62003563 Chenopodium quinoa
AUR62017877 Chenopodium quinoa
AUR62027894 Chenopodium quinoa
AUR62036014 Chenopodium quinoa
AUR62043493 Chenopodium quinoa
BcaB01g05353 Brassica carinata
BcaC04g19111 Brassica carinata
BcaC05g29267 Brassica carinata
BcaC09g48234 Brassica carinata
BcaNung01147 Brassica carinata
BcaNung01889 Brassica carinata
BolC1t05226H Brassica oleracea
BolC2t06562H Brassica oleracea
BolC5t34212H Brassica oleracea
BolC9t59202H Brassica oleracea
BraA02t05172Z Brassica rapa
BraA05t22500Z Brassica rapa
BraA10t44539Z Brassica rapa
C01p52890 Brassica napus
C02p06210 Brassica napus
C05p55460 Brassica napus
C09p63590 Brassica napus
CAN.G186.30 Capsicum annuum
CANSAT35G1484 Cannabis sativa
CARHR086910 Cardamine hirsuta
CARHR199930 Cardamine hirsuta
Carub.0003s1173 Capsella rubella
Carub.0006s1167 Capsella rubella
Ca_21106_v3 Cicer arietinum L.
CBR_g32465 Chara braunii
Cc09_g02380 Coffea canephora
CDE02G4355 Ceratophyllum demersum
CDE09G1094 Ceratophyllum demersum
Cfa001576 Carpinus fangiana
Cfa013817 Carpinus fangiana
Ciclev10032705m.g Citrus clementina
CiPaw.02G177400 Carya illinoinensis
ClCG02G013790 Citrullus lanatus
COL.COLO4_23776 Corchorus olitorius
Cpa.g.sc1.279 Carica papaya
Cre06.g272850 Chlamydomonas reinhardtii
CsaV3_5G006380 Cucumis sativus L.
CSS0038055 Camellia sinensis var. sinensis
DCAR_019149 Daucus carota
Dinv31375 Davidia involucrata
Duzib106G0066 Durio zibethinus
ECA232G1287 Erigeron canadensis
EL10Ac6g15306 Beta vulgaris
FAN24G1009 Fragaria x ananassa
FvH4_2g21340 Fragaria vesca
Glyma.13G155300 Glycine max
Glyma.17G075900 Glycine max
Gohir.A05G298900 Gossypium hirsutum
Gohir.D05G298600 Gossypium hirsutum
Gorai.009G315800 Gossypium raimondii
GSVIVG01032650001 Vitis vinifera
HanXRQChr09g0247171 Helianthus annuus
Haze_16952 Corylus avellana
Haze_22491 Corylus avellana
Hma1.2p1_1893F.1_g306730 Hydrangea macrophylla
Hma1.2p1_2685F.1_g326920 Hydrangea macrophylla
HPP92_012064 Vanilla planifolia
HPP92_012074 Vanilla planifolia
Hund23274 Selenicereus undatus
Lalb_Chr07g0179691 Lupinus albus
Lalb_Chr13g0301081 Lupinus albus
Lj1P926T21 Lonicera japonica
Lj4g0017760 Lotus japonicus
Lsat_1_v5_gn_9_66541 Lactuca sativa
Manes.07G069200 Manihot esculenta
Mapoly0115s0051 Marchantia polymorpha
MBI05_g34749_MAGBIO Magnolia biondii
MBI05_g35481_MAGBIO Magnolia biondii
MD05G1196100 Malus domestica
MD10G1183400 Malus domestica
MD17G1117700 Malus domestica
Medtr3g058560 Medicago truncatula
Medtr4g131540 Medicago truncatula
MELO3C011720.2 Cucumis melo
MSTRG.9197 Avicennia marina
Nitab4.5_0000691g0220 Nicotiana tabacum
Nitab4.5_0004104g0080 Nicotiana tabacum
Nn2g10610 Nelumbo nucifera
Nn8g38769 Nelumbo nucifera
Oeu017240.1 Olea europaea
Os03g0284400 Oryza sativa ssp. japonica
Os05g0121500 Oryza sativa ssp. japonica
Peaxi162Scf00195g00083 Petunia axillaris
PGR031G1734 Punica granatum
PGSC0003DMG400032570 Solanum tuberosum
Phvul.004G002100 Phaseolus vulgaris
Potri.008G045800 Populus trichocarpa
Potri.010G215900 Populus trichocarpa
Pp3c11_2850 Physcomitrium patens
Pp3c1_1330 Physcomitrium patens
Pp3c2_35950 Physcomitrium patens
PRCOL_00005567 Prasinoderma coloniale
Prupe.8G222500 Prunus persica
Psat4g007600 Pisum sativum
PSO339G6228 Papaver somniferum
PSO384G3929 Papaver somniferum
QL08p057255 Quercus lobata
RcHm_v2.0_Chr6g0287931 Rosa chinensis
Rhsim03G0135900 Rhododendron simsii
Rhsim07G0202500 Rhododendron simsii
Sabra08G0032100 Salix brachista
Sabra10G0166900 Salix brachista
SalBow4G3080 Salvia bowleyana
Sc01g0005590 Simmondsia chinensis
Sc01g0009170 Simmondsia chinensis
Sc09g0006840 Simmondsia chinensis
Sc26g0002120 Simmondsia chinensis
Sed0009994 Sechium edule
SGA_v2.0_scaffold62G21448 Striga asiatica
SMO001G0016 Selaginella moellendorffii
SMO239G0117 Selaginella moellendorffii
SMO306G0014 Selaginella moellendorffii
Solyc04g009540.1 Solanum lycopersicum
Sopen04g004700 Solanum pennellii
Sp3g10560 Schrenkiella parvula
Sp6g30510 Schrenkiella parvula
TAR369G1054 Trochodendron aralioides
TAR633G0137 Trochodendron aralioides
THA.LOC104799364 Tarenaya hassleriana
THA.LOC104827313 Tarenaya hassleriana
Thecc.10G065300 Theobroma cacao
Thhalv10014625m.g Eutrema salsugineum
Thhalv10022434m.g Eutrema salsugineum
TPR.G37110 Trifolium pratense
TWI38G0010 Tripterygium wilfordii
unitig_46.g18586 Utricularia gibba
vmacro04881 Vaccinium macrocarpon
VMungo0464G0639 Vigna mungo
Zm00001eb013020 Zea mays
Zm00001eb342870 Zea mays
Zm00001eb355270 Zea mays
Zm00001eb397230 Zea mays

User provided reference genes

Program Settings