Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p27040 Brassica napus
Aa31LG9G12300 Aethionema arabicum
Actinidia15457 Actinidia chinensis
Ah.00g000700 Amaranthus hybridus
Ah.11g040130 Amaranthus hybridus
AL25U10020 Arabidopsis lyrata
AL8G19580 Arabidopsis lyrata
Aqoxy3G02289 Aquilegia oxysepala
Aqoxy5G01112 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.XEB2B9 Arachis hypogaea
AT5G42200 Arabidopsis thaliana
Atru.chr13.228 Acer truncatum
AUR62013893 Chenopodium quinoa
AUR62036701 Chenopodium quinoa
BcaB02g11383 Brassica carinata
BcaC03g16473 Brassica carinata
BraA02t07721Z Brassica rapa
C02p42820 Brassica napus
CANSAT25G1812 Cannabis sativa
CARHR184540 Cardamine hirsuta
Carub.0008s0710 Capsella rubella
Ca_13481_v3 Cicer arietinum L.
Ca_15471_v3 Cicer arietinum L.
Cc10_g01210 Coffea canephora
Cfa013998 Carpinus fangiana
Cfa014000 Carpinus fangiana
Ciclev10002708m.g Citrus clementina
CiPaw.07G144300 Carya illinoinensis
COL.COLO4_26096 Corchorus olitorius
Cpa.g.sc26.274 Carica papaya
CSS0026950 Camellia sinensis var. sinensis
CSS0030807 Camellia sinensis var. sinensis
CSS0050287 Camellia sinensis var. sinensis
DCAR_009508 Daucus carota
DCAR_016739 Daucus carota
Duzib093G0904 Durio zibethinus
Duzib116G0412 Durio zibethinus
ECA233G5046 Erigeron canadensis
ECA238G4114 Erigeron canadensis
EL10Ac1g02113 Beta vulgaris
Eucgr.L01280 Eucalyptus grandis
Eucgr.L01284 Eucalyptus grandis
FAN12G0929 Fragaria x ananassa
FAN15G1857 Fragaria x ananassa
FAN17G0724 Fragaria x ananassa
FAN20G1138 Fragaria x ananassa
FAN27G0508 Fragaria x ananassa
FvH4_2g38021 Fragaria vesca
FvH4_4g22111 Fragaria vesca
Glyma.04G021200 Glycine max
Glyma.06G021400 Glycine max
Glyma.14G221800 Glycine max
Glyma.17G260700 Glycine max
Gohir.A05G183900 Gossypium hirsutum
Gohir.A06G001300 Gossypium hirsutum
Gohir.D05G186600 Gossypium hirsutum
Gorai.009G191900 Gossypium raimondii
Gorai.010G001500 Gossypium raimondii
GSVIVG01008754001 Vitis vinifera
GSVIVG01008756001 Vitis vinifera
HanXRQChr12g0366761 Helianthus annuus
HanXRQChr13g0387001 Helianthus annuus
HanXRQChr14g0429591 Helianthus annuus
HanXRQChr14g0429601 Helianthus annuus
HanXRQChr15g0463381 Helianthus annuus
Haze_16142 Corylus avellana
Haze_16143 Corylus avellana
Haze_22691 Corylus avellana
Haze_22693 Corylus avellana
Hma1.2p1_0023F.1_g015760 Hydrangea macrophylla
Hma1.2p1_1598F.1_g292870 Hydrangea macrophylla
Lalb_Chr03g0033551 Lupinus albus
Lalb_Chr19g0131551 Lupinus albus
Lalb_Chr23g0266041 Lupinus albus
Lj1g0006199 Lotus japonicus
Lj1g0006329 Lotus japonicus
Lj4g0020541 Lotus japonicus
Lj4P800T16 Lonicera japonica
Lj5g0000916 Lotus japonicus
Lj5g0008708 Lotus japonicus
LjContig00564g0025705 Lotus japonicus
Lsat_1_v5_gn_2_7621 Lactuca sativa
Lsat_1_v5_gn_8_29501 Lactuca sativa
Manes.05G143500 Manihot esculenta
Manes.18G010000 Manihot esculenta
MBI05_g33955_MAGBIO Magnolia biondii
MBI05_g39400_MAGBIO Magnolia biondii
MD08G1008600 Malus domestica
MD15G1007400 Malus domestica
Medtr1g026070 Medicago truncatula
Medtr3g114500 Medicago truncatula
Migut.C00892 Erythranthe guttata
Migut.N01935 Erythranthe guttata
Nitab4.5_0000498g0070 Nicotiana tabacum
Nitab4.5_0001936g0020 Nicotiana tabacum
Nitab4.5_0002730g0010 Nicotiana tabacum
Nitab4.5_0004361g0050 Nicotiana tabacum
Nitab4.5_0004361g0080 Nicotiana tabacum
Nitab4.5_0004392g0020 Nicotiana tabacum
Nitab4.5_0005433g0010 Nicotiana tabacum
Nn1g05882 Nelumbo nucifera
Nn1g06293 Nelumbo nucifera
Nn1g08670 Nelumbo nucifera
Nn1g09075 Nelumbo nucifera
Nn5g30836 Nelumbo nucifera
Oeu014022.1 Olea europaea
Oeu026124.1 Olea europaea
Os02g0666900 Oryza sativa ssp. japonica
Os05g0426066 Oryza sativa ssp. japonica
Os06g0537600 Oryza sativa ssp. japonica
Peaxi162Scf00174g00056 Petunia axillaris
Peaxi162Scf00289g00074 Petunia axillaris
Peaxi162Scf00772g00016 Petunia axillaris
PGR083G1632 Punica granatum
PGSC0003DMG400009881 Solanum tuberosum
PGSC0003DMG400024652 Solanum tuberosum
PGSC0003DMG400029328 Solanum tuberosum
Phvul.001G003400 Phaseolus vulgaris
Phvul.009G019300 Phaseolus vulgaris
Potri.002G017400 Populus trichocarpa
Potri.005G244500 Populus trichocarpa
Prupe.1G360300 Prunus persica
Psat6g001320 Pisum sativum
PSO170G1116 Papaver somniferum
QL02p012665 Quercus lobata
QL12p005081 Quercus lobata
RcHm_v2.0_Chr6g0303581 Rosa chinensis
Rhsim06G0013000 Rhododendron simsii
Sabra02G0013900 Salix brachista
Sabra05G0189100 Salix brachista
Sc02g0008810 Simmondsia chinensis
Sc15g0004700 Simmondsia chinensis
SEGI_40924 Sequoiadendron giganteum
SGA_v2.0_scaffold145G36087 Striga asiatica
SGA_v2.0_scaffold292G47385 Striga asiatica
SMO143G0163 Selaginella moellendorffii
Solyc04g081890.1 Solanum lycopersicum
Solyc12g094385.1 Solanum lycopersicum
Sopen03g034470 Solanum pennellii
Sopen04g035520 Solanum pennellii
Sopen12g031270 Solanum pennellii
SpUn1114_0010 Schrenkiella parvula
THA.LOC104806061 Tarenaya hassleriana
THA.LOC104813221 Tarenaya hassleriana
Thecc.07G152300 Theobroma cacao
Thecc.08G050200 Theobroma cacao
TPR.G16964 Trifolium pratense
TPR.G26380 Trifolium pratense
TPR.G38204 Trifolium pratense
TPR.G38345 Trifolium pratense
TWI56G1323 Tripterygium wilfordii
VMungo0540G0733 Vigna mungo
VMungo0540G1381 Vigna mungo
VMungo0647G2197 Vigna mungo
VMungo1309G0612 Vigna mungo
Zm00001eb250010 Zea mays

User provided reference genes

Program Settings