Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p44920 Brassica napus
A09p10380 Brassica napus
Aa31sc61G60 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3612 Anthoceros agrestis
Actinidia06949 Actinidia chinensis
Actinidia06950 Actinidia chinensis
Actinidia16361 Actinidia chinensis
Ah.08g223290 Amaranthus hybridus
AL3G45260 Arabidopsis lyrata
Aqoxy2G00323 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.NTNX6Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U6ZXMA Arachis hypogaea
AT2G13360 Arabidopsis thaliana
ATR0721G062 Amborella trichopoda
Atru.chr3.2806 Acer truncatum
AUR62039836 Chenopodium quinoa
BcaB08g34528 Brassica carinata
BcaC01g03126 Brassica carinata
BcaC04g23083 Brassica carinata
BolC3t17861H Brassica oleracea
BolC9t54125H Brassica oleracea
BraA03t13629Z Brassica rapa
BraA09t36682Z Brassica rapa
C03p55800 Brassica napus
C09p12320 Brassica napus
CAN.G484.7 Capsicum annuum
CANSAT64G2455 Cannabis sativa
CARHR105160 Cardamine hirsuta
Carub.0003s2789 Capsella rubella
Ca_06224_v3 Cicer arietinum L.
Ca_13793_v3 Cicer arietinum L.
CBR_g39952 Chara braunii
Cc01_g05790 Coffea canephora
Cfa009835 Carpinus fangiana
Cfa022418 Carpinus fangiana
Ciclev10015490m.g Citrus clementina
CiPaw.13G152600 Carya illinoinensis
CiPaw.14G115100 Carya illinoinensis
ClCG02G022970 Citrullus lanatus
ClCG03G012880 Citrullus lanatus
COL.COLO4_07229 Corchorus olitorius
Cpa.g.sc892.2 Carica papaya
Cre01.g005150 Chlamydomonas reinhardtii
Cre06.g294650 Chlamydomonas reinhardtii
CsaV3_1G043170 Cucumis sativus L.
CsaV3_6G039090 Cucumis sativus L.
CSS0001177 Camellia sinensis var. sinensis
CSS0007609 Camellia sinensis var. sinensis
CSS0015379 Camellia sinensis var. sinensis
DCAR_002094 Daucus carota
DCAR_029980 Daucus carota
Dinv08771 Davidia involucrata
Dinv36191 Davidia involucrata
Duzib150G0360 Durio zibethinus
Duzib170G1108 Durio zibethinus
ECA233G2606 Erigeron canadensis
EL10Ac4g10172 Beta vulgaris
Eucgr.B03720 Eucalyptus grandis
FAN11G2969 Fragaria x ananassa
FAN16G1059 Fragaria x ananassa
FAN21G0985 Fragaria x ananassa
FAN25G1578 Fragaria x ananassa
FvH4_3g28090 Fragaria vesca
Glyma.08G302600 Glycine max
Glyma.18G116900 Glycine max
Gohir.A05G070800 Gossypium hirsutum
Gohir.A13G217500 Gossypium hirsutum
Gohir.D05G073700 Gossypium hirsutum
Gohir.D13G221100 Gossypium hirsutum
Gorai.009G074800 Gossypium raimondii
Gorai.013G252200 Gossypium raimondii
GSVIVG01037237001 Vitis vinifera
HanXRQChr12g0381201 Helianthus annuus
Haze_23202 Corylus avellana
Hma1.2p1_0115F.1_g056060 Hydrangea macrophylla
Hma1.2p1_0922F.1_g236910 Hydrangea macrophylla
HPP92_001014 Vanilla planifolia
Hund07449 Selenicereus undatus
Hund21989 Selenicereus undatus
Lalb_Chr14g0365141 Lupinus albus
Lalb_Chr17g0348031 Lupinus albus
Lj3A187G31 Lonicera japonica
Lj3C181G6 Lonicera japonica
Lj6g0016070 Lotus japonicus
LjContig00049g0014500 Lotus japonicus
Lsat_1_v5_gn_5_64980 Lactuca sativa
Manes.01G181700 Manihot esculenta
Manes.02G141600 Manihot esculenta
Mapoly0001s0436 Marchantia polymorpha
Mapoly0066s0091 Marchantia polymorpha
MBI13_g29527_MAGBIO Magnolia biondii
MD03G1168700 Malus domestica
MD11G1194500 Malus domestica
Medtr3g053890 Medicago truncatula
Medtr5g067370 Medicago truncatula
Medtr5g090070 Medicago truncatula
Medtr5g094410 Medicago truncatula
MELO3C014568.2 Cucumis melo
MELO3C015151.2 Cucumis melo
Migut.N02365 Erythranthe guttata
MSTRG.17628 Avicennia marina
Nitab4.5_0001925g0250 Nicotiana tabacum
Nitab4.5_0011805g0020 Nicotiana tabacum
Nn2g14932 Nelumbo nucifera
Oeu025899.1 Olea europaea
Oeu061291.1 Olea europaea
Os08g0502700 Oryza sativa ssp. japonica
Peaxi162Scf00062g00919 Petunia axillaris
PGR102G2835 Punica granatum
PGSC0003DMG400004652 Solanum tuberosum
Phvul.006G029100 Phaseolus vulgaris
Potri.001G253300 Populus trichocarpa
Potri.009G047700 Populus trichocarpa
Pp3c10_5790 Physcomitrium patens
Pp3c18_8240 Physcomitrium patens
Pp3c1_24350 Physcomitrium patens
Pp3c21_12100 Physcomitrium patens
PRCOL_00005046 Prasinoderma coloniale
Prupe.4G258800 Prunus persica
Psat2g019120 Pisum sativum
Psat4g095320 Pisum sativum
Psat4g095360 Pisum sativum
Psat5g194960 Pisum sativum
PSO339G5023 Papaver somniferum
PSO384G2058 Papaver somniferum
QL01p017697 Quercus lobata
RcHm_v2.0_Chr2g0084601 Rosa chinensis
RcHm_v2.0_Chr2g0095031 Rosa chinensis
RcHm_v2.0_Chr5g0050781 Rosa chinensis
RcHm_v2.0_Chr5g0076081 Rosa chinensis
Rhsim13G0215900 Rhododendron simsii
SalBow6G1637 Salvia bowleyana
Sc09g0000960 Simmondsia chinensis
Sed0008818 Sechium edule
Sed0009312 Sechium edule
Sed0026623 Sechium edule
SEGI_24220 Sequoiadendron giganteum
SGA_v2.0_scaffold3G01468 Striga asiatica
SMO117G0208 Selaginella moellendorffii
SMO228G0177 Selaginella moellendorffii
Solyc12g099930.2 Solanum lycopersicum
Sopen12g034550 Solanum pennellii
Sp3g26830 Schrenkiella parvula
TAR369G0837 Trochodendron aralioides
TAR623G1228 Trochodendron aralioides
THA.LOC104826484 Tarenaya hassleriana
Thecc.09G244100 Theobroma cacao
Thhalv10022711m.g Eutrema salsugineum
TPR.G19354 Trifolium pratense
TPR.G8487 Trifolium pratense
TWI75G1130 Tripterygium wilfordii
unitig_8.g2992 Utricularia gibba
vmacro04009 Vaccinium macrocarpon
VMungo0540G1800 Vigna mungo
Zm00001eb034260 Zea mays
Zm00001eb034320 Zea mays
Zm00001eb034570 Zea mays

User provided reference genes

Program Settings