Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p38330 Brassica napus
A09p04850 Brassica napus
Aa31LG11G8140 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4436 Anthoceros agrestis
Actinidia13352 Actinidia chinensis
Actinidia14254 Actinidia chinensis
Actinidia18462 Actinidia chinensis
Actinidia31558 Actinidia chinensis
Ah.13g071390 Amaranthus hybridus
AL8G23260 Arabidopsis lyrata
Aqoxy3G01635 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.H88EK8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NK7FC1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RG9184 Arachis hypogaea
AT5G49510 Arabidopsis thaliana
ATR0693G272 Amborella trichopoda
Atru.chr4.3046 Acer truncatum
AUR62016229 Chenopodium quinoa
AUR62039261 Chenopodium quinoa
BcaB04g19615 Brassica carinata
BcaC04g23736 Brassica carinata
BolC7t44524H Brassica oleracea
BolC9t53449H Brassica oleracea
BraA06t26747Z Brassica rapa
BraA09t36122Z Brassica rapa
C07p39920 Brassica napus
C09p05230 Brassica napus
CAN.G945.3 Capsicum annuum
CANSAT78G0850 Cannabis sativa
CARHR287830 Cardamine hirsuta
Carub.0008s0936 Capsella rubella
Ca_00969_v3 Cicer arietinum L.
CBR_g12436 Chara braunii
Cc03_g00680 Coffea canephora
CDE01G0033 Ceratophyllum demersum
CDE12G0495 Ceratophyllum demersum
Cfa015290 Carpinus fangiana
Ciclev10005911m.g Citrus clementina
CiPaw.01G136700 Carya illinoinensis
CiPaw.02G073600 Carya illinoinensis
ClCG05G006650 Citrullus lanatus
COL.COLO4_34588 Corchorus olitorius
Cpa.g.sc9.38 Carica papaya
Cre06.g261650 Chlamydomonas reinhardtii
CsaV3_3G015280 Cucumis sativus L.
CSS0027180 Camellia sinensis var. sinensis
CSS0047955 Camellia sinensis var. sinensis
DCAR_026989 Daucus carota
Dinv15146 Davidia involucrata
Dinv44270 Davidia involucrata
Duzib052G1161 Durio zibethinus
Duzib151G0878 Durio zibethinus
ECA233G2476 Erigeron canadensis
EL10Ac3g05527 Beta vulgaris
Eucgr.D01575 Eucalyptus grandis
Eucgr.D01577 Eucalyptus grandis
Eucgr.D01580 Eucalyptus grandis
Eucgr.D01581 Eucalyptus grandis
Eucgr.D01586 Eucalyptus grandis
Eucgr.D01598 Eucalyptus grandis
Eucgr.E01978 Eucalyptus grandis
Eucgr.E01982 Eucalyptus grandis
Eucgr.E01999 Eucalyptus grandis
Eucgr.E02007 Eucalyptus grandis
FAN07G0536 Fragaria x ananassa
FAN12G3971 Fragaria x ananassa
FvH4_4g20250 Fragaria vesca
Glyma.07G238200 Glycine max
Glyma.09G034400 Glycine max
Glyma.15G139100 Glycine max
Glyma.17G035301 Glycine max
Gohir.A01G034900 Gossypium hirsutum
Gohir.D01G023556 Gossypium hirsutum
Gorai.002G030800 Gossypium raimondii
GSVIVG01034969001 Vitis vinifera
HanXRQChr17g0569361 Helianthus annuus
Haze_01324 Corylus avellana
Haze_26161 Corylus avellana
Hma1.2p1_0013F.1_g008360 Hydrangea macrophylla
HPP92_017247 Vanilla planifolia
HPP92_017255 Vanilla planifolia
HPP92_027563 Vanilla planifolia
Hund03133 Selenicereus undatus
Hund11985 Selenicereus undatus
Lalb_Chr12g0200831 Lupinus albus
Lalb_Chr13g0298551 Lupinus albus
Lj3A833G34 Lonicera japonica
Lj6g0013793 Lotus japonicus
Lsat_1_v5_gn_1_117981 Lactuca sativa
Manes.03G206300 Manihot esculenta
Mapoly0057s0039 Marchantia polymorpha
MBI14_g36884_MAGBIO Magnolia biondii
MBI19_g03261_MAGBIO Magnolia biondii
MCO08G322 Micromonas commoda
MD13G1150800 Malus domestica
MD16G1151300 Malus domestica
Medtr2g033830 Medicago truncatula
MELO3C006723.2 Cucumis melo
Migut.N00036 Erythranthe guttata
MSTRG.24825 Avicennia marina
MSTRG.3849 Avicennia marina
Nitab4.5_0000177g0050 Nicotiana tabacum
Nitab4.5_0000647g0250 Nicotiana tabacum
Nitab4.5_0000891g0010 Nicotiana tabacum
Nitab4.5_0004165g0020 Nicotiana tabacum
Nn3g21742 Nelumbo nucifera
Oeu001162.1 Olea europaea
Os12g0562900 Oryza sativa ssp. japonica
Peaxi162Scf00228g00059 Petunia axillaris
PGR004G2019 Punica granatum
PGSC0003DMG400027209 Solanum tuberosum
Phvul.006G119000 Phaseolus vulgaris
Potri.008G103400 Populus trichocarpa
Potri.010G147600 Populus trichocarpa
Pp3c8_18130 Physcomitrium patens
PRCOL_00000812 Prasinoderma coloniale
Prupe.1G115000 Prunus persica
Psat1g162400 Pisum sativum
PSO063G1209 Papaver somniferum
PSO421G0271 Papaver somniferum
PSO724G0368 Papaver somniferum
PSO832G3679 Papaver somniferum
QL06p012730 Quercus lobata
QL06p012738 Quercus lobata
RcHm_v2.0_Chr4g0425791 Rosa chinensis
Rhsim02G0002800 Rhododendron simsii
Sabra08G0078100 Salix brachista
Sabra10G0113800 Salix brachista
SalBow5G2618 Salvia bowleyana
Sc25g0003210 Simmondsia chinensis
Sed0016650 Sechium edule
Sed0024233 Sechium edule
SEGI_09014 Sequoiadendron giganteum
SGA_v2.0_scaffold528G52737 Striga asiatica
SMO116G0307 Selaginella moellendorffii
Solyc01g058597.1 Solanum lycopersicum
Solyc05g053390.4 Solanum lycopersicum
Sopen01g024490 Solanum pennellii
Sopen05g031900 Solanum pennellii
Sp2g19810 Schrenkiella parvula
SpUn0021_0040 Schrenkiella parvula
TAR362G0217 Trochodendron aralioides
TAR633G1272 Trochodendron aralioides
THA.LOC104802708 Tarenaya hassleriana
THA.LOC104827099 Tarenaya hassleriana
Thecc.04G303800 Theobroma cacao
Thhalv10004957m.g Eutrema salsugineum
TPR.G25439 Trifolium pratense
TPR.G28959 Trifolium pratense
TPR.G30807 Trifolium pratense
TWI09G1034 Tripterygium wilfordii
TWI73G0086 Tripterygium wilfordii
unitig_0.g2580 Utricularia gibba
vmacro15176 Vaccinium macrocarpon
VMungo0540G0568 Vigna mungo
Zm00001eb028520 Zea mays
Zm00001eb136920 Zea mays

User provided reference genes

Program Settings