Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p30820 Brassica napus
A07p37570 Brassica napus
Aa31LG4G9290 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2359 Anthoceros agrestis
Actinidia06460 Actinidia chinensis
Actinidia26154 Actinidia chinensis
Ah.04g162670 Amaranthus hybridus
AL2G30830 Arabidopsis lyrata
Aqoxy5G02635 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6LDV6M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IR21Q7 Arachis hypogaea
AT1G71220 Arabidopsis thaliana
ATR1136G197 Amborella trichopoda
Atru.chr3.1599 Acer truncatum
Atru.chr3.1607 Acer truncatum
Atru.chr6.584 Acer truncatum
AUR62037329 Chenopodium quinoa
AUR62042597 Chenopodium quinoa
BcaB03g14879 Brassica carinata
BcaB03g14881 Brassica carinata
BcaC08g46557 Brassica carinata
BolC6t39589H Brassica oleracea
BraA07t30719Z Brassica rapa
BraA07t31318Z Brassica rapa
C06p45330 Brassica napus
CAN.G798.12 Capsicum annuum
CAN.G798.13 Capsicum annuum
CANSAT11G1101 Cannabis sativa
CARHR064520 Cardamine hirsuta
Carub.0002s1810 Capsella rubella
Ca_00071_v3 Cicer arietinum L.
CBR_g48619 Chara braunii
Cc02_g22690 Coffea canephora
Cc02_g22700 Coffea canephora
CDE06G0802 Ceratophyllum demersum
Cfa005504 Carpinus fangiana
Cfa024915 Carpinus fangiana
Ciclev10000024m.g Citrus clementina
CiPaw.06G146300 Carya illinoinensis
ClCG05G009570 Citrullus lanatus
ClCG05G009590 Citrullus lanatus
COL.COLO4_11778 Corchorus olitorius
Cpa.g.sc30.3 Carica papaya
Cpa.g.sc30.4 Carica papaya
Cpa.g.sc30.5 Carica papaya
Cpa.g.sc791.3 Carica papaya
Cre05.g233303 Chlamydomonas reinhardtii
CsaV3_3G019150 Cucumis sativus L.
CSS0042528 Camellia sinensis var. sinensis
DCAR_006698 Daucus carota
Dinv19381 Davidia involucrata
Dinv24296 Davidia involucrata
Duzib132G0461 Durio zibethinus
Duzib132G0509 Durio zibethinus
Duzib132G0723 Durio zibethinus
Duzib248G1637 Durio zibethinus
ECA233G0288 Erigeron canadensis
ECA240G1790 Erigeron canadensis
EL10Ac4g08781 Beta vulgaris
Eucgr.H01552 Eucalyptus grandis
Eucgr.H01580 Eucalyptus grandis
Eucgr.I02739 Eucalyptus grandis
FAN04G3000 Fragaria x ananassa
FAN08G0197 Fragaria x ananassa
FAN13G2190 Fragaria x ananassa
FAN18G2119 Fragaria x ananassa
FvH4_5g28990 Fragaria vesca
Glyma.05G168600 Glycine max
Glyma.08G127200 Glycine max
Glyma.08G187500 Glycine max
Gohir.A04G121300 Gossypium hirsutum
Gohir.A12G027900 Gossypium hirsutum
Gohir.D04G163800 Gossypium hirsutum
Gohir.D12G027400 Gossypium hirsutum
Gohir.D12G027466 Gossypium hirsutum
Gohir.D12G027532 Gossypium hirsutum
Gorai.008G027900 Gossypium raimondii
Gorai.008G028000 Gossypium raimondii
Gorai.012G151700 Gossypium raimondii
GSVIVG01022867001 Vitis vinifera
HanXRQChr09g0249001 Helianthus annuus
Haze_01738 Corylus avellana
Hma1.2p1_0217F.1_g092200 Hydrangea macrophylla
Hma1.2p1_0217F.1_g092210 Hydrangea macrophylla
HPP92_015204 Vanilla planifolia
Lalb_Chr13g0295701 Lupinus albus
Lalb_Chr20g0123541 Lupinus albus
Lalb_Chr20g0123551 Lupinus albus
Lalb_Chr23g0273611 Lupinus albus
Lj5A253T35 Lonicera japonica
Lj5C253T9 Lonicera japonica
Lj6g0024422 Lotus japonicus
Lsat_1_v5_gn_9_118481 Lactuca sativa
Manes.10G121900 Manihot esculenta
Mapoly0156s0022 Marchantia polymorpha
MCO01G725 Micromonas commoda
MD08G1235900 Malus domestica
MD15G1427500 Malus domestica
Medtr2g006960 Medicago truncatula
MELO3C019456.2 Cucumis melo
Migut.B00820 Erythranthe guttata
MSTRG.20304 Avicennia marina
Nitab4.5_0000816g0140 Nicotiana tabacum
Nitab4.5_0008466g0010 Nicotiana tabacum
Nn1g08409 Nelumbo nucifera
Oeu027795.2 Olea europaea
Os02g0664100 Oryza sativa ssp. japonica
Os02g0664200 Oryza sativa ssp. japonica
Peaxi162Scf00011g00526 Petunia axillaris
PGR142G1992 Punica granatum
Phvul.006G215600 Phaseolus vulgaris
Potri.003G018900 Populus trichocarpa
Pp3c3_14060 Physcomitrium patens
PRCOL_00004479 Prasinoderma coloniale
Prupe.1G572000 Prunus persica
Psat0s1016g0040 Pisum sativum
Psat0s3298g0040 Pisum sativum
Psat0s4378g0040 Pisum sativum
Psat1g072720 Pisum sativum
Psat1g073840 Pisum sativum
Psat1g220480 Pisum sativum
Psat1g220520 Pisum sativum
Psat3g186600 Pisum sativum
Psat5g210280 Pisum sativum
Psat5g210320 Pisum sativum
Psat6g132920 Pisum sativum
Psat6g235600 Pisum sativum
Psat7g198480 Pisum sativum
Psat7g198520 Pisum sativum
Psat7g240960 Pisum sativum
PSO017G4515 Papaver somniferum
PSO170G2453 Papaver somniferum
QL02p099301 Quercus lobata
RcHm_v2.0_Chr7g0221551 Rosa chinensis
Rhsim05G0119800 Rhododendron simsii
Sabra03G0010400 Salix brachista
SalBow7G4621 Salvia bowleyana
Sc02g0002740 Simmondsia chinensis
Sed0005890 Sechium edule
SEGI_03237 Sequoiadendron giganteum
SGA_v2.0_scaffold110G31335 Striga asiatica
SHI16668 Sapria himalayana
SMO276G0030 Selaginella moellendorffii
Solyc01g104040.4 Solanum lycopersicum
Sopen01g046450 Solanum pennellii
Sp5g26380 Schrenkiella parvula
TAR381G0967 Trochodendron aralioides
THA.LOC104801984 Tarenaya hassleriana
Thecc.02G088500 Theobroma cacao
Thhalv10018004m.g Eutrema salsugineum
TPR.G2085 Trifolium pratense
TWI14G0038 Tripterygium wilfordii
unitig_749.g14125 Utricularia gibba
unitig_749.g14126 Utricularia gibba
vmacro19883 Vaccinium macrocarpon
VMungo0540G0442 Vigna mungo
Zm00001eb258320 Zea mays

User provided reference genes

Program Settings