Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p37770 Brassica napus
A05p36770 Brassica napus
A05p36780 Brassica napus
AL3G24380 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.PKTL6M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R2EV68 Arachis hypogaea
AT3G12700 Arabidopsis thaliana
ATR0737G058 Amborella trichopoda
Atru.chr1.11 Acer truncatum
AUR62039172 Chenopodium quinoa
AUR62043016 Chenopodium quinoa
BcaB04g18716 Brassica carinata
BcaB06g25520 Brassica carinata
BcaB06g25521 Brassica carinata
BcaB06g25522 Brassica carinata
BcaB07g30032 Brassica carinata
BcaC01g04030 Brassica carinata
BcaC05g29245 Brassica carinata
BcaC05g29246 Brassica carinata
BNapus_Darmor_BZH_scaffold_149p00230 Brassica napus
BolC1t05185H Brassica oleracea
BolC3t16859H Brassica oleracea
BolC5t34189H Brassica oleracea
BolC5t34190H Brassica oleracea
BraA01t04114Z Brassica rapa
BraA03t12932Z Brassica rapa
BraA05t22480Z Brassica rapa
BraA05t22481Z Brassica rapa
C01p52470 Brassica napus
C03p45840 Brassica napus
C05p55210 Brassica napus
C05p55220 Brassica napus
CANSAT35G0824 Cannabis sativa
CANSAT56G0190 Cannabis sativa
CARHR087220 Cardamine hirsuta
Carub.0003s1206 Capsella rubella
Ca_03340_v3 Cicer arietinum L.
CDE02G1681 Ceratophyllum demersum
CDE06G2224 Ceratophyllum demersum
CDE10G0580 Ceratophyllum demersum
CDE10G0597 Ceratophyllum demersum
Cfa017773 Carpinus fangiana
Ciclev10004908m.g Citrus clementina
Ciclev10013820m.g Citrus clementina
CiPaw.15G111300 Carya illinoinensis
ClCG02G018840 Citrullus lanatus
COL.COLO4_20011 Corchorus olitorius
COL.COLO4_32269 Corchorus olitorius
Cpa.g.sc31.35 Carica papaya
CsaV3_6G013340 Cucumis sativus L.
DCAR_016854 Daucus carota
Dinv42451 Davidia involucrata
Duzib133G1074 Durio zibethinus
Duzib187G1374 Durio zibethinus
Duzib211G0547 Durio zibethinus
Duzib213G0570 Durio zibethinus
EL10Ac2g03241 Beta vulgaris
EL10Ac2g03242 Beta vulgaris
Eucgr.F04481 Eucalyptus grandis
FAN04G1113 Fragaria x ananassa
FAN08G1931 Fragaria x ananassa
FAN08G3134 Fragaria x ananassa
FAN11G0248 Fragaria x ananassa
FAN13G0410 Fragaria x ananassa
FAN13G2946 Fragaria x ananassa
FAN16G1527 Fragaria x ananassa
FAN18G0351 Fragaria x ananassa
FAN18G0983 Fragaria x ananassa
FAN21G3589 Fragaria x ananassa
FAN25G0076 Fragaria x ananassa
FAN25G3209 Fragaria x ananassa
FvH4_3g13820 Fragaria vesca
FvH4_5g37920 Fragaria vesca
Glyma.08G162100 Glycine max
Glyma.15G265500 Glycine max
Gohir.A07G169600 Gossypium hirsutum
Gohir.A11G148800 Gossypium hirsutum
Gohir.A13G127600 Gossypium hirsutum
Gohir.D07G176000 Gossypium hirsutum
Gohir.D11G155800 Gossypium hirsutum
Gohir.D13G131300 Gossypium hirsutum
Gorai.001G196900 Gossypium raimondii
Gorai.007G166000 Gossypium raimondii
Gorai.013G147300 Gossypium raimondii
GSVIVG01036694001 Vitis vinifera
Haze_18463 Corylus avellana
Hma1.2p1_0151F.1_g066920 Hydrangea macrophylla
HPP92_020194 Vanilla planifolia
HPP92_021501 Vanilla planifolia
HPP92_021518 Vanilla planifolia
Lalb_Chr20g0108341 Lupinus albus
Lalb_Chr25g0284151 Lupinus albus
Lj3g0027412 Lotus japonicus
Manes.14G032900 Manihot esculenta
MBI07_g30166_MAGBIO Magnolia biondii
MD05G1240800 Malus domestica
MD10G1219200 Malus domestica
Medtr2g063110 Medicago truncatula
MELO3C019610.2 Cucumis melo
Migut.M01492 Erythranthe guttata
MSTRG.14573 Avicennia marina
MSTRG.16080 Avicennia marina
MSTRG.7100 Avicennia marina
Nn1g09863 Nelumbo nucifera
Nn1g09864 Nelumbo nucifera
Nn1g09865 Nelumbo nucifera
Nn7g38010 Nelumbo nucifera
Oeu019342.1 Olea europaea
Oeu019751.1 Olea europaea
Oeu029456.1 Olea europaea
Oeu044442.1 Olea europaea
Oeu049579.1 Olea europaea
Os01g0679500 Oryza sativa ssp. japonica
Os01g0679550 Oryza sativa ssp. japonica
Os05g0557100 Oryza sativa ssp. japonica
PGR031G2339 Punica granatum
Phvul.005G045500 Phaseolus vulgaris
Prupe.4G124800 Prunus persica
Psat1g015960 Pisum sativum
PSO541G5080 Papaver somniferum
PSO675G7716 Papaver somniferum
QL04p064749 Quercus lobata
QL04p064810 Quercus lobata
QL04p096020 Quercus lobata
QL04p096211 Quercus lobata
RcHm_v2.0_Chr5g0023001 Rosa chinensis
RcHm_v2.0_Chr5g0023011 Rosa chinensis
RcHm_v2.0_Chr7g0239861 Rosa chinensis
SalBow8G0150 Salvia bowleyana
Sc09g0007770 Simmondsia chinensis
Sed0012612 Sechium edule
SGA_v2.0_scaffold49G18209 Striga asiatica
SGA_v2.0_scaffold7G03638 Striga asiatica
SHI33387 Sapria himalayana
SHI49933 Sapria himalayana
SHI49934 Sapria himalayana
SHI49957 Sapria himalayana
SHI49958 Sapria himalayana
Sp3g10860 Schrenkiella parvula
TAR626G0167 Trochodendron aralioides
TAR627G0410 Trochodendron aralioides
THA.LOC104816068 Tarenaya hassleriana
Thecc.01G176300 Theobroma cacao
Thecc.07G193500 Theobroma cacao
Thhalv10020732m.g Eutrema salsugineum
TPR.G3631 Trifolium pratense
TWI32G0861 Tripterygium wilfordii
TWI38G1328 Tripterygium wilfordii
TWI38G2337 Tripterygium wilfordii
TWI60G0330 Tripterygium wilfordii
unitig_46.g18512 Utricularia gibba
VMungo1080G1112 Vigna mungo
Zm00001eb156780 Zea mays
Zm00001eb295430 Zea mays
Zm00001eb295440 Zea mays
Zm00001eb343260 Zea mays
Zm00001eb360360 Zea mays

User provided reference genes

Program Settings