Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p18410 Brassica napus
A05p12640 Brassica napus
Aa31LG5G4640 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.751 Anthoceros agrestis
Actinidia10802 Actinidia chinensis
Ah.01g004130 Amaranthus hybridus
AL120U10020 Arabidopsis lyrata
AL4G28510 Arabidopsis lyrata
AL7G46590 Arabidopsis lyrata
AL7G46610 Arabidopsis lyrata
Aqoxy2G01628 Aquilegia oxysepala
Aqoxy4G01985 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1MU1EY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.71GTDD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DQ148B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N045ZR Arachis hypogaea
AT2G32980 Arabidopsis thaliana
ATR0051G053 Amborella trichopoda
Atru.chr6.3251 Acer truncatum
AUR62018128 Chenopodium quinoa
AUR62034461 Chenopodium quinoa
BcaB01g03956 Brassica carinata
BcaB02g10513 Brassica carinata
BcaC01g05879 Brassica carinata
BcaC02g11365 Brassica carinata
BolC3t14537H Brassica oleracea
BolC4t23201H Brassica oleracea
BraA03t11104Z Brassica rapa
BraA05t20202Z Brassica rapa
C03p21500 Brassica napus
C04p16530 Brassica napus
CAN.G466.2 Capsicum annuum
CANSAT64G0134 Cannabis sativa
CARHR126930 Cardamine hirsuta
Carub.0004s1443 Capsella rubella
Ca_24113_v3 Cicer arietinum L.
CBR_g58792 Chara braunii
Cc04_g08550 Coffea canephora
CDE05G2122 Ceratophyllum demersum
Ciclev10016078m.g Citrus clementina
CiPaw.03G155600 Carya illinoinensis
CiPaw.04G110900 Carya illinoinensis
ClCG02G018050 Citrullus lanatus
COL.COLO4_21869 Corchorus olitorius
Cpa.g.sc132.18 Carica papaya
CsaV3_6G015340 Cucumis sativus L.
CSS0021334 Camellia sinensis var. sinensis
CSS0041882 Camellia sinensis var. sinensis
CSS0044911 Camellia sinensis var. sinensis
DCAR_021142 Daucus carota
DCAR_027885 Daucus carota
Dinv08724 Davidia involucrata
Duzib133G1216 Durio zibethinus
ECA234G0510 Erigeron canadensis
EL10Ac7g17335 Beta vulgaris
Eucgr.K00758 Eucalyptus grandis
FAN02G2244 Fragaria x ananassa
FAN05G0363 Fragaria x ananassa
FAN09G2083 Fragaria x ananassa
FAN09G3372 Fragaria x ananassa
FAN14G2961 Fragaria x ananassa
FvH4_6g42360 Fragaria vesca
Glyma.10G243100 Glycine max
Glyma.20G151100 Glycine max
Gohir.A07G187100 Gossypium hirsutum
Gohir.D07G193600 Gossypium hirsutum
Gohir.D10G109450 Gossypium hirsutum
Gohir.D10G162700 Gossypium hirsutum
Gorai.001G216700 Gossypium raimondii
Gorai.011G120100 Gossypium raimondii
GSVIVG01030499001 Vitis vinifera
HanXRQChr03g0076011 Helianthus annuus
HanXRQChr10g0306541 Helianthus annuus
HanXRQChr12g0373651 Helianthus annuus
Haze_12771 Corylus avellana
Hma1.2p1_0177F.1_g078020 Hydrangea macrophylla
HPP92_013545 Vanilla planifolia
HPP92_013591 Vanilla planifolia
HPP92_013592 Vanilla planifolia
Hund12365 Selenicereus undatus
Hund15353 Selenicereus undatus
Lj1A780G55 Lonicera japonica
Lj5g0014275 Lotus japonicus
Lsat_1_v5_gn_5_124360 Lactuca sativa
Lsat_1_v5_gn_9_105760 Lactuca sativa
Manes.12G070000 Manihot esculenta
Manes.13G066400 Manihot esculenta
Mapoly0045s0122 Marchantia polymorpha
MBI15_g08964_MAGBIO Magnolia biondii
MD09G1113600 Malus domestica
MD17G1103700 Malus domestica
Medtr1g102640 Medicago truncatula
Medtr2g005760 Medicago truncatula
Medtr4g068700 Medicago truncatula
MELO3C019739.2 Cucumis melo
Migut.H01332 Erythranthe guttata
Migut.L01518 Erythranthe guttata
Nitab4.5_0000185g0270 Nicotiana tabacum
Nitab4.5_0000242g0090 Nicotiana tabacum
Nitab4.5_0005035g0030 Nicotiana tabacum
Nitab4.5_0008425g0010 Nicotiana tabacum
Nn1g08031 Nelumbo nucifera
Nn6g32193 Nelumbo nucifera
Nn6g33383 Nelumbo nucifera
Nn6g33384 Nelumbo nucifera
Oeu008952.2 Olea europaea
Oeu040086.1 Olea europaea
Os08g0204800 Oryza sativa ssp. japonica
Peaxi162Scf00075g01538 Petunia axillaris
Peaxi162Scf00102g00840 Petunia axillaris
PGR142G4169 Punica granatum
Phvul.007G062600 Phaseolus vulgaris
Potri.002G225100 Populus trichocarpa
Potri.014G158000 Populus trichocarpa
Pp3c6_19990 Physcomitrium patens
Prupe.3G211000 Prunus persica
Psat6g203400 Pisum sativum
Psat7g206840 Pisum sativum
PSO339G1796 Papaver somniferum
PSO339G5690 Papaver somniferum
PSO384G1091 Papaver somniferum
PSO384G1132 Papaver somniferum
PSO384G3673 Papaver somniferum
QL08p030801 Quercus lobata
RcHm_v2.0_Chr1g0329411 Rosa chinensis
RcHm_v2.0_Chr1g0361251 Rosa chinensis
RcHm_v2.0_Chr2g0158191 Rosa chinensis
RcHm_v2.0_Chr2g0158231 Rosa chinensis
RcHm_v2.0_Chr2g0158241 Rosa chinensis
RcHm_v2.0_Chr2g0158271 Rosa chinensis
Rhsim04G0050700 Rhododendron simsii
Sabra02G0172100 Salix brachista
Sabra14G0120000 Salix brachista
Sc12g0002080 Simmondsia chinensis
Sed0009821 Sechium edule
Sed0012432 Sechium edule
SEGI_00177 Sequoiadendron giganteum
SGA_v2.0_scaffold106G30667 Striga asiatica
SGA_v2.0_scaffold51G18651 Striga asiatica
SMO340G0284 Selaginella moellendorffii
Solyc08g013990.3 Solanum lycopersicum
Sopen08g004840 Solanum pennellii
Sopen08g004850 Solanum pennellii
Sp4g15340 Schrenkiella parvula
TAR624G0840 Trochodendron aralioides
TAR626G1663 Trochodendron aralioides
TAR636G0182 Trochodendron aralioides
THA.LOC104816035 Tarenaya hassleriana
THA.LOC104826135 Tarenaya hassleriana
Thecc.01G181500 Theobroma cacao
Thhalv10016881m.g Eutrema salsugineum
TWI18G1088 Tripterygium wilfordii
TWI36G1393 Tripterygium wilfordii
unitig_0.g926 Utricularia gibba
vmacro09357 Vaccinium macrocarpon
vmacro12662 Vaccinium macrocarpon
VMungo0720G1040 Vigna mungo
Zm00001eb413680 Zea mays

User provided reference genes

Program Settings