Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p08730 Brassica napus
A09p63520 Brassica napus
Aa31LG1G1850 Aethionema arabicum
Actinidia19533 Actinidia chinensis
Ah.02g128690 Amaranthus hybridus
AL1G24570 Arabidopsis lyrata
Aqoxy3G01996 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.65DI7F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C4QHPC Arachis hypogaea
AT1G12930 Arabidopsis thaliana
ATR0582G201 Amborella trichopoda
Atru.chr6.2747 Acer truncatum
AUR62017451 Chenopodium quinoa
AUR62032520 Chenopodium quinoa
BcaB08g34240 Brassica carinata
BcaC05g25140 Brassica carinata
BcaC05g25411 Brassica carinata
BolC5t29778H Brassica oleracea
BolC5t30034H Brassica oleracea
BolC8t52241H Brassica oleracea
BraA06t24070Z Brassica rapa
BraA09t41703Z Brassica rapa
C05p10320 Brassica napus
C05p12870 Brassica napus
C08p47020 Brassica napus
CAN.G473.166 Capsicum annuum
CAN.G473.167 Capsicum annuum
CANSAT64G1951 Cannabis sativa
CARHR013280 Cardamine hirsuta
Carub.0001s1270 Capsella rubella
Ca_08243_v3 Cicer arietinum L.
CBR_g30317 Chara braunii
Cc07_g01490 Coffea canephora
CDE05G0125 Ceratophyllum demersum
Ciclev10014134m.g Citrus clementina
CiPaw.03G079200 Carya illinoinensis
ClCG05G012380 Citrullus lanatus
ClCG05G012390 Citrullus lanatus
COL.COLO4_13413 Corchorus olitorius
Cpa.g.sc70.26 Carica papaya
Cpa.g.sc70.28 Carica papaya
CsaV3_3G020140 Cucumis sativus L.
CSS0025073 Camellia sinensis var. sinensis
DCAR_000957 Daucus carota
DCAR_000958 Daucus carota
DCAR_010349 Daucus carota
DCAR_029488 Daucus carota
DCAR_032217 Daucus carota
Dinv00562 Davidia involucrata
Duzib138G0185 Durio zibethinus
ECA246G3450 Erigeron canadensis
EL10Ac6g13922 Beta vulgaris
Eucgr.G01904 Eucalyptus grandis
Eucgr.H05015 Eucalyptus grandis
FAN03G2103 Fragaria x ananassa
FAN04G2314 Fragaria x ananassa
FAN04G2467 Fragaria x ananassa
FAN05G2313 Fragaria x ananassa
FAN14G5433 Fragaria x ananassa
FAN14G5757 Fragaria x ananassa
FAN25G2039 Fragaria x ananassa
FAN27G2264 Fragaria x ananassa
FvH4_6g54490 Fragaria vesca
Glyma.04G126700 Glycine max
Glyma.09G128151 Glycine max
Glyma.16G044400 Glycine max
Glyma.19G107500 Glycine max
Gohir.A08G038200 Gossypium hirsutum
Gohir.D08G048400 Gossypium hirsutum
Gorai.004G047900 Gossypium raimondii
GSVIVG01031683001 Vitis vinifera
GSVIVG01032937001 Vitis vinifera
HanXRQChr13g0414341 Helianthus annuus
HanXRQChr17g0550851 Helianthus annuus
Haze_14336 Corylus avellana
Haze_14337 Corylus avellana
HPP92_021630 Vanilla planifolia
HPP92_021631 Vanilla planifolia
HPP92_021688 Vanilla planifolia
HPP92_021715 Vanilla planifolia
HPP92_021716 Vanilla planifolia
Hund04150 Selenicereus undatus
Lalb_Chr14g0364241 Lupinus albus
Lj1g0002000 Lotus japonicus
Lj7A620G39 Lonicera japonica
Lj7A620G41 Lonicera japonica
Lj7A620G42 Lonicera japonica
Lj7C620T11 Lonicera japonica
Lsat_1_v5_gn_3_103380 Lactuca sativa
Manes.04G095500 Manihot esculenta
Mapoly0055s0098 Marchantia polymorpha
MBI07_g11062_MAGBIO Magnolia biondii
MD09G1000300 Malus domestica
Medtr7g084880 Medicago truncatula
MELO3C014745.2 Cucumis melo
Migut.F00007 Erythranthe guttata
MSTRG.3036 Avicennia marina
Nitab4.5_0000136g0080 Nicotiana tabacum
Nitab4.5_0000519g0370 Nicotiana tabacum
Nitab4.5_0000519g0380 Nicotiana tabacum
Nitab4.5_0000519g0390 Nicotiana tabacum
Nitab4.5_0000519g0400 Nicotiana tabacum
Nitab4.5_0002901g0050 Nicotiana tabacum
Nitab4.5_0002901g0060 Nicotiana tabacum
Nitab4.5_0002901g0070 Nicotiana tabacum
Nitab4.5_0005199g0050 Nicotiana tabacum
Nitab4.5_0028800g0010 Nicotiana tabacum
Nn4g22026 Nelumbo nucifera
Oeu062515.1 Olea europaea
Os11g0543800 Oryza sativa ssp. japonica
Peaxi162Scf00082g00223 Petunia axillaris
Peaxi162Scf00281g00313 Petunia axillaris
Peaxi162Scf00281g00315 Petunia axillaris
Peaxi162Scf00420g00935 Petunia axillaris
Peaxi162Scf00420g00936 Petunia axillaris
Peaxi162Scf00420g00943 Petunia axillaris
Peaxi162Scf00420g00945 Petunia axillaris
PGR042G1457 Punica granatum
Phvul.001G097600 Phaseolus vulgaris
Potri.014G141100 Populus trichocarpa
Pp3c10_7760 Physcomitrium patens
Pp3c14_8290 Physcomitrium patens
Pp3c14_8293 Physcomitrium patens
Prupe.3G316100 Prunus persica
Psat0s3545g0040 Pisum sativum
Psat0s4626g0040 Pisum sativum
Psat0s4626g0080 Pisum sativum
PSO017G2606 Papaver somniferum
PSO478G2418 Papaver somniferum
QL02p063896 Quercus lobata
QL02p063912 Quercus lobata
RcHm_v2.0_Chr2g0176781 Rosa chinensis
RcHm_v2.0_Chr7g0218031 Rosa chinensis
Rhsim08G0036900 Rhododendron simsii
Sabra14G0106400 Salix brachista
SalBow4G1044 Salvia bowleyana
Sc16g0004210 Simmondsia chinensis
Sed0004915 Sechium edule
SEGI_07003 Sequoiadendron giganteum
SEGI_07298 Sequoiadendron giganteum
SEGI_28776 Sequoiadendron giganteum
SEGI_33424 Sequoiadendron giganteum
SGA_v2.0_scaffold44G16961 Striga asiatica
SMO353G0092 Selaginella moellendorffii
Solyc02g094600.2 Solanum lycopersicum
Solyc02g094610.1 Solanum lycopersicum
Sopen02g039270 Solanum pennellii
Sp1g11500 Schrenkiella parvula
TAR629G2385 Trochodendron aralioides
THA.LOC104805290 Tarenaya hassleriana
Thecc.04G053100 Theobroma cacao
Thhalv10006676m.g Eutrema salsugineum
Thhalv10017610m.g Eutrema salsugineum
TPR.G31052 Trifolium pratense
TWI32G0903 Tripterygium wilfordii
vmacro22106 Vaccinium macrocarpon
VMungo1383G1594 Vigna mungo
Zm00001eb197740 Zea mays

User provided reference genes

Program Settings