Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p41140 Brassica napus
A03p03690 Brassica napus
A10p28440 Brassica napus
Aa31LG11G2650 Aethionema arabicum
Aa31LG3G18330 Aethionema arabicum
Actinidia09967 Actinidia chinensis
Actinidia13713 Actinidia chinensis
Actinidia38416 Actinidia chinensis
AL6G18640 Arabidopsis lyrata
AL6G34350 Arabidopsis lyrata
Aqoxy5G03711 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0GGX7L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.48DCIV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4W5XID Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X1AWTF Arachis hypogaea
AT5G08240 Arabidopsis thaliana
AT5G23160 Arabidopsis thaliana
ATR0618G439 Amborella trichopoda
ATR0820G166 Amborella trichopoda
AUR62017700 Chenopodium quinoa
AUR62032989 Chenopodium quinoa
BcaB01g05621 Brassica carinata
BcaB07g29865 Brassica carinata
BcaB08g37272 Brassica carinata
BcaC03g18036 Brassica carinata
BcaNung05094 Brassica carinata
BolC2t12149H Brassica oleracea
BolC3t12950H Brassica oleracea
BolC9t59616H Brassica oleracea
BraA02t09057Z Brassica rapa
BraA03t09717Z Brassica rapa
BraA10t44892Z Brassica rapa
C02p61000 Brassica napus
C03p04180 Brassica napus
C09p68700 Brassica napus
CANSAT11G0906 Cannabis sativa
CANSAT56G2818 Cannabis sativa
CARHR190370 Cardamine hirsuta
CARHR204930 Cardamine hirsuta
Carub.0006s0712 Capsella rubella
Carub.0006s2095 Capsella rubella
Cc11_g02400 Coffea canephora
Cfa008752 Carpinus fangiana
Ciclev10031878m.g Citrus clementina
CiPaw.05G169900 Carya illinoinensis
CiPaw.06G061400 Carya illinoinensis
ClCG09G004510 Citrullus lanatus
COL.COLO4_02949 Corchorus olitorius
COL.COLO4_03341 Corchorus olitorius
Cpa.g.sc0.139 Carica papaya
Cpa.g.sc12.19 Carica papaya
CsaV3_7G030630 Cucumis sativus L.
CSS0011334 Camellia sinensis var. sinensis
DCAR_002584 Daucus carota
DCAR_023460 Daucus carota
DCAR_025546 Daucus carota
DCAR_026896 Daucus carota
Dinv08359 Davidia involucrata
Duzib132G0593 Durio zibethinus
Duzib213G0120 Durio zibethinus
Duzib213G0682 Durio zibethinus
Duzib248G0841 Durio zibethinus
Duzib268G1412 Durio zibethinus
ECA246G5167 Erigeron canadensis
Eucgr.G02576 Eucalyptus grandis
FAN07G1145 Fragaria x ananassa
FAN12G0758 Fragaria x ananassa
FAN17G1725 Fragaria x ananassa
FvH4_4g36960 Fragaria vesca
Glyma.09G282600 Glycine max
Glyma.20G002800 Glycine max
Gohir.A01G069700 Gossypium hirsutum
Gohir.A03G164900 Gossypium hirsutum
Gohir.A12G133500 Gossypium hirsutum
Gohir.D01G056900 Gossypium hirsutum
Gohir.D02G188100 Gossypium hirsutum
Gohir.D12G137000 Gossypium hirsutum
Gorai.002G077300 Gossypium raimondii
Gorai.005G210800 Gossypium raimondii
Gorai.008G148300 Gossypium raimondii
HanXRQChr16g0513081 Helianthus annuus
Haze_11768 Corylus avellana
HPP92_022556 Vanilla planifolia
HPP92_026032 Vanilla planifolia
Lalb_Chr10g0094961 Lupinus albus
Lj2g0006429 Lotus japonicus
Lj6A712T59 Lonicera japonica
Lj6A717T151 Lonicera japonica
Lsat_1_v5_gn_3_35360 Lactuca sativa
Lsat_1_v5_gn_7_105881 Lactuca sativa
Manes.03G007400 Manihot esculenta
Manes.11G107400 Manihot esculenta
Manes.15G081600 Manihot esculenta
MBI03_g09362_MAGBIO Magnolia biondii
MBI06_g16016_MAGBIO Magnolia biondii
MD13G1005200 Malus domestica
MD16G1002700 Malus domestica
Medtr1g037520 Medicago truncatula
MELO3C023593.2 Cucumis melo
Migut.E00694 Erythranthe guttata
Migut.H01894 Erythranthe guttata
Migut.M01847 Erythranthe guttata
MSTRG.13683 Avicennia marina
Nitab4.5_0000771g0160 Nicotiana tabacum
Nitab4.5_0002132g0010 Nicotiana tabacum
Nitab4.5_0005356g0050 Nicotiana tabacum
Nn1g03826 Nelumbo nucifera
Nn3g18663 Nelumbo nucifera
Oeu013185.1 Olea europaea
Oeu063832.1 Olea europaea
PGR083G0466 Punica granatum
PGR142G2540 Punica granatum
PGSC0003DMG400032563 Solanum tuberosum
Phvul.003G005000 Phaseolus vulgaris
Potri.001G408900 Populus trichocarpa
Potri.005G092400 Populus trichocarpa
Potri.007G071900 Populus trichocarpa
Prupe.1G347600 Prunus persica
Psat6g135800 Pisum sativum
PSO063G0432 Papaver somniferum
PSO782G4784 Papaver somniferum
QL03p044176 Quercus lobata
QL08p017181 Quercus lobata
RcHm_v2.0_Chr4g0446731 Rosa chinensis
Sabra05G0076500 Salix brachista
Sabra07G0060600 Salix brachista
Sabra16G0271700 Salix brachista
Sabra16G0276700 Salix brachista
SalBow2G0414 Salvia bowleyana
SalBow7G2669 Salvia bowleyana
Sc06g0007710 Simmondsia chinensis
Sed0004092 Sechium edule
SEGI_05076 Sequoiadendron giganteum
SEGI_06945 Sequoiadendron giganteum
SEGI_22038 Sequoiadendron giganteum
SEGI_27209 Sequoiadendron giganteum
SEGI_29997 Sequoiadendron giganteum
SEGI_32645 Sequoiadendron giganteum
SEGI_32875 Sequoiadendron giganteum
SGA_v2.0_scaffold6G03215 Striga asiatica
SGA_v2.0_scaffold73G24324 Striga asiatica
Solyc02g014773.1 Solanum lycopersicum
Solyc04g009305.1 Solanum lycopersicum
Sopen04g004420 Solanum pennellii
Sp6g34710 Schrenkiella parvula
TAR371G0604 Trochodendron aralioides
TAR629G0072 Trochodendron aralioides
Thecc.02G159800 Theobroma cacao
Thecc.07G068900 Theobroma cacao
Thhalv10005318m.g Eutrema salsugineum
Thhalv10005437m.g Eutrema salsugineum
Thhalv10014452m.g Eutrema salsugineum
TPR.G39976 Trifolium pratense
TWI38G1693 Tripterygium wilfordii
TWI39G0991 Tripterygium wilfordii
TWI74G1071 Tripterygium wilfordii
TWI77G0994 Tripterygium wilfordii
VMungo0251G3481 Vigna mungo
Zm00001eb045360 Zea mays

User provided reference genes

Program Settings