Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p28470 Brassica napus
Aa31LG8G7240 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2939 Anthoceros agrestis
Actinidia14703 Actinidia chinensis
Actinidia18194 Actinidia chinensis
Actinidia18195 Actinidia chinensis
Ah.11g044630 Amaranthus hybridus
AL3G34150 Arabidopsis lyrata
Aqoxy7G00927 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.A3GFYF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C5JVH4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E1I8FT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FCA0JR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LJH7P1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XC2JTE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y2NPND Arachis hypogaea
AT3G20430 Arabidopsis thaliana
ATR0789G072 Amborella trichopoda
Atru.chr7.2020 Acer truncatum
AUR62009186 Chenopodium quinoa
AUR62022041 Chenopodium quinoa
BcaB06g26108 Brassica carinata
BcaC05g28330 Brassica carinata
BolC5t33107H Brassica oleracea
BraA05t21726Z Brassica rapa
C05p43910 Brassica napus
CAN.G1226.13 Capsicum annuum
CANSAT25G0619 Cannabis sativa
CARHR096140 Cardamine hirsuta
Carub.0003s2037 Capsella rubella
Ca_02416_v3 Cicer arietinum L.
Ca_15870_v3 Cicer arietinum L.
CBR_g36456 Chara braunii
Cc08_g10350 Coffea canephora
CDE02G1740 Ceratophyllum demersum
CDE05G2638 Ceratophyllum demersum
Cfa017933 Carpinus fangiana
Ciclev10009210m.g Citrus clementina
CiPaw.15G041800 Carya illinoinensis
ClCG06G000280 Citrullus lanatus
COL.COLO4_21028 Corchorus olitorius
Cpa.g.sc84.21 Carica papaya
CsaV3_6G006070 Cucumis sativus L.
CSS0030937 Camellia sinensis var. sinensis
CSS0042880 Camellia sinensis var. sinensis
DCAR_019057 Daucus carota
Dinv23423 Davidia involucrata
Dinv27966 Davidia involucrata
Duzib168G1792 Durio zibethinus
Duzib187G0056 Durio zibethinus
ECA233G0431 Erigeron canadensis
EL10Ac2g03929 Beta vulgaris
Eucgr.C00634 Eucalyptus grandis
FAN15G2153 Fragaria x ananassa
FAN20G3218 Fragaria x ananassa
FAN24G0041 Fragaria x ananassa
FAN24G1203 Fragaria x ananassa
FAN27G3258 Fragaria x ananassa
FvH4_2g32180 Fragaria vesca
Glyma.04G049800 Glycine max
Glyma.06G050800 Glycine max
Glyma.14G092900 Glycine max
Gohir.A05G043900 Gossypium hirsutum
Gohir.A07G022140 Gossypium hirsutum
Gohir.D05G045500 Gossypium hirsutum
Gohir.D07G022900 Gossypium hirsutum
Gorai.001G023600 Gossypium raimondii
Gorai.009G046700 Gossypium raimondii
GSVIVG01035344001 Vitis vinifera
HanXRQChr08g0226451 Helianthus annuus
HanXRQChr08g0226601 Helianthus annuus
HanXRQChr09g0251171 Helianthus annuus
Haze_18215 Corylus avellana
Hma1.2p1_1266F.1_g271430 Hydrangea macrophylla
Hma1.2p1_1944F.1_g308530 Hydrangea macrophylla
HPP92_014384 Vanilla planifolia
Hund03357 Selenicereus undatus
Hund19474 Selenicereus undatus
Lalb_Chr22g0355991 Lupinus albus
Lalb_Chr24g0399591 Lupinus albus
Lj1g0026801 Lotus japonicus
Lj5g0003794 Lotus japonicus
Lsat_1_v5_gn_6_7421 Lactuca sativa
Manes.03G046600 Manihot esculenta
Manes.16G077900 Manihot esculenta
Mapoly0091s0021 Marchantia polymorpha
MBI01_g16584_MAGBIO Magnolia biondii
MCO09G383 Micromonas commoda
Medtr1g016630 Medicago truncatula
Medtr3g104160 Medicago truncatula
Medtr3g104200 Medicago truncatula
MELO3C022510.2 Cucumis melo
Migut.A00154 Erythranthe guttata
MSTRG.11672 Avicennia marina
MSTRG.25939 Avicennia marina
Nitab4.5_0000359g0090 Nicotiana tabacum
Nitab4.5_0006174g0020 Nicotiana tabacum
Nitab4.5_0008290g0030 Nicotiana tabacum
Nn6g35393 Nelumbo nucifera
Nn8g38954 Nelumbo nucifera
Oeu018654.1 Olea europaea
Oeu037326.2 Olea europaea
Os01g0559200 Oryza sativa ssp. japonica
Peaxi162Scf00436g00719 Petunia axillaris
PGR031G0410 Punica granatum
PGR142G1482 Punica granatum
PGSC0003DMG400005151 Solanum tuberosum
PGSC0003DMG400032806 Solanum tuberosum
PGSC0003DMG400032808 Solanum tuberosum
Phvul.001G033700 Phaseolus vulgaris
Phvul.009G076200 Phaseolus vulgaris
Potri.006G232800 Populus trichocarpa
Pp3c10_2240 Physcomitrium patens
Prupe.1G414900 Prunus persica
Psat5g036520 Pisum sativum
Psat6g019640 Pisum sativum
PSO017G0877 Papaver somniferum
PSO017G1019 Papaver somniferum
PSO017G5975 Papaver somniferum
PSO063G4337 Papaver somniferum
PSO210G6474 Papaver somniferum
PSO210G6518 Papaver somniferum
QL02p103256 Quercus lobata
QL03p011519 Quercus lobata
QL03p011522 Quercus lobata
QL07p000612 Quercus lobata
RcHm_v2.0_Chr6g0310491 Rosa chinensis
RcHm_v2.0_Chr6g0310501 Rosa chinensis
Rhsim01G0127300 Rhododendron simsii
Rhsim07G0143600 Rhododendron simsii
Rhsim11G0046800 Rhododendron simsii
RhsimUnG0015000 Rhododendron simsii
Sabra06G0181300 Salix brachista
SalBow4G3199 Salvia bowleyana
Sc09g0009680 Simmondsia chinensis
Sed0005208 Sechium edule
Sed0027918 Sechium edule
SEGI_10906 Sequoiadendron giganteum
SGA_v2.0_scaffold88G27218 Striga asiatica
Solyc04g080350.4 Solanum lycopersicum
Sopen04g033940 Solanum pennellii
Sp3g18440 Schrenkiella parvula
TAR383G0831 Trochodendron aralioides
TAR626G1184 Trochodendron aralioides
THA.LOC104811250 Tarenaya hassleriana
Thecc.09G051200 Theobroma cacao
Thhalv10021403m.g Eutrema salsugineum
TPR.G13109 Trifolium pratense
TPR.G25353 Trifolium pratense
TPR.G25355 Trifolium pratense
TWI34G1837 Tripterygium wilfordii
TWI63G0708 Tripterygium wilfordii
unitig_736.g22340 Utricularia gibba
vmacro00163 Vaccinium macrocarpon
vmacro00165 Vaccinium macrocarpon
vmacro05280 Vaccinium macrocarpon
VMungo0647G1140 Vigna mungo
VMungo1309G2710 Vigna mungo
Zm00001eb356770 Zea mays

User provided reference genes

Program Settings