Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p17380 Brassica napus
A05p36110 Brassica napus
A08p00560 Brassica napus
Aa31LG10G710 Aethionema arabicum
Aa31LG8G630 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4359 Anthoceros agrestis
Actinidia16228 Actinidia chinensis
Actinidia30440 Actinidia chinensis
Ah.04g153920 Amaranthus hybridus
AL1G63560 Arabidopsis lyrata
AL3G25290 Arabidopsis lyrata
Aqoxy1G00087 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.C35Y2E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GHD6QC Arachis hypogaea
AT1G55535 Arabidopsis thaliana
AT3G13420 Arabidopsis thaliana
ATR0068G064 Amborella trichopoda
Atru.chr4.902 Acer truncatum
AUR62042621 Chenopodium quinoa
BcaB01g01142 Brassica carinata
BcaB01g02219 Brassica carinata
BcaB02g10815 Brassica carinata
BcaC01g01533 Brassica carinata
BcaC05g29180 Brassica carinata
BcaC08g44204 Brassica carinata
BolC3t21591H Brassica oleracea
BolC5t34115H Brassica oleracea
BolC6t36812H Brassica oleracea
BraA05t20635Z Brassica rapa
BraA08t32115Z Brassica rapa
C03p92850 Brassica napus
C05p54480 Brassica napus
C06p16140 Brassica napus
CARHR045220 Cardamine hirsuta
CARHR088030 Cardamine hirsuta
CARHR152870 Cardamine hirsuta
Carub.0001s4404 Capsella rubella
Carub.0003s1279 Capsella rubella
Ca_18793_v3 Cicer arietinum L.
CBR_g37640 Chara braunii
Cc01_g00270 Coffea canephora
CDE02G3000 Ceratophyllum demersum
CDE04G0921 Ceratophyllum demersum
Cfa009532 Carpinus fangiana
Ciclev10016282m.g Citrus clementina
CiPaw.13G179200 Carya illinoinensis
ClCG02G024480 Citrullus lanatus
COL.COLO4_35070 Corchorus olitorius
Cpa.g.sc119.21 Carica papaya
CsaV3_4G017680 Cucumis sativus L.
CSS0040072 Camellia sinensis var. sinensis
DCAR_023824 Daucus carota
Dinv03791 Davidia involucrata
Dinv13490 Davidia involucrata
Duzib150G1073 Durio zibethinus
ECA238G2653 Erigeron canadensis
ECA248G0105 Erigeron canadensis
EL10Ac7g17533 Beta vulgaris
Eucgr.B03584 Eucalyptus grandis
Eucgr.J01746 Eucalyptus grandis
FAN11G3564 Fragaria x ananassa
FAN16G2113 Fragaria x ananassa
FAN21G0323 Fragaria x ananassa
FAN25G0403 Fragaria x ananassa
FvH4_3g45940 Fragaria vesca
Glyma.07G225000 Glycine max
Glyma.20G024900 Glycine max
Gohir.A03G021700 Gossypium hirsutum
Gohir.A08G014200 Gossypium hirsutum
Gohir.D03G147000 Gossypium hirsutum
Gohir.D08G020800 Gossypium hirsutum
Gorai.003G154400 Gossypium raimondii
Gorai.004G020100 Gossypium raimondii
GSVIVG01025506001 Vitis vinifera
HanXRQChr14g0437111 Helianthus annuus
Haze_22921 Corylus avellana
HPP92_000788 Vanilla planifolia
HPP92_019023 Vanilla planifolia
HPP92_019024 Vanilla planifolia
HPP92_026813 Vanilla planifolia
Lalb_Chr05g0219881 Lupinus albus
Lalb_Chr16g0385441 Lupinus albus
Lj1C553T1 Lonicera japonica
Lj1C553T2 Lonicera japonica
Lj4g0023466 Lotus japonicus
Lsat_1_v5_gn_1_71301 Lactuca sativa
Lsat_1_v5_gn_2_50660 Lactuca sativa
Manes.16G034900 Manihot esculenta
Manes.17G052200 Manihot esculenta
Mapoly0036s0042 Marchantia polymorpha
MBI19_g09317_MAGBIO Magnolia biondii
MCO11G868 Micromonas commoda
MD03G1001500 Malus domestica
MD11G1001200 Malus domestica
Medtr4g083300 Medicago truncatula
Medtr7g111220 Medicago truncatula
MELO3C031044.2 Cucumis melo
Migut.N00531 Erythranthe guttata
MSTRG.18889 Avicennia marina
Nitab4.5_0000075g0210 Nicotiana tabacum
Nitab4.5_0002355g0020 Nicotiana tabacum
Nn2g15897 Nelumbo nucifera
Nn7g35809 Nelumbo nucifera
Oeu023964.1 Olea europaea
Oeu060910.1 Olea europaea
Os07g0223700 Oryza sativa ssp. japonica
Peaxi162Scf00186g01212 Petunia axillaris
PGR102G2973 Punica granatum
PGR119G0742 Punica granatum
Phvul.002G101400 Phaseolus vulgaris
Potri.001G001400 Populus trichocarpa
Potri.003G223300 Populus trichocarpa
Pp3c14_21170 Physcomitrium patens
Pp3c1_38420 Physcomitrium patens
Pp3c2_4610 Physcomitrium patens
Prupe.6G001400 Prunus persica
Psat5g028080 Pisum sativum
Psat5g028160 Pisum sativum
Psat7g133480 Pisum sativum
PSO339G2035 Papaver somniferum
PSO384G0395 Papaver somniferum
PSO541G5087 Papaver somniferum
PSO675G3694 Papaver somniferum
QL01p007909 Quercus lobata
QL01p007925 Quercus lobata
RcHm_v2.0_Chr5g0084051 Rosa chinensis
Rhsim01G0183700 Rhododendron simsii
Sabra01G0001000 Salix brachista
SalBow3G0087 Salvia bowleyana
Sc13g0003960 Simmondsia chinensis
Sed0012812 Sechium edule
SEGI_24089 Sequoiadendron giganteum
SGA_v2.0_scaffold3G01700 Striga asiatica
SGA_v2.0_scaffold6G03329 Striga asiatica
SHI06880 Sapria himalayana
SHI31305 Sapria himalayana
SMO203G0107 Selaginella moellendorffii
SMO271G0148 Selaginella moellendorffii
SMO308G0081 Selaginella moellendorffii
SMO353G0048 Selaginella moellendorffii
Solyc01g050070.4 Solanum lycopersicum
Sopen01g019490 Solanum pennellii
Sp1g41150 Schrenkiella parvula
Sp3g11610 Schrenkiella parvula
TAR369G0719 Trochodendron aralioides
TAR623G1190 Trochodendron aralioides
THA.LOC104815673 Tarenaya hassleriana
Thecc.09G205600 Theobroma cacao
Thhalv10011735m.g Eutrema salsugineum
Thhalv10021458m.g Eutrema salsugineum
TPR.G34071 Trifolium pratense
TWI34G0101 Tripterygium wilfordii
TWI60G0130 Tripterygium wilfordii
unitig_52.g17526 Utricularia gibba
unitig_62.g23532 Utricularia gibba
vmacro12597 Vaccinium macrocarpon
VMungo0251G3504 Vigna mungo
Zm00001eb095200 Zea mays
Zm00001eb303530 Zea mays

User provided reference genes

Program Settings