Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p29720 Brassica napus
Aa31LG7G4240 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2963 Anthoceros agrestis
Actinidia15353 Actinidia chinensis
Actinidia19205 Actinidia chinensis
Actinidia35627 Actinidia chinensis
AL1G32350 Arabidopsis lyrata
Aqoxy6G01166 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0NG64P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E2W35F Arachis hypogaea
AT1G19630 Arabidopsis thaliana
Atru.chr3.654 Acer truncatum
Atru.chr3.700 Acer truncatum
Atru.chr3.800 Acer truncatum
AUR62014495 Chenopodium quinoa
AUR62038043 Chenopodium quinoa
AUR62038051 Chenopodium quinoa
BcaB03g12906 Brassica carinata
BolC8t49578H Brassica oleracea
BolC8t49600H Brassica oleracea
BolC8t49603H Brassica oleracea
BraA08t34908Z Brassica rapa
C08p19550 Brassica napus
C08p19670 Brassica napus
CAN.G1226.49 Capsicum annuum
CAN.G299.12 Capsicum annuum
CAN.G358.43 Capsicum annuum
CAN.G458.27 Capsicum annuum
CANSAT25G1310 Cannabis sativa
CARHR020150 Cardamine hirsuta
Carub.0001s1917 Capsella rubella
Ca_15495_v3 Cicer arietinum L.
Ca_22336_v3 Cicer arietinum L.
Cc07_g09920 Coffea canephora
Cfa006897 Carpinus fangiana
Cfa013860 Carpinus fangiana
Ciclev10027097m.g Citrus clementina
Ciclev10027167m.g Citrus clementina
CiPaw.07G049400 Carya illinoinensis
CiPaw.07G049500 Carya illinoinensis
CiPaw.08G059700 Carya illinoinensis
ClCG01G019850 Citrullus lanatus
ClCG08G014820 Citrullus lanatus
COL.COLO4_22027 Corchorus olitorius
COL.COLO4_22028 Corchorus olitorius
COL.COLO4_26260 Corchorus olitorius
Cpa.g.sc6.167 Carica papaya
Cpa.g.sc99.36 Carica papaya
CsaV3_2G028920 Cucumis sativus L.
CsaV3_6G046570 Cucumis sativus L.
CSS0002199 Camellia sinensis var. sinensis
CSS0038051 Camellia sinensis var. sinensis
Dinv39445 Davidia involucrata
Dinv40020 Davidia involucrata
Duzib093G0062 Durio zibethinus
Duzib147G1610 Durio zibethinus
EL10Ac1g00642 Beta vulgaris
Eucgr.F01592 Eucalyptus grandis
Eucgr.I02403 Eucalyptus grandis
FAN05G0399 Fragaria x ananassa
FAN19G0662 Fragaria x ananassa
FAN20G0085 Fragaria x ananassa
FAN20G0455 Fragaria x ananassa
FAN23G2876 Fragaria x ananassa
FAN26G1162 Fragaria x ananassa
FAN27G0631 Fragaria x ananassa
FAN28G1204 Fragaria x ananassa
FvH4_1g12750 Fragaria vesca
FvH4_2g39460 Fragaria vesca
FvH4_6g26890 Fragaria vesca
Glyma.04G030100 Glycine max
Glyma.16G133800 Glycine max
Gohir.A06G008300 Gossypium hirsutum
Gohir.A12G062800 Gossypium hirsutum
Gohir.D06G004000 Gossypium hirsutum
Gohir.D12G062700 Gossypium hirsutum
Gorai.008G065700 Gossypium raimondii
Gorai.010G008600 Gossypium raimondii
GSVIVG01009750001 Vitis vinifera
GSVIVG01018891001 Vitis vinifera
HanXRQChr15g0482311 Helianthus annuus
HanXRQChr15g0482321 Helianthus annuus
HanXRQChr15g0482331 Helianthus annuus
Haze_03855 Corylus avellana
Haze_22535 Corylus avellana
Hma1.2p1_0469F.1_g158990 Hydrangea macrophylla
Hund26908 Selenicereus undatus
Hund27134 Selenicereus undatus
Lalb_Chr08g0245931 Lupinus albus
Lj1g0010132 Lotus japonicus
Lj4C206T12 Lonicera japonica
Lj4C36T5 Lonicera japonica
Lj4g0006703 Lotus japonicus
Lj4g0022048 Lotus japonicus
Lsat_1_v5_gn_3_56180 Lactuca sativa
Lsat_1_v5_gn_3_77380 Lactuca sativa
Manes.01G138800 Manihot esculenta
Manes.18G021506 Manihot esculenta
Manes.18G094900 Manihot esculenta
MBI16_g08779_MAGBIO Magnolia biondii
MBI16_g30354_MAGBIO Magnolia biondii
MD08G1027400 Malus domestica
MD15G1255700 Malus domestica
MD15G1256200 Malus domestica
Medtr3g112120 Medicago truncatula
Medtr8g076940 Medicago truncatula
MELO3C007856.2 Cucumis melo
MELO3C010961.2 Cucumis melo
Migut.D01565 Erythranthe guttata
Nitab4.5_0000723g0230 Nicotiana tabacum
Nitab4.5_0005626g0030 Nicotiana tabacum
Nitab4.5_0009228g0060 Nicotiana tabacum
Nn1g04911 Nelumbo nucifera
Os05g0101600 Oryza sativa ssp. japonica
Peaxi162Scf00418g00732 Petunia axillaris
PGR083G0079 Punica granatum
PGR119G2285 Punica granatum
PGSC0003DMG400003608 Solanum tuberosum
PGSC0003DMG400003742 Solanum tuberosum
Phvul.003G256500 Phaseolus vulgaris
Phvul.009G060000 Phaseolus vulgaris
Potri.002G033000 Populus trichocarpa
Pp3c6_10270 Physcomitrium patens
Prupe.1G375900 Prunus persica
Prupe.7G158700 Prunus persica
Psat4g095720 Pisum sativum
Psat5g016280 Pisum sativum
PSO541G4972 Papaver somniferum
PSO675G3059 Papaver somniferum
QL02p009249 Quercus lobata
QL06p035384 Quercus lobata
RcHm_v2.0_Chr2g0100851 Rosa chinensis
RcHm_v2.0_Chr2g0128621 Rosa chinensis
RcHm_v2.0_Chr6g0301491 Rosa chinensis
RcHm_v2.0_Chr7g0201921 Rosa chinensis
Rhsim06G0030000 Rhododendron simsii
Sabra02G0026700 Salix brachista
Sed0011639 Sechium edule
Sed0025921 Sechium edule
SEGI_08170 Sequoiadendron giganteum
Solyc02g084930.3 Solanum lycopersicum
Solyc04g080650.4 Solanum lycopersicum
Sopen02g029600 Solanum pennellii
Sopen04g034240 Solanum pennellii
Sp1g17470 Schrenkiella parvula
TAR628G0173 Trochodendron aralioides
THA.LOC104813233 Tarenaya hassleriana
Thecc.01G029900 Theobroma cacao
Thecc.08G031400 Theobroma cacao
Thecc.08G031600 Theobroma cacao
Thhalv10007476m.g Eutrema salsugineum
TPR.G12304 Trifolium pratense
TPR.G21532 Trifolium pratense
TWI09G1613 Tripterygium wilfordii
TWI36G0102 Tripterygium wilfordii
vmacro21669 Vaccinium macrocarpon
VMungo0251G1753 Vigna mungo
VMungo1309G1437 Vigna mungo
Zm00001eb356300 Zea mays

User provided reference genes

Program Settings