Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p35940 Brassica napus
A03p40660 Brassica napus
A05p31210 Brassica napus
Aa31LG10G4840 Aethionema arabicum
Aa31LG8G5240 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.17 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.463 Anthoceros agrestis
Actinidia35087 Actinidia chinensis
AL1G56000 Arabidopsis lyrata
AL3G31700 Arabidopsis lyrata
Aqoxy3G00301 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.HI5GUI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K20T5Q Arachis hypogaea
AT1G49140 Arabidopsis thaliana
AT3G18410 Arabidopsis thaliana
ATR1125G038 Amborella trichopoda
Atru.chr9.839 Acer truncatum
AUR62025859 Chenopodium quinoa
AUR62029861 Chenopodium quinoa
BcaB02g11300 Brassica carinata
BcaB04g18985 Brassica carinata
BcaB04g20765 Brassica carinata
BcaB06g25886 Brassica carinata
BcaC01g03699 Brassica carinata
BcaC05g28630 Brassica carinata
BcaC09g48802 Brassica carinata
BolC1t04540H Brassica oleracea
BolC3t17241H Brassica oleracea
BolC5t33461H Brassica oleracea
BraA01t03675Z Brassica rapa
BraA03t13222Z Brassica rapa
BraA05t21962Z Brassica rapa
C01p45770 Brassica napus
C03p49450 Brassica napus
C05p47340 Brassica napus
CAN.G121.2 Capsicum annuum
CAN.G133.16 Capsicum annuum
CAN.G519.12 Capsicum annuum
CAN.G790.56 Capsicum annuum
CANSAT80G1137 Cannabis sativa
CANSAT80G2616 Cannabis sativa
CARHR039120 Cardamine hirsuta
CARHR093770 Cardamine hirsuta
Carub.0001s3830 Capsella rubella
Carub.0003s1819 Capsella rubella
Ca_25495_v3 Cicer arietinum L.
Cc04_g07140 Coffea canephora
CDE12G0498 Ceratophyllum demersum
Cfa019782 Carpinus fangiana
Ciclev10022984m.g Citrus clementina
CiPaw.15G130400 Carya illinoinensis
CiPaw.16G085900 Carya illinoinensis
ClCG00G005470 Citrullus lanatus
ClCG04G011140 Citrullus lanatus
COL.COLO4_05967 Corchorus olitorius
Cpa.g.sc3.515 Carica papaya
CsaV3_1G006620 Cucumis sativus L.
CSS0004107 Camellia sinensis var. sinensis
CSS0044395 Camellia sinensis var. sinensis
DCAR_011353 Daucus carota
DCAR_015141 Daucus carota
Dinv09796 Davidia involucrata
Dinv28099 Davidia involucrata
Duzib068G0917 Durio zibethinus
Duzib084G0409 Durio zibethinus
Duzib205G0602 Durio zibethinus
Duzib205G1322 Durio zibethinus
ECA233G5146 Erigeron canadensis
EL10Ac5g11436 Beta vulgaris
Eucgr.K02221 Eucalyptus grandis
FAN04G1546 Fragaria x ananassa
FAN08G0397 Fragaria x ananassa
FAN13G2727 Fragaria x ananassa
FAN18G1297 Fragaria x ananassa
FAN18G2044 Fragaria x ananassa
FvH4_5g12140 Fragaria vesca
Glyma.07G091500 Glycine max
Glyma.09G184500 Glycine max
Gohir.A08G094600 Gossypium hirsutum
Gohir.A09G047600 Gossypium hirsutum
Gohir.D08G105800 Gossypium hirsutum
Gohir.D09G048700 Gossypium hirsutum
Gorai.004G113100 Gossypium raimondii
Gorai.006G061400 Gossypium raimondii
GSVIVG01008282001 Vitis vinifera
HanXRQChr08g0226081 Helianthus annuus
HanXRQChr16g0517341 Helianthus annuus
Haze_18669 Corylus avellana
Hma1.2p1_0653F.1_g196320 Hydrangea macrophylla
HPP92_020802 Vanilla planifolia
Hund02392 Selenicereus undatus
Lalb_Chr22g0353061 Lupinus albus
Lalb_Chr24g0397761 Lupinus albus
Lj2g0019547 Lotus japonicus
Lsat_1_v5_gn_8_144301 Lactuca sativa
Manes.01G011800 Manihot esculenta
Manes.05G137500 Manihot esculenta
Mapoly0004s0055 Marchantia polymorpha
MCO12G018 Micromonas commoda
MD06G1215900 Malus domestica
MD14G1197200 Malus domestica
MD14G1226500 Malus domestica
MD15G1306200 Malus domestica
Medtr6g084520 Medicago truncatula
MELO3C002086.2 Cucumis melo
Migut.I00347 Erythranthe guttata
MSTRG.22945 Avicennia marina
Nitab4.5_0000208g0260 Nicotiana tabacum
Nitab4.5_0001194g0030 Nicotiana tabacum
Nitab4.5_0006638g0020 Nicotiana tabacum
Nitab4.5_0007985g0060 Nicotiana tabacum
Nn3g17841 Nelumbo nucifera
Oeu046994.1 Olea europaea
Os10g0576000 Oryza sativa ssp. japonica
Peaxi162Scf00634g00116 Petunia axillaris
PGR142G1335 Punica granatum
PGSC0003DMG400023110 Solanum tuberosum
Phvul.004G157200 Phaseolus vulgaris
Potri.012G056900 Populus trichocarpa
Potri.015G054700 Populus trichocarpa
Pp3c9_26150 Physcomitrium patens
PRCOL_00001312 Prasinoderma coloniale
Prupe.1G218000 Prunus persica
Prupe.2G045100 Prunus persica
Prupe.5G221100 Prunus persica
Psat1g037680 Pisum sativum
PSO782G2824 Papaver somniferum
QL10p025263 Quercus lobata
RcHm_v2.0_Chr7g0185431 Rosa chinensis
Rhsim12G0143400 Rhododendron simsii
Sabra12G0040400 Salix brachista
SalBow5G1005 Salvia bowleyana
Sc12g0007720 Simmondsia chinensis
Sed0004773 Sechium edule
Sed0021676 Sechium edule
SEGI_01620 Sequoiadendron giganteum
SGA_v2.0_scaffold19G08815 Striga asiatica
SGA_v2.0_scaffold25G10991 Striga asiatica
SMO169G0039 Selaginella moellendorffii
Solyc12g036790.2 Solanum lycopersicum
Sopen12g018390 Solanum pennellii
Sp1g36030 Schrenkiella parvula
Sp3g16520 Schrenkiella parvula
TAR371G0608 Trochodendron aralioides
TAR374G1478 Trochodendron aralioides
THA.LOC104820396 Tarenaya hassleriana
THA.LOC104821841 Tarenaya hassleriana
Thecc.03G034700 Theobroma cacao
Thhalv10011884m.g Eutrema salsugineum
Thhalv10022379m.g Eutrema salsugineum
TPR.G27937 Trifolium pratense
TWI60G0557 Tripterygium wilfordii
TWI81G1036 Tripterygium wilfordii
unitig_26.g9674 Utricularia gibba
unitig_749.g13425 Utricularia gibba
vmacro12793 Vaccinium macrocarpon
VMungo0464G1721 Vigna mungo
Zm00001eb024750 Zea mays
Zm00001eb224900 Zea mays

User provided reference genes

Program Settings