Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p02910 Brassica napus
A10p29550 Brassica napus
Aa31LG11G7680 Aethionema arabicum
Actinidia09383 Actinidia chinensis
Ah.13g076090 Amaranthus hybridus
AL6G16940 Arabidopsis lyrata
Aqoxy1G00120 Aquilegia oxysepala
Aqoxy1G00160 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2GY28N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7J08Q6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CB7VX4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F2TBWJ Arachis hypogaea
AT5G06820 Arabidopsis thaliana
Atru.chr8.1053 Acer truncatum
Atru.chr8.1054 Acer truncatum
AUR62012063 Chenopodium quinoa
AUR62024324 Chenopodium quinoa
BcaB01g06020 Brassica carinata
BcaC06g32398 Brassica carinata
BcaC06g32539 Brassica carinata
BolC3t12877H Brassica oleracea
BolC9t59735H Brassica oleracea
BraA03t09654Z Brassica rapa
BraA10t44998Z Brassica rapa
C03p03350 Brassica napus
C09p69920 Brassica napus
CAN.G654.5 Capsicum annuum
CANSAT64G1251 Cannabis sativa
CARHR206350 Cardamine hirsuta
Carub.0006s0571 Capsella rubella
Ca_08507_v3 Cicer arietinum L.
Ca_26116_v3 Cicer arietinum L.
Cc00_g14620 Coffea canephora
Cc02_g32900 Coffea canephora
Cfa016901 Carpinus fangiana
Ciclev10013344m.g Citrus clementina
CiPaw.10G027800 Carya illinoinensis
ClCG10G017390 Citrullus lanatus
COL.COLO4_36137 Corchorus olitorius
Cpa.g.sc85.86 Carica papaya
CsaV3_3G038980 Cucumis sativus L.
CsaV3_3G038990 Cucumis sativus L.
DCAR_019838 Daucus carota
DCAR_025588 Daucus carota
DCAR_025610 Daucus carota
DCAR_026247 Daucus carota
Dinv24091 Davidia involucrata
Duzib128G1033 Durio zibethinus
ECA236G4278 Erigeron canadensis
EL10Ac3g06942 Beta vulgaris
Eucgr.A02440 Eucalyptus grandis
FAN02G0851 Fragaria x ananassa
FAN02G0948 Fragaria x ananassa
FAN05G1282 Fragaria x ananassa
FAN09G4228 Fragaria x ananassa
FAN14G2151 Fragaria x ananassa
FAN14G3986 Fragaria x ananassa
FvH4_6g22260 Fragaria vesca
FvH4_6g22370 Fragaria vesca
FvH4_6g22660 Fragaria vesca
Glyma.02G177000 Glycine max
Glyma.03G143000 Glycine max
Glyma.10G091400 Glycine max
Gohir.A09G126900 Gossypium hirsutum
Gohir.D09G123280 Gossypium hirsutum
Gorai.006G141800 Gossypium raimondii
GSVIVG01033522001 Vitis vinifera
HanXRQChr05g0132831 Helianthus annuus
HanXRQChr06g0176301 Helianthus annuus
Haze_19964 Corylus avellana
Hma1.2p1_0005F.1_g004280 Hydrangea macrophylla
Lalb_Chr18g0047751 Lupinus albus
Lalb_Chr21g0317081 Lupinus albus
Lj1g0027895 Lotus japonicus
Lj2C371T5 Lonicera japonica
Lj5g0016632 Lotus japonicus
Lju124C29T10 Lonicera japonica
Lsat_1_v5_gn_8_75600 Lactuca sativa
Manes.09G032500 Manihot esculenta
MBI01_g24372_MAGBIO Magnolia biondii
MBI04_g32799_MAGBIO Magnolia biondii
MBI04_g46722_MAGBIO Magnolia biondii
MBI14_g23353_MAGBIO Magnolia biondii
MBI18_g06874_MAGBIO Magnolia biondii
MBI18_g06875_MAGBIO Magnolia biondii
MBI18_g18577_MAGBIO Magnolia biondii
MBI19_g02940_MAGBIO Magnolia biondii
MD12G1060500 Malus domestica
MD14G1060500 Malus domestica
Medtr1g053525 Medicago truncatula
Medtr7g092910 Medicago truncatula
MELO3C009641.2 Cucumis melo
MELO3C009642.2 Cucumis melo
Migut.J01820 Erythranthe guttata
MSTRG.6467 Avicennia marina
Nitab4.5_0000016g0310 Nicotiana tabacum
Nitab4.5_0003572g0030 Nicotiana tabacum
Nn7g36042 Nelumbo nucifera
Oeu033186.1 Olea europaea
Peaxi162Scf00258g00013 Petunia axillaris
Peaxi162Scf00620g00917 Petunia axillaris
PGR004G1151 Punica granatum
PGSC0003DMG400002059 Solanum tuberosum
Phvul.001G140900 Phaseolus vulgaris
Phvul.007G258000 Phaseolus vulgaris
Potri.006G190700 Populus trichocarpa
Prupe.6G256200 Prunus persica
Prupe.7G074000 Prunus persica
Psat0s5999g0080 Pisum sativum
Psat2g141440 Pisum sativum
Psat3g069640 Pisum sativum
Psat5g151160 Pisum sativum
Psat5g151200 Pisum sativum
Psat5g234960 Pisum sativum
Psat6g092440 Pisum sativum
Psat6g193000 Pisum sativum
PSO339G1505 Papaver somniferum
PSO339G2447 Papaver somniferum
PSO339G6386 Papaver somniferum
PSO384G1001 Papaver somniferum
PSO384G1975 Papaver somniferum
PSO384G3427 Papaver somniferum
PSO384G3482 Papaver somniferum
QL07p023168 Quercus lobata
QL11p021645 Quercus lobata
RcHm_v2.0_Chr3g0476831 Rosa chinensis
RcHm_v2.0_Chr3g0476851 Rosa chinensis
RcHm_v2.0_Chr3g0476861 Rosa chinensis
RcHm_v2.0_Chr3g0480221 Rosa chinensis
Rhsim03G0009000 Rhododendron simsii
Rhsim08G0007900 Rhododendron simsii
Sabra06G0146200 Salix brachista
SalBow6G0661 Salvia bowleyana
SalBow8G2618 Salvia bowleyana
Sc13g0002150 Simmondsia chinensis
Sed0012691 Sechium edule
Sed0020739 Sechium edule
SEGI_32032 Sequoiadendron giganteum
SEGI_36749 Sequoiadendron giganteum
SGA_v2.0_scaffold105G30477 Striga asiatica
SHI02227 Sapria himalayana
Solyc03g059020.3 Solanum lycopersicum
Sopen03g013070 Solanum pennellii
Sp6g36040 Schrenkiella parvula
TAR623G0681 Trochodendron aralioides
TAR623G1489 Trochodendron aralioides
TAR636G1287 Trochodendron aralioides
THA.LOC104809924 Tarenaya hassleriana
THA.LOC104826765 Tarenaya hassleriana
Thecc.05G168700 Theobroma cacao
Thhalv10012782m.g Eutrema salsugineum
TPR.G13237 Trifolium pratense
TPR.G13244 Trifolium pratense
TPR.G24915 Trifolium pratense
TWI77G0256 Tripterygium wilfordii
vmacro07934 Vaccinium macrocarpon
VMungo0720G0914 Vigna mungo
VMungo0720G2297 Vigna mungo
VMungo1383G1212 Vigna mungo

User provided reference genes

Program Settings