Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p36720 Brassica napus
A10p03150 Brassica napus
Aa31LG1G20160 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5703 Anthoceros agrestis
Actinidia34629 Actinidia chinensis
Ah.13g078120 Amaranthus hybridus
AL1G14450 Arabidopsis lyrata
Aqoxy2G03762 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1U5TDY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.30ZQL1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6GV0UE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CTZ7GB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HVCV5S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NCJ5VK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NE6RSN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U2G3U9 Arachis hypogaea
AT1G04730 Arabidopsis thaliana
ATR1126G077 Amborella trichopoda
ATR1134G025 Amborella trichopoda
Atru.chr4.1755 Acer truncatum
AUR62020811 Chenopodium quinoa
BcaB05g25185 Brassica carinata
BcaC07g36884 Brassica carinata
BolC5t29073H Brassica oleracea
BolC8t46953H Brassica oleracea
BraA10t42588Z Brassica rapa
C05p02920 Brassica napus
C08p01440 Brassica napus
CAN.G500.60 Capsicum annuum
CANSAT78G0267 Cannabis sativa
CARHR004120 Cardamine hirsuta
Carub.0001s0398 Capsella rubella
Ca_13906_v3 Cicer arietinum L.
CBR_g49379 Chara braunii
CBR_g49381 Chara braunii
CBR_g51440 Chara braunii
Cc03_g07450 Coffea canephora
CDE05G3475 Ceratophyllum demersum
Cfa014885 Carpinus fangiana
Cfa027206 Carpinus fangiana
Ciclev10006428m.g Citrus clementina
Ciclev10006732m.g Citrus clementina
CiPaw.01G124800 Carya illinoinensis
ClCG05G003490 Citrullus lanatus
COL.COLO4_20296 Corchorus olitorius
Cpa.g.sc59.109 Carica papaya
Cpa.g.sc59.110 Carica papaya
Cpa.g.sc59.114 Carica papaya
Cpa.g.sc59.115 Carica papaya
Cre16.g686950 Chlamydomonas reinhardtii
CsaV3_3G011150 Cucumis sativus L.
DCAR_024331 Daucus carota
Dinv38259 Davidia involucrata
Duzib212G0527 Durio zibethinus
ECA248G0292 Erigeron canadensis
EL10Ac3g07492 Beta vulgaris
Eucgr.H02841 Eucalyptus grandis
FAN12G0850 Fragaria x ananassa
FAN17G0872 Fragaria x ananassa
FAN17G2976 Fragaria x ananassa
FAN22G1357 Fragaria x ananassa
FvH4_4g00330 Fragaria vesca
Glyma.10G123400 Glycine max
Glyma.20G075951 Glycine max
Gohir.A09G052300 Gossypium hirsutum
Gohir.D09G052960 Gossypium hirsutum
Gorai.006G056100 Gossypium raimondii
GSVIVG01001871001 Vitis vinifera
GSVIVG01001872001 Vitis vinifera
GSVIVG01003526001 Vitis vinifera
GSVIVG01003527001 Vitis vinifera
GSVIVG01003592001 Vitis vinifera
GSVIVG01003879001 Vitis vinifera
GSVIVG01003880001 Vitis vinifera
GSVIVG01003881001 Vitis vinifera
GSVIVG01012955001 Vitis vinifera
GSVIVG01012956001 Vitis vinifera
GSVIVG01012968001 Vitis vinifera
GSVIVG01012969001 Vitis vinifera
GSVIVG01013291001 Vitis vinifera
GSVIVG01013292001 Vitis vinifera
GSVIVG01029095001 Vitis vinifera
GSVIVG01034307001 Vitis vinifera
GSVIVG01034308001 Vitis vinifera
GSVIVG01034323001 Vitis vinifera
GSVIVG01037607001 Vitis vinifera
HanXRQChr10g0310121 Helianthus annuus
Haze_11582 Corylus avellana
Hma1.2p1_3134F.1_g332990 Hydrangea macrophylla
HPP92_001443 Vanilla planifolia
HPP92_001444 Vanilla planifolia
HPP92_001456 Vanilla planifolia
HPP92_001457 Vanilla planifolia
HPP92_001458 Vanilla planifolia
HPP92_002621 Vanilla planifolia
HPP92_002638 Vanilla planifolia
Lalb_Chr03g0036601 Lupinus albus
Lj3A557T55 Lonicera japonica
Lj3A569T42 Lonicera japonica
Lj3A569T43 Lonicera japonica
Lj3C557T17 Lonicera japonica
Lj3C557T20 Lonicera japonica
Lj6g0012936 Lotus japonicus
Lsat_1_v5_gn_1_72241 Lactuca sativa
Manes.15G051466 Manihot esculenta
Mapoly0122s0062 Marchantia polymorpha
MBI07_g23668_MAGBIO Magnolia biondii
MCO09G046 Micromonas commoda
MD09G1000200 Malus domestica
Medtr1g047790 Medicago truncatula
MELO3C006327.2 Cucumis melo
Migut.N00349 Erythranthe guttata
MSTRG.24629 Avicennia marina
Nitab4.5_0000306g0090 Nicotiana tabacum
Nitab4.5_0002412g0020 Nicotiana tabacum
Nn1g07791 Nelumbo nucifera
Oeu063486.3 Olea europaea
Os03g0264800 Oryza sativa ssp. japonica
Peaxi162Scf00047g01035 Petunia axillaris
Phvul.007G235800 Phaseolus vulgaris
Potri.001G050300 Populus trichocarpa
Pp3c7_23730 Physcomitrium patens
PRCOL_00005798 Prasinoderma coloniale
Prupe.3G316000 Prunus persica
Psat4g108120 Pisum sativum
Psat6g048480 Pisum sativum
PSO017G2612 Papaver somniferum
PSO063G1896 Papaver somniferum
QL06p023698 Quercus lobata
RcHm_v2.0_Chr4g0385211 Rosa chinensis
Rhsim09G0051800 Rhododendron simsii
Rhsim09G0051900 Rhododendron simsii
Sabra01G0035200 Salix brachista
SalBow3G3268 Salvia bowleyana
Sc19g0007110 Simmondsia chinensis
Sed0003506 Sechium edule
SEGI_15253 Sequoiadendron giganteum
SEGI_18128 Sequoiadendron giganteum
SGA_v2.0_scaffold323G48644 Striga asiatica
SHI01089 Sapria himalayana
SHI01090 Sapria himalayana
SHI01091 Sapria himalayana
SHI01092 Sapria himalayana
Solyc09g091650.3 Solanum lycopersicum
Sopen09g034560 Solanum pennellii
Sp1g03570 Schrenkiella parvula
TAR365G1130 Trochodendron aralioides
THA.LOC104826111 Tarenaya hassleriana
Thecc.04G208200 Theobroma cacao
Thhalv10006720m.g Eutrema salsugineum
TPR.G19802 Trifolium pratense
TPR.G34820 Trifolium pratense
TPR.G40389 Trifolium pratense
TWI09G1249 Tripterygium wilfordii
unitig_21.g20007 Utricularia gibba
vmacro00499 Vaccinium macrocarpon
VMungo0540G2327 Vigna mungo
VMungo0720G2098 Vigna mungo
VMungo1215G3390 Vigna mungo
Zm00001eb011700 Zea mays

User provided reference genes

Program Settings