Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p01170 Brassica napus
A10p32580 Brassica napus
Aa31LG1G21720 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2690 Anthoceros agrestis
Actinidia28911 Actinidia chinensis
Ah.08g211550 Amaranthus hybridus
AL6G12780 Arabidopsis lyrata
Aqoxy3G01670 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.DYK8MJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZWC5L9 Arachis hypogaea
AT5G03430 Arabidopsis thaliana
ATR0910G004 Amborella trichopoda
Atru.chr8.1786 Acer truncatum
AUR62026916 Chenopodium quinoa
AUR62042064 Chenopodium quinoa
BcaB01g05821 Brassica carinata
BcaB01g05839 Brassica carinata
BcaB05g21840 Brassica carinata
BcaC03g13007 Brassica carinata
BcaC06g32058 Brassica carinata
BcaC06g32061 Brassica carinata
BolC2t06097H Brassica oleracea
BolC3t12705H Brassica oleracea
BolC9t60074H Brassica oleracea
BraA02t04760Z Brassica rapa
BraA03t09499Z Brassica rapa
BraA10t45293Z Brassica rapa
C02p01070 Brassica napus
C03p01510 Brassica napus
C09p73380 Brassica napus
CAN.G488.15 Capsicum annuum
CAN.G900.20 Capsicum annuum
CAN.G900.21 Capsicum annuum
CANSAT80G1177 Cannabis sativa
CARHR209910 Cardamine hirsuta
Carub.0006s0224 Capsella rubella
Ca_08910_v3 Cicer arietinum L.
CBR_g4033 Chara braunii
Cc06_g04350 Coffea canephora
CDE10G0806 Ceratophyllum demersum
Cfa017631 Carpinus fangiana
Cfa022272 Carpinus fangiana
Ciclev10011527m.g Citrus clementina
CiPaw.10G128900 Carya illinoinensis
ClCG10G020050 Citrullus lanatus
COL.COLO4_09330 Corchorus olitorius
COL.COLO4_26944 Corchorus olitorius
Cre13.g592500 Chlamydomonas reinhardtii
CsaV3_3G036050 Cucumis sativus L.
CSS0044786 Camellia sinensis var. sinensis
DCAR_015004 Daucus carota
DCAR_017670 Daucus carota
Dinv35795 Davidia involucrata
Dinv37323 Davidia involucrata
Duzib093G2129 Durio zibethinus
ECA238G0572 Erigeron canadensis
ECA248G3038 Erigeron canadensis
EL10Ac7g16646 Beta vulgaris
Eucgr.K02925 Eucalyptus grandis
FAN02G2572 Fragaria x ananassa
FAN05G1679 Fragaria x ananassa
FAN05G2520 Fragaria x ananassa
FAN09G4748 Fragaria x ananassa
FAN14G0478 Fragaria x ananassa
FvH4_6g16530 Fragaria vesca
Glyma.03G184200 Glycine max
Glyma.19G184800 Glycine max
Gohir.A04G071600 Gossypium hirsutum
Gohir.A04G071700 Gossypium hirsutum
Gohir.D04G110200 Gossypium hirsutum
Gorai.009G414300 Gossypium raimondii
GSVIVG01033653001 Vitis vinifera
HanXRQChr07g0194721 Helianthus annuus
HanXRQChr13g0396631 Helianthus annuus
HanXRQChr14g0454821 Helianthus annuus
Haze_20522 Corylus avellana
Hma1.2p1_0828F.1_g225130 Hydrangea macrophylla
HPP92_025807 Vanilla planifolia
Hund20335 Selenicereus undatus
Lalb_Chr20g0112571 Lupinus albus
Lalb_Chr25g0288951 Lupinus albus
Lj1g0000599 Lotus japonicus
Lj2C120T4 Lonicera japonica
Lsat_1_v5_gn_1_51600 Lactuca sativa
Lsat_1_v5_gn_6_17200 Lactuca sativa
Manes.12G084800 Manihot esculenta
Mapoly0054s0056 Marchantia polymorpha
MBI17_g34762_MAGBIO Magnolia biondii
MD04G1091700 Malus domestica
MD12G1109700 Malus domestica
Medtr7g102180 Medicago truncatula
MELO3C009365.2 Cucumis melo
Migut.J00646 Erythranthe guttata
Migut.L01711 Erythranthe guttata
MSTRG.10328 Avicennia marina
Nitab4.5_0000063g0160 Nicotiana tabacum
Nitab4.5_0000578g0080 Nicotiana tabacum
Nitab4.5_0000814g0100 Nicotiana tabacum
Nitab4.5_0010955g0010 Nicotiana tabacum
Nn2g13812 Nelumbo nucifera
Nn6g35264 Nelumbo nucifera
Oeu005028.1 Olea europaea
Oeu041487.1 Olea europaea
Os01g0259600 Oryza sativa ssp. japonica
Peaxi162Scf00311g01314 Petunia axillaris
Peaxi162Scf00722g00015 Petunia axillaris
PGR004G2373 Punica granatum
PGSC0003DMG400003892 Solanum tuberosum
PGSC0003DMG401028184 Solanum tuberosum
Phvul.001G179700 Phaseolus vulgaris
Potri.006G123000 Populus trichocarpa
PRCOL_00001257 Prasinoderma coloniale
PRCOL_00006213 Prasinoderma coloniale
Prupe.7G128300 Prunus persica
Psat3g041880 Pisum sativum
PSO339G5499 Papaver somniferum
PSO801G0054 Papaver somniferum
QL07p043056 Quercus lobata
RcHm_v2.0_Chr3g0470441 Rosa chinensis
Rhsim03G0090600 Rhododendron simsii
Sabra06G0097300 Salix brachista
SalBow2G1223 Salvia bowleyana
SalBow3G0082 Salvia bowleyana
SalBow3G1023 Salvia bowleyana
SalBow3G2408 Salvia bowleyana
SalBow3G3127 Salvia bowleyana
Sc20g0005590 Simmondsia chinensis
Sed0020729 Sechium edule
SEGI_14784 Sequoiadendron giganteum
SEGI_37303 Sequoiadendron giganteum
SGA_v2.0_scaffold224G42938 Striga asiatica
SGA_v2.0_scaffold75G24834 Striga asiatica
SHI12325 Sapria himalayana
SMO146G0130 Selaginella moellendorffii
Solyc09g008310.3 Solanum lycopersicum
Solyc10g083960.2 Solanum lycopersicum
Sopen09g003130 Solanum pennellii
Sopen10g033410 Solanum pennellii
Sp6g39310 Schrenkiella parvula
TAR633G1938 Trochodendron aralioides
TAR636G0069 Trochodendron aralioides
TAR636G0130 Trochodendron aralioides
TAR636G0918 Trochodendron aralioides
TAR636G1582 Trochodendron aralioides
THA.LOC104823232 Tarenaya hassleriana
THA.LOC104826918 Tarenaya hassleriana
Thecc.05G068900 Theobroma cacao
Thhalv10013303m.g Eutrema salsugineum
TPR.G11110 Trifolium pratense
TPR.G32815 Trifolium pratense
TWI74G0242 Tripterygium wilfordii
TWI77G0706 Tripterygium wilfordii
unitig_60.g25815 Utricularia gibba
vmacro01673 Vaccinium macrocarpon
vmacro07301 Vaccinium macrocarpon
VMungo1383G0058 Vigna mungo
VMungo1383G2351 Vigna mungo
Zm00001eb127890 Zea mays
Zm00001eb128460 Zea mays
Zm00001eb333440 Zea mays

User provided reference genes

Program Settings