Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p00960 Brassica napus
A10p26390 Brassica napus
Aa31LG3G15850 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2409 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.5405 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.467 Anthoceros agrestis
Actinidia13266 Actinidia chinensis
Actinidia20317 Actinidia chinensis
AL6G21990 Arabidopsis lyrata
Aqoxy7G01991 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.P67EX8 Arachis hypogaea
AT5G11340 Arabidopsis thaliana
ATR0618G325 Amborella trichopoda
Atru.chr7.2357 Acer truncatum
AUR62032353 Chenopodium quinoa
AUR62041848 Chenopodium quinoa
BcaB08g37069 Brassica carinata
BcaC03g13363 Brassica carinata
BcaC04g19238 Brassica carinata
BcaNung01922 Brassica carinata
BolC2t06455H Brassica oleracea
BolC9t59376H Brassica oleracea
BraA02t05080Z Brassica rapa
BraA10t44696Z Brassica rapa
C02p04990 Brassica napus
C02p05140 Brassica napus
C02p05180 Brassica napus
C09p65530 Brassica napus
CAN.G165.5 Capsicum annuum
CAN.G199.38 Capsicum annuum
CAN.G211.13 Capsicum annuum
CANSAT54G1009 Cannabis sativa
CANSAT54G1633 Cannabis sativa
CANSAT54G2276 Cannabis sativa
CARHR201910 Cardamine hirsuta
CARHR201920 Cardamine hirsuta
Carub.0006s0980 Capsella rubella
Ca_06490_v3 Cicer arietinum L.
CBR_g51562 Chara braunii
Cc11_g01650 Coffea canephora
CDE01G0001 Ceratophyllum demersum
CDE02G1057 Ceratophyllum demersum
Cfa013194 Carpinus fangiana
Ciclev10009736m.g Citrus clementina
CiPaw.07G219500 Carya illinoinensis
ClCG08G013040 Citrullus lanatus
COL.COLO4_24002 Corchorus olitorius
Cpa.g.sc91.31 Carica papaya
Cre02.g101850 Chlamydomonas reinhardtii
CsaV3_2G031770 Cucumis sativus L.
CSS0033658 Camellia sinensis var. sinensis
DCAR_022890 Daucus carota
Duzib150G1379 Durio zibethinus
Duzib187G0288 Durio zibethinus
ECA233G2050 Erigeron canadensis
EL10Ac2g02565 Beta vulgaris
Eucgr.C01806 Eucalyptus grandis
FAN15G0393 Fragaria x ananassa
FAN24G0064 Fragaria x ananassa
FAN27G0432 Fragaria x ananassa
FvH4_2g29780 Fragaria vesca
Glyma.02G309600 Glycine max
Glyma.14G003300 Glycine max
Glyma.14G123400 Glycine max
Gohir.A02G109708 Gossypium hirsutum
Gohir.A04G025100 Gossypium hirsutum
Gohir.A04G025200 Gossypium hirsutum
Gohir.A04G025400 Gossypium hirsutum
Gohir.A04G025500 Gossypium hirsutum
Gohir.A08G090062 Gossypium hirsutum
Gohir.D03G064300 Gossypium hirsutum
Gohir.D08G102900 Gossypium hirsutum
Gorai.004G110900 Gossypium raimondii
Gorai.013G110600 Gossypium raimondii
GSVIVG01035773001 Vitis vinifera
HanXRQChr02g0050671 Helianthus annuus
HanXRQChr02g0050691 Helianthus annuus
HanXRQChr02g0050741 Helianthus annuus
HanXRQChr13g0402451 Helianthus annuus
Haze_21593 Corylus avellana
Haze_21595 Corylus avellana
Haze_21596 Corylus avellana
Haze_26917 Corylus avellana
HPP92_024601 Vanilla planifolia
Hund03009 Selenicereus undatus
Hund25700 Selenicereus undatus
Lalb_Chr04g0247051 Lupinus albus
Lalb_Chr04g0247061 Lupinus albus
Lalb_Chr17g0349351 Lupinus albus
Lj1g0014596 Lotus japonicus
Lj7A716G42 Lonicera japonica
Lj8A616G45 Lonicera japonica
Lsat_1_v5_gn_6_21660 Lactuca sativa
Manes.03G018300 Manihot esculenta
Manes.16G118300 Manihot esculenta
Mapoly0023s0029 Marchantia polymorpha
MCO16G331 Micromonas commoda
MD08G1142000 Malus domestica
MD15G1118400 Malus domestica
Medtr5g098790 Medicago truncatula
MELO3C011228.2 Cucumis melo
Migut.E01484 Erythranthe guttata
MSTRG.13991 Avicennia marina
MSTRG.25860 Avicennia marina
Nitab4.5_0000508g0250 Nicotiana tabacum
Nitab4.5_0001780g0060 Nicotiana tabacum
Nitab4.5_0002000g0050 Nicotiana tabacum
Nitab4.5_0002339g0050 Nicotiana tabacum
Nitab4.5_0007227g0020 Nicotiana tabacum
Nn2g11907 Nelumbo nucifera
Nn8g39345 Nelumbo nucifera
Oeu032496.1 Olea europaea
Os01g0610400 Oryza sativa ssp. japonica
Peaxi162Scf00251g01121 Petunia axillaris
Peaxi162Scf01343g00154 Petunia axillaris
PGR031G0419 Punica granatum
PGSC0003DMG400007371 Solanum tuberosum
PGSC0003DMG400008977 Solanum tuberosum
PGSC0003DMG400026128 Solanum tuberosum
Phvul.008G289800 Phaseolus vulgaris
Potri.006G248900 Populus trichocarpa
Potri.018G032400 Populus trichocarpa
Pp3c13_8050 Physcomitrium patens
PRCOL_00002723 Prasinoderma coloniale
Prupe.1G471800 Prunus persica
Psat2g001840 Pisum sativum
PSO017G1065 Papaver somniferum
PSO170G5542 Papaver somniferum
QL12p031735 Quercus lobata
RcHm_v2.0_Chr6g0298801 Rosa chinensis
Rhsim07G0150800 Rhododendron simsii
Sabra06G0194700 Salix brachista
SalBow8G2141 Salvia bowleyana
SalBow8G2197 Salvia bowleyana
Sc09g0008690 Simmondsia chinensis
Sed0003647 Sechium edule
Sed0007380 Sechium edule
SEGI_22963 Sequoiadendron giganteum
SGA_v2.0_scaffold169G38624 Striga asiatica
SHI54407 Sapria himalayana
SHI54562 Sapria himalayana
SMO114G0115 Selaginella moellendorffii
SMO356G0009 Selaginella moellendorffii
Solyc06g065570.3 Solanum lycopersicum
Solyc08g067440.2 Solanum lycopersicum
Sopen06g024110 Solanum pennellii
Sopen08g021370 Solanum pennellii
Sp6g32240 Schrenkiella parvula
TAR625G0264 Trochodendron aralioides
TAR636G1605 Trochodendron aralioides
THA.LOC104799227 Tarenaya hassleriana
THA.LOC104815033 Tarenaya hassleriana
Thecc.09G147500 Theobroma cacao
Thhalv10014874m.g Eutrema salsugineum
TPR.G35885 Trifolium pratense
TWI34G0493 Tripterygium wilfordii
TWI63G1039 Tripterygium wilfordii
vmacro05203 Vaccinium macrocarpon
vmacro05207 Vaccinium macrocarpon
VMungo0647G1556 Vigna mungo
Zm00001eb161820 Zea mays

User provided reference genes

Program Settings