Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p10680 Brassica napus
Aa31LG6G8880 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1520 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2118 Anthoceros agrestis
Actinidia30796 Actinidia chinensis
Ah.05g169670 Amaranthus hybridus
AL1G49940 Arabidopsis lyrata
Aqoxy6G00082 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1274C3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H5V4Y1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SJ0MJA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WH8Y2A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z84UIM Arachis hypogaea
AT1G35220 Arabidopsis thaliana
ATR0684G075 Amborella trichopoda
Atru.chr13.1116 Acer truncatum
AUR62018974 Chenopodium quinoa
AUR62027815 Chenopodium quinoa
BcaB03g13886 Brassica carinata
BcaC06g35430 Brassica carinata
BolC7t42122H Brassica oleracea
BraA07t28862Z Brassica rapa
C07p16280 Brassica napus
CAN.G1173.1 Capsicum annuum
CANSAT64G2709 Cannabis sativa
CARHR286320 Cardamine hirsuta
Carub.0001s3287 Capsella rubella
Ca_06108_v3 Cicer arietinum L.
Ca_16276_v3 Cicer arietinum L.
CBR_g5699 Chara braunii
Cc10_g06660 Coffea canephora
CDE10G1069 Ceratophyllum demersum
Cfa017894 Carpinus fangiana
Ciclev10000130m.g Citrus clementina
CiPaw.15G045700 Carya illinoinensis
ClCG11G014330 Citrullus lanatus
COL.COLO4_12005 Corchorus olitorius
Cre10.g457150 Chlamydomonas reinhardtii
CsaV3_3G047720 Cucumis sativus L.
CSS0035277 Camellia sinensis var. sinensis
DCAR_009580 Daucus carota
Dinv05858 Davidia involucrata
Dinv05859 Davidia involucrata
Dinv07074 Davidia involucrata
Duzib041G0801 Durio zibethinus
ECA232G4443 Erigeron canadensis
ECA247G3686 Erigeron canadensis
EL10Ac1g01144 Beta vulgaris
Eucgr.B00041 Eucalyptus grandis
FAN04G2218 Fragaria x ananassa
FAN08G3634 Fragaria x ananassa
FAN13G1430 Fragaria x ananassa
FAN18G1967 Fragaria x ananassa
FvH4_5g36450 Fragaria vesca
Glyma.02G270100 Glycine max
Glyma.13G027300 Glycine max
Glyma.20G056500 Glycine max
Glyma.20G056600 Glycine max
Gohir.A03G045800 Gossypium hirsutum
Gohir.A06G033300 Gossypium hirsutum
Gohir.D03G121400 Gossypium hirsutum
Gohir.D06G034200 Gossypium hirsutum
Gorai.003G128400 Gossypium raimondii
Gorai.010G037700 Gossypium raimondii
GSVIVG01009085001 Vitis vinifera
HanXRQChr09g0248911 Helianthus annuus
HanXRQChr12g0379801 Helianthus annuus
Haze_18258 Corylus avellana
Haze_18259 Corylus avellana
Haze_18261 Corylus avellana
Hma1.2p1_0593F.1_g185750 Hydrangea macrophylla
HPP92_016948 Vanilla planifolia
HPP92_016951 Vanilla planifolia
Hund16887 Selenicereus undatus
Hund26990 Selenicereus undatus
Hund26991 Selenicereus undatus
Lalb_Chr17g0347341 Lupinus albus
Lalb_Chr18g0048141 Lupinus albus
Lj4C96G17 Lonicera japonica
Lj6g0009212 Lotus japonicus
LjContig00564g0017936 Lotus japonicus
Lsat_1_v5_gn_1_3061 Lactuca sativa
Lsat_1_v5_gn_9_73921 Lactuca sativa
Manes.02G148900 Manihot esculenta
Manes.18G025208 Manihot esculenta
Manes.18G063378 Manihot esculenta
Mapoly0104s0038 Marchantia polymorpha
MBI06_g22313_MAGBIO Magnolia biondii
MD08G1188800 Malus domestica
MD15G1376600 Malus domestica
MD15G1376700 Malus domestica
Medtr3g080120 Medicago truncatula
Medtr5g085880 Medicago truncatula
MELO3C003550.2 Cucumis melo
Migut.C00225 Erythranthe guttata
MSTRG.24986 Avicennia marina
Nitab4.5_0000786g0020 Nicotiana tabacum
Nitab4.5_0005108g0010 Nicotiana tabacum
Nn7g37838 Nelumbo nucifera
Oeu029742.2 Olea europaea
Os01g0303200 Oryza sativa ssp. japonica
Os05g0355133 Oryza sativa ssp. japonica
Peaxi162Scf00030g02517 Petunia axillaris
Peaxi162Scf00571g00528 Petunia axillaris
PGSC0003DMG400017755 Solanum tuberosum
Phvul.008G211900 Phaseolus vulgaris
Phvul.L003337 Phaseolus vulgaris
Potri.002G100800 Populus trichocarpa
Pp3c1_27170 Physcomitrium patens
Pp3c2_15510 Physcomitrium patens
PRCOL_00002948 Prasinoderma coloniale
Prupe.1G523400 Prunus persica
Psat0s1135g0080 Pisum sativum
Psat0s2339g0080 Pisum sativum
Psat0s5307g0040 Pisum sativum
Psat1g107360 Pisum sativum
Psat2g022120 Pisum sativum
Psat3g007840 Pisum sativum
Psat3g007920 Pisum sativum
Psat3g111360 Pisum sativum
Psat4g114320 Pisum sativum
Psat5g110840 Pisum sativum
PSO447G0261 Papaver somniferum
PSO700G0312 Papaver somniferum
QL02p002343 Quercus lobata
QL02p059881 Quercus lobata
RcHm_v2.0_Chr7g0238491 Rosa chinensis
Rhsim06G0077700 Rhododendron simsii
Sabra02G0079000 Salix brachista
SalBow7G3028 Salvia bowleyana
Sc01g0000810 Simmondsia chinensis
Sed0011558 Sechium edule
Sed0018981 Sechium edule
SEGI_18178 Sequoiadendron giganteum
SEGI_27036 Sequoiadendron giganteum
SEGI_36321 Sequoiadendron giganteum
SGA_v2.0_scaffold74G24568 Striga asiatica
SHI20572 Sapria himalayana
SHI20575 Sapria himalayana
SHI20581 Sapria himalayana
SHI20583 Sapria himalayana
SMO134G0184 Selaginella moellendorffii
SMO356G0157 Selaginella moellendorffii
Solyc04g074720.3 Solanum lycopersicum
Solyc12g057130.3 Solanum lycopersicum
Sopen04g029690 Solanum pennellii
Sopen12g029790 Solanum pennellii
Sp1g25380 Schrenkiella parvula
TAR381G1087 Trochodendron aralioides
THA.LOC104816596 Tarenaya hassleriana
Thecc.08G101700 Theobroma cacao
Thhalv10006673m.g Eutrema salsugineum
TPR.G14449 Trifolium pratense
TPR.G34506 Trifolium pratense
TWI56G0493 Tripterygium wilfordii
unitig_46.g17923 Utricularia gibba
vmacro21290 Vaccinium macrocarpon
VMungo0540G1065 Vigna mungo
VMungo0647G2280 Vigna mungo
Zm00001eb130190 Zea mays
Zm00001eb286080 Zea mays
Zm00001eb288650 Zea mays

User provided reference genes

Program Settings