Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p23540 Brassica napus
A07p26680 Brassica napus
A07p45230 Brassica napus
Aa31LG4G720 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3101 Anthoceros agrestis
Actinidia03225 Actinidia chinensis
Actinidia18218 Actinidia chinensis
Ah.01g020430 Amaranthus hybridus
AL2G41040 Arabidopsis lyrata
Aqoxy133s001 Aquilegia oxysepala
Aqoxy7G02449 Aquilegia oxysepala
Aqoxy7G03604 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.GS37TA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TT8CUF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZMG720 Arachis hypogaea
AT1G80460 Arabidopsis thaliana
ATR0767G098 Amborella trichopoda
Atru.chr1.2868 Acer truncatum
AUR62011496 Chenopodium quinoa
AUR62016312 Chenopodium quinoa
BcaB02g07269 Brassica carinata
BcaB02g08684 Brassica carinata
BcaB05g25268 Brassica carinata
BcaC03g15965 Brassica carinata
BcaC03g15966 Brassica carinata
BcaC07g39914 Brassica carinata
BcaC08g45315 Brassica carinata
BolC2t09741H Brassica oleracea
BolC6t38080H Brassica oleracea
BolC6t40420H Brassica oleracea
BraA02t07347Z Brassica rapa
BraA07t30311Z Brassica rapa
BraA07t32026Z Brassica rapa
C02p37310 Brassica napus
C06p29160 Brassica napus
C06p54070 Brassica napus
CAN.G407.13 Capsicum annuum
CANSAT56G2846 Cannabis sativa
CARHR074790 Cardamine hirsuta
Carub.0002s2712 Capsella rubella
Ca_12518_v3 Cicer arietinum L.
CBR_g30419 Chara braunii
CBR_g36912 Chara braunii
Cc04_g04590 Coffea canephora
CDE02G1563 Ceratophyllum demersum
CDE04G3165 Ceratophyllum demersum
Cfa001939 Carpinus fangiana
Cfa003309 Carpinus fangiana
Ciclev10020202m.g Citrus clementina
Ciclev10024258m.g Citrus clementina
Ciclev10025360m.g Citrus clementina
Ciclev10025756m.g Citrus clementina
Ciclev10027554m.g Citrus clementina
CiPaw.01G250100 Carya illinoinensis
ClCG09G003080 Citrullus lanatus
COL.COLO4_11866 Corchorus olitorius
Cpa.g.sc10.151 Carica papaya
Cre04.g224150 Chlamydomonas reinhardtii
CsaV3_7G032210 Cucumis sativus L.
CSS0015374 Camellia sinensis var. sinensis
CSS0045117 Camellia sinensis var. sinensis
DCAR_016275 Daucus carota
DCAR_025524 Daucus carota
Dinv30630 Davidia involucrata
Dinv38137 Davidia involucrata
Duzib160G0518 Durio zibethinus
Duzib192G0877 Durio zibethinus
Duzib235G0619 Durio zibethinus
ECA246G2681 Erigeron canadensis
ECA247G4132 Erigeron canadensis
EL10Ac9g21895 Beta vulgaris
Eucgr.F03908 Eucalyptus grandis
Eucgr.J03080 Eucalyptus grandis
FAN02G2065 Fragaria x ananassa
FAN02G2439 Fragaria x ananassa
FAN02G3805 Fragaria x ananassa
FAN05G2875 Fragaria x ananassa
FAN09G0009 Fragaria x ananassa
FAN09G0310 Fragaria x ananassa
FAN14G4723 Fragaria x ananassa
FvH4_6g29330 Fragaria vesca
FvH4_6g29340 Fragaria vesca
Glyma.07G028600 Glycine max
Gohir.A06G115200 Gossypium hirsutum
Gohir.D06G120000 Gossypium hirsutum
Gorai.010G138000 Gossypium raimondii
GSVIVG01017422001 Vitis vinifera
HanXRQChr02g0034821 Helianthus annuus
Haze_12952 Corylus avellana
Haze_16585 Corylus avellana
Haze_20327 Corylus avellana
Haze_26767 Corylus avellana
Hma1.2p1_0461F.1_g157780 Hydrangea macrophylla
HPP92_026428 Vanilla planifolia
Hund06548 Selenicereus undatus
Lalb_Chr01g0012271 Lupinus albus
Lalb_Chr04g0262301 Lupinus albus
Lalb_Chr25g0279091 Lupinus albus
Lj3g0014011 Lotus japonicus
Lj5A75T45 Lonicera japonica
Lsat_1_v5_gn_1_31380 Lactuca sativa
Lsat_1_v5_gn_5_8920 Lactuca sativa
Manes.11G060045 Manihot esculenta
Manes.11G060600 Manihot esculenta
Mapoly0004s0005 Marchantia polymorpha
MBI14_g04912_MAGBIO Magnolia biondii
MCO09G056 Micromonas commoda
MD09G1222300 Malus domestica
MD17G1215600 Malus domestica
Medtr4g009920 Medicago truncatula
MELO3C023442.2 Cucumis melo
Migut.I00744 Erythranthe guttata
MSTRG.11155 Avicennia marina
MSTRG.4700 Avicennia marina
Nitab4.5_0003072g0120 Nicotiana tabacum
Nitab4.5_0004013g0050 Nicotiana tabacum
Nn2g12167 Nelumbo nucifera
Nn8g39607 Nelumbo nucifera
Oeu004210.1 Olea europaea
Oeu004214.1 Olea europaea
Oeu018801.1 Olea europaea
Os04g0647800 Oryza sativa ssp. japonica
Peaxi162Scf00553g00628 Petunia axillaris
PGR102G2366 Punica granatum
PGSC0003DMG400014144 Solanum tuberosum
Phvul.010G157400 Phaseolus vulgaris
Potri.003G030900 Populus trichocarpa
Pp3c5_10000 Physcomitrium patens
PRCOL_00002221 Prasinoderma coloniale
Prupe.3G091800 Prunus persica
Psat7g257640 Pisum sativum
PSO017G7051 Papaver somniferum
PSO170G1430 Papaver somniferum
PSO478G0299 Papaver somniferum
QL05p032185 Quercus lobata
QL05p032218 Quercus lobata
RcHm_v2.0_Chr2g0134571 Rosa chinensis
Rhsim08G0211000 Rhododendron simsii
Sabra03G0017400 Salix brachista
SalBow6G0819 Salvia bowleyana
Sc10g0006040 Simmondsia chinensis
Sed0019835 Sechium edule
SEGI_06294 Sequoiadendron giganteum
SGA_v2.0_scaffold5G02725 Striga asiatica
SMO271G0060 Selaginella moellendorffii
Solyc03g117490.4 Solanum lycopersicum
Sopen03g036390 Solanum pennellii
Sp5g35360 Schrenkiella parvula
TAR383G0666 Trochodendron aralioides
TAR626G0098 Trochodendron aralioides
TAR626G1759 Trochodendron aralioides
THA.LOC104812468 Tarenaya hassleriana
Thecc.06G031800 Theobroma cacao
Thhalv10018399m.g Eutrema salsugineum
TPR.G12167 Trifolium pratense
TPR.G38649 Trifolium pratense
TPR.G38684 Trifolium pratense
TWI12G0864 Tripterygium wilfordii
unitig_699.g19091 Utricularia gibba
vmacro19016 Vaccinium macrocarpon
VMungo0331G1864 Vigna mungo
Zm00001eb068580 Zea mays

User provided reference genes

Program Settings