Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p31320 Brassica napus
A05p31330 Brassica napus
Aa31LG8G3600 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4665 Anthoceros agrestis
Actinidia34666 Actinidia chinensis
Ah.01g012750 Amaranthus hybridus
Ah.03g148550 Amaranthus hybridus
AL3G31560 Arabidopsis lyrata
Aqoxy4G01527 Aquilegia oxysepala
Aqoxy4G03088 Aquilegia oxysepala
Aqoxy7G01729 Aquilegia oxysepala
AT3G18310 Arabidopsis thaliana
ATR0022G053 Amborella trichopoda
ATR0194G001 Amborella trichopoda
ATR0446G001 Amborella trichopoda
ATR0560G003 Amborella trichopoda
ATR0560G006 Amborella trichopoda
ATR0661G336 Amborella trichopoda
ATR0661G406 Amborella trichopoda
ATR0691G134 Amborella trichopoda
ATR0792G001 Amborella trichopoda
ATR0964G004 Amborella trichopoda
ATR1192G001 Amborella trichopoda
ATR1192G002 Amborella trichopoda
AUR62032951 Chenopodium quinoa
BcaB01g01503 Brassica carinata
BcaB06g25876 Brassica carinata
BcaB06g25877 Brassica carinata
BcaB06g25878 Brassica carinata
BcaC05g28685 Brassica carinata
BolC5t33471H Brassica oleracea
BolC5t33472H Brassica oleracea
BolC5t33532H Brassica oleracea
BraA05t21970Z Brassica rapa
BraA05t21971Z Brassica rapa
C05p47510 Brassica napus
C05p47540 Brassica napus
C05p47630 Brassica napus
CAN.G1428.6 Capsicum annuum
CANSAT21G1743 Cannabis sativa
CARHR093680 Cardamine hirsuta
Carub.0003s1810 Capsella rubella
Ca_09724_v3 Cicer arietinum L.
Cc07_g15690 Coffea canephora
CDE04G1779 Ceratophyllum demersum
CDE09G0455 Ceratophyllum demersum
CDE09G0757 Ceratophyllum demersum
CDE12G0342 Ceratophyllum demersum
Cfa020657 Carpinus fangiana
Ciclev10000213m.g Citrus clementina
CiPaw.12G040000 Carya illinoinensis
CiPaw.12G046900 Carya illinoinensis
CiPaw.12G047000 Carya illinoinensis
CiPaw.16G081600 Carya illinoinensis
COL.COLO4_14552 Corchorus olitorius
COL.COLO4_21260 Corchorus olitorius
Cpa.g.sc3060.1 Carica papaya
Cpa.g.sc4881.1 Carica papaya
CsaV3_1G046170 Cucumis sativus L.
CSS0030547 Camellia sinensis var. sinensis
DCAR_009432 Daucus carota
Dinv36001 Davidia involucrata
Dinv39346 Davidia involucrata
Duzib116G0224 Durio zibethinus
ECA234G4090 Erigeron canadensis
ECA238G4368 Erigeron canadensis
Eucgr.C04176 Eucalyptus grandis
Eucgr.K02289 Eucalyptus grandis
FAN04G0730 Fragaria x ananassa
FAN13G0999 Fragaria x ananassa
FAN18G0597 Fragaria x ananassa
FvH4_5g25850 Fragaria vesca
Glyma.02G144000 Glycine max
Glyma.10G030100 Glycine max
Gohir.A11G329500 Gossypium hirsutum
Gohir.D11G289900 Gossypium hirsutum
Gohir.D11G348700 Gossypium hirsutum
Gorai.007G313800 Gossypium raimondii
Gorai.007G379000 Gossypium raimondii
HanXRQChr07g0196981 Helianthus annuus
Haze_18940 Corylus avellana
HPP92_000827 Vanilla planifolia
Hund17623 Selenicereus undatus
Hund25524 Selenicereus undatus
Lalb_Chr21g0307461 Lupinus albus
Lj5g0026700 Lotus japonicus
Lj8C411T10 Lonicera japonica
Lsat_1_v5_gn_8_70480 Lactuca sativa
Manes.14G172500 Manihot esculenta
Mapoly0100s0030 Marchantia polymorpha
MBI07_g11743_MAGBIO Magnolia biondii
MBI07_g37626_MAGBIO Magnolia biondii
MBI07_g44810_MAGBIO Magnolia biondii
MD04G1026400 Malus domestica
Medtr3g069120 Medicago truncatula
MELO3C021732.2 Cucumis melo
MELO3C027782.2 Cucumis melo
Migut.N02797 Erythranthe guttata
MSTRG.24391 Avicennia marina
Nitab4.5_0001423g0010 Nicotiana tabacum
Nitab4.5_0001903g0100 Nicotiana tabacum
Nitab4.5_0008354g0010 Nicotiana tabacum
Nn1g01729 Nelumbo nucifera
Oeu011014.1 Olea europaea
Oeu028553.1 Olea europaea
Oeu031657.1 Olea europaea
Os03g0240400 Oryza sativa ssp. japonica
Os09g0104700 Oryza sativa ssp. japonica
Peaxi162Scf00165g00216 Petunia axillaris
Peaxi162Scf00434g00066 Petunia axillaris
PGR044G2251 Punica granatum
PGSC0003DMG403028564 Solanum tuberosum
Phvul.011G090800 Phaseolus vulgaris
Potri.012G041300 Populus trichocarpa
Pp3c14_24820 Physcomitrium patens
Prupe.2G050600 Prunus persica
Psat5g128760 Pisum sativum
Psat5g200920 Pisum sativum
Psat6g058760 Pisum sativum
PSO210G0382 Papaver somniferum
PSO210G0907 Papaver somniferum
PSO384G0273 Papaver somniferum
PSO384G0711 Papaver somniferum
PSO407G0063 Papaver somniferum
QL04p019450 Quercus lobata
QL07p000534 Quercus lobata
QL07p000983 Quercus lobata
QL07p001298 Quercus lobata
QL09p016785 Quercus lobata
QL12p002487 Quercus lobata
RcHm_v2.0_Chr6g0264721 Rosa chinensis
RcHm_v2.0_Chr6g0264731 Rosa chinensis
RcHm_v2.0_Chr7g0216331 Rosa chinensis
Rhsim12G0029000 Rhododendron simsii
Sabra12G0028400 Salix brachista
SalBow3G2318 Salvia bowleyana
Sc14g0004510 Simmondsia chinensis
Sc22g0003820 Simmondsia chinensis
Sed0011179 Sechium edule
Sed0027926 Sechium edule
SEGI_03816 Sequoiadendron giganteum
SEGI_26180 Sequoiadendron giganteum
SEGI_28583 Sequoiadendron giganteum
SHI21683 Sapria himalayana
SMO203G0127 Selaginella moellendorffii
SMO297G0008 Selaginella moellendorffii
Solyc01g098450.4 Solanum lycopersicum
Sopen01g042020 Solanum pennellii
Sp3g16450 Schrenkiella parvula
TAR383G0351 Trochodendron aralioides
THA.LOC104803578 Tarenaya hassleriana
THA.LOC104807021 Tarenaya hassleriana
Thecc.05G018000 Theobroma cacao
Thhalv10003730m.g Eutrema salsugineum
Thhalv10020051m.g Eutrema salsugineum
TPR.G10330 Trifolium pratense
TWI31G0574 Tripterygium wilfordii
TWI60G1145 Tripterygium wilfordii
unitig_744.g24116 Utricularia gibba
vmacro01076 Vaccinium macrocarpon
VMungo1127G1998 Vigna mungo
VMungo1215G1527 Vigna mungo
Zm00001eb399070 Zea mays

User provided reference genes

Program Settings