Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p38300 Brassica napus
Aa31LG11G8590 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.294 Anthoceros agrestis
Actinidia01932 Actinidia chinensis
Actinidia05585 Actinidia chinensis
Actinidia05586 Actinidia chinensis
Ah.03g134710 Amaranthus hybridus
AL2G15710 Arabidopsis lyrata
AL6G40770 Arabidopsis lyrata
Aqoxy5G02588 Aquilegia oxysepala
Aqoxy7G01388 Aquilegia oxysepala
Aqoxy7G03800 Aquilegia oxysepala
Aqoxy7G04116 Aquilegia oxysepala
Aqoxy7G04117 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.AH329K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U3KJRG Arachis hypogaea
AT5G28740 Arabidopsis thaliana
ATR0564G130 Amborella trichopoda
ATR0753G003 Amborella trichopoda
ATR0753G017 Amborella trichopoda
ATR0753G142 Amborella trichopoda
Atru.chr10.1995 Acer truncatum
AUR62018141 Chenopodium quinoa
AUR62034479 Chenopodium quinoa
BcaB07g34174 Brassica carinata
BcaC03g17751 Brassica carinata
BcaNung05343 Brassica carinata
BolC2t11836H Brassica oleracea
BraA02t08811Z Brassica rapa
C02p57630 Brassica napus
CAN.G1131.23 Capsicum annuum
CANSAT78G1072 Cannabis sativa
CARHR185310 Cardamine hirsuta
Carub.0006s2599 Capsella rubella
Ca_00267_v3 Cicer arietinum L.
CBR_g3193 Chara braunii
Cc02_g12290 Coffea canephora
CDE04G1938 Ceratophyllum demersum
CDE07G0042 Ceratophyllum demersum
Cfa000363 Carpinus fangiana
Cfa023613 Carpinus fangiana
Ciclev10014187m.g Citrus clementina
CiPaw.09G158900 Carya illinoinensis
ClCG01G022630 Citrullus lanatus
COL.COLO4_30962 Corchorus olitorius
COL.COLO4_31569 Corchorus olitorius
Cpa.g.sc27.112 Carica papaya
Cre12.g513500 Chlamydomonas reinhardtii
CsaV3_6G049830 Cucumis sativus L.
DCAR_003206 Daucus carota
DCAR_025033 Daucus carota
Dinv39810 Davidia involucrata
Dinv40503 Davidia involucrata
Duzib235G0214 Durio zibethinus
ECA240G1068 Erigeron canadensis
ECA247G0108 Erigeron canadensis
ECA248G3185 Erigeron canadensis
EL10Ac6g13262 Beta vulgaris
Eucgr.E03448 Eucalyptus grandis
FAN11G2280 Fragaria x ananassa
FAN11G2522 Fragaria x ananassa
FAN16G0728 Fragaria x ananassa
FAN16G0751 Fragaria x ananassa
FAN21G0395 Fragaria x ananassa
FAN21G1982 Fragaria x ananassa
FAN21G3557 Fragaria x ananassa
FAN25G3232 Fragaria x ananassa
FvH4_3g03910 Fragaria vesca
FvH4_3g04150 Fragaria vesca
Glyma.13G245700 Glycine max
Glyma.15G068100 Glycine max
Gohir.A05G164800 Gossypium hirsutum
Gohir.D05G167800 Gossypium hirsutum
Gorai.009G172900 Gossypium raimondii
GSVIVG01006714001 Vitis vinifera
HanXRQChr01g0016091 Helianthus annuus
Haze_06562 Corylus avellana
Haze_26834 Corylus avellana
Hma1.2p1_0144F.1_g064800 Hydrangea macrophylla
HPP92_001864 Vanilla planifolia
HPP92_001897 Vanilla planifolia
Hund25208 Selenicereus undatus
Lalb_Chr11g0066351 Lupinus albus
Lalb_Chr23g0271291 Lupinus albus
Lj6g0004744 Lotus japonicus
Lj9A630T39 Lonicera japonica
Lsat_1_v5_gn_1_110001 Lactuca sativa
Manes.16G021600 Manihot esculenta
Manes.17G039900 Manihot esculenta
Mapoly0119s0057 Marchantia polymorpha
MBI11_g22684_MAGBIO Magnolia biondii
MBI19_g24733_MAGBIO Magnolia biondii
MCO01G142 Micromonas commoda
MD05G1324400 Malus domestica
MD10G1302200 Malus domestica
Medtr2g012310 Medicago truncatula
Medtr5g027050 Medicago truncatula
MELO3C007313.2 Cucumis melo
Migut.N01473 Erythranthe guttata
Migut.N01591 Erythranthe guttata
Migut.O00672 Erythranthe guttata
MSTRG.28076 Avicennia marina
Nitab4.5_0000634g0070 Nicotiana tabacum
Nitab4.5_0005198g0010 Nicotiana tabacum
Nn2g13017 Nelumbo nucifera
Nn4g24836 Nelumbo nucifera
Oeu015223.1 Olea europaea
Os01g0686600 Oryza sativa ssp. japonica
Os06g0235800 Oryza sativa ssp. japonica
Os07g0644300 Oryza sativa ssp. japonica
Peaxi162Scf00428g00711 Petunia axillaris
PGR042G1909 Punica granatum
PGSC0003DMG400006877 Solanum tuberosum
Phvul.006G191100 Phaseolus vulgaris
Phvul.006G191500 Phaseolus vulgaris
Potri.004G035600 Populus trichocarpa
Potri.011G043812 Populus trichocarpa
Pp3c1_10210 Physcomitrium patens
PRCOL_00006288 Prasinoderma coloniale
Prupe.4G035800 Prunus persica
Prupe.5G013200 Prunus persica
Psat1g208040 Pisum sativum
PSO339G3037 Papaver somniferum
PSO384G2756 Papaver somniferum
QL03p054350 Quercus lobata
QL05p081849 Quercus lobata
RcHm_v2.0_Chr5g0006191 Rosa chinensis
RcHm_v2.0_Chr5g0006201 Rosa chinensis
RcHm_v2.0_Chr5g0006601 Rosa chinensis
RcHm_v2.0_Chr7g0193971 Rosa chinensis
Rhsim07G0241400 Rhododendron simsii
Rhsim10G0099900 Rhododendron simsii
Rhsim13G0173900 Rhododendron simsii
RhsimUnG0236300 Rhododendron simsii
Sabra04G0021400 Salix brachista
Sabra04G0021600 Salix brachista
SalBow6G2379 Salvia bowleyana
Sc17g0006530 Simmondsia chinensis
Sed0027994 Sechium edule
SEGI_12412 Sequoiadendron giganteum
SEGI_14928 Sequoiadendron giganteum
SGA_v2.0_scaffold24G10682 Striga asiatica
SGA_v2.0_scaffold5G02978 Striga asiatica
SHI02082 Sapria himalayana
SMO358G0499 Selaginella moellendorffii
Solyc01g086990.3 Solanum lycopersicum
Sopen01g034000 Solanum pennellii
Sopen03g007850 Solanum pennellii
Sp2g20070 Schrenkiella parvula
TAR369G0028 Trochodendron aralioides
THA.LOC104799261 Tarenaya hassleriana
Thecc.06G197600 Theobroma cacao
Thhalv10003625m.g Eutrema salsugineum
TPR.G16428 Trifolium pratense
TPR.G36818 Trifolium pratense
TWI63G1169 Tripterygium wilfordii
unitig_578.g16698 Utricularia gibba
vmacro03828 Vaccinium macrocarpon
vmacro23297 Vaccinium macrocarpon
VMungo0464G0452 Vigna mungo
VMungo0540G2265 Vigna mungo
Zm00001eb110380 Zea mays
Zm00001eb329230 Zea mays

User provided reference genes

Program Settings