Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p02730 Brassica napus
A10p23900 Brassica napus
Aa31LG11G14670 Aethionema arabicum
Actinidia16933 Actinidia chinensis
Actinidia35741 Actinidia chinensis
AL6G25580 Arabidopsis lyrata
Aqoxy2G03548 Aquilegia oxysepala
Aqoxy3G02782 Aquilegia oxysepala
Aqoxy3G02967 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.F0HZWU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XDSK4Z Arachis hypogaea
AT5G14780 Arabidopsis thaliana
ATR0730G233 Amborella trichopoda
Atru.chr6.2295 Acer truncatum
AUR62040327 Chenopodium quinoa
AUR62043797 Chenopodium quinoa
BcaB08g36947 Brassica carinata
BcaC03g13445 Brassica carinata
BcaC04g19009 Brassica carinata
BcaNung03094 Brassica carinata
BolC2t06663H Brassica oleracea
BolC2t06665H Brassica oleracea
BolC9t59075H Brassica oleracea
BraA02t05244Z Brassica rapa
BraA10t44454Z Brassica rapa
C02p07330 Brassica napus
C09p62370 Brassica napus
CAN.G206.32 Capsicum annuum
CAN.G508.27 Capsicum annuum
CAN.G991.2 Capsicum annuum
CANSAT64G0084 Cannabis sativa
CARHR198530 Cardamine hirsuta
Carub.0001s3408 Capsella rubella
Carub.0006s1295 Capsella rubella
Carub.0018s0004 Capsella rubella
Carub.0030s0001 Capsella rubella
Ca_27954_v3 Cicer arietinum L.
Cc07_g02270 Coffea canephora
Cc09_g06160 Coffea canephora
CDE06G1412 Ceratophyllum demersum
Cfa007429 Carpinus fangiana
Cfa023380 Carpinus fangiana
Ciclev10015585m.g Citrus clementina
CiPaw.03G037800 Carya illinoinensis
CiPaw.04G024700 Carya illinoinensis
ClCG10G014220 Citrullus lanatus
COL.COLO4_28947 Corchorus olitorius
Cpa.g.sc39.91 Carica papaya
CsaV3_3G042420 Cucumis sativus L.
CSS0042726 Camellia sinensis var. sinensis
DCAR_021682 Daucus carota
Dinv33492 Davidia involucrata
Duzib147G0931 Durio zibethinus
ECA238G2781 Erigeron canadensis
EL10Ac4g08574 Beta vulgaris
Eucgr.J02207 Eucalyptus grandis
Eucgr.J02208 Eucalyptus grandis
Eucgr.J02209 Eucalyptus grandis
FAN05G4697 Fragaria x ananassa
FAN09G2584 Fragaria x ananassa
FAN14G3873 Fragaria x ananassa
FvH4_6g50630 Fragaria vesca
Glyma.13G168700 Glycine max
Glyma.19G009000 Glycine max
Glyma.19G009100 Glycine max
Gohir.A07G219700 Gossypium hirsutum
Gohir.D07G226500 Gossypium hirsutum
Gorai.001G261400 Gossypium raimondii
GSVIVG01032479001 Vitis vinifera
HanXRQChr04g0103861 Helianthus annuus
HanXRQChr12g0368051 Helianthus annuus
Haze_14668 Corylus avellana
Hma1.2p1_0993F.1_g245540 Hydrangea macrophylla
Hma1.2p1_2562F.1_g324430 Hydrangea macrophylla
HPP92_019950 Vanilla planifolia
HPP92_019961 Vanilla planifolia
Hund04695 Selenicereus undatus
Lalb_Chr02g0160291 Lupinus albus
Lj2g0017879 Lotus japonicus
Lj7A591G80 Lonicera japonica
Lsat_1_v5_gn_1_95460 Lactuca sativa
Lsat_1_v5_gn_2_92220 Lactuca sativa
Lsat_1_v5_gn_3_78501 Lactuca sativa
Manes.15G181900 Manihot esculenta
Manes.17G122100 Manihot esculenta
Mapoly0004s0175 Marchantia polymorpha
MBI16_g05652_MAGBIO Magnolia biondii
MBI16_g32801_MAGBIO Magnolia biondii
MCO11G798 Micromonas commoda
MD09G1034400 Malus domestica
MD17G1034800 Malus domestica
Medtr6g007170 Medicago truncatula
Medtr6g007175 Medicago truncatula
MELO3C009956.2 Cucumis melo
Migut.H00121 Erythranthe guttata
MSTRG.3172 Avicennia marina
Nitab4.5_0003337g0060 Nicotiana tabacum
Nitab4.5_0005176g0010 Nicotiana tabacum
Nn3g16884 Nelumbo nucifera
Oeu062918.1 Olea europaea
Os06g0486800 Oryza sativa ssp. japonica
Os06g0486900 Oryza sativa ssp. japonica
Peaxi162Scf00129g01035 Petunia axillaris
PGR083G1778 Punica granatum
PGSC0003DMG400000496 Solanum tuberosum
PGSC0003DMG400008744 Solanum tuberosum
PGSC0003DMG400026801 Solanum tuberosum
Phvul.004G014600 Phaseolus vulgaris
Phvul.004G014666 Phaseolus vulgaris
Phvul.004G014732 Phaseolus vulgaris
Phvul.004G014800 Phaseolus vulgaris
Potri.014G161300 Populus trichocarpa
Pp3c16_11630 Physcomitrium patens
PRCOL_00006211 Prasinoderma coloniale
Prupe.3G284000 Prunus persica
Psat1g041880 Pisum sativum
Psat1g056760 Pisum sativum
Psat1g058600 Pisum sativum
Psat2g103360 Pisum sativum
Psat2g111320 Pisum sativum
Psat2g182560 Pisum sativum
Psat3g078960 Pisum sativum
Psat4g027200 Pisum sativum
Psat5g059520 Pisum sativum
Psat5g235800 Pisum sativum
Psat5g236000 Pisum sativum
PSO170G5364 Papaver somniferum
QL02p076678 Quercus lobata
RcHm_v2.0_Chr2g0171431 Rosa chinensis
Rhsim08G0055000 Rhododendron simsii
Rhsim10G0022600 Rhododendron simsii
Sabra14G0123000 Salix brachista
Sc15g0002660 Simmondsia chinensis
Sed0024150 Sechium edule
SEGI_05498 Sequoiadendron giganteum
SEGI_20792 Sequoiadendron giganteum
SGA_v2.0_scaffold135G34861 Striga asiatica
SMO116G0169 Selaginella moellendorffii
Solyc02g086880.4 Solanum lycopersicum
Sopen02g031650 Solanum pennellii
Sp3g30980 Schrenkiella parvula
Sp6g29260 Schrenkiella parvula
TAR622G1110 Trochodendron aralioides
THA.LOC104822387 Tarenaya hassleriana
Thecc.04G008800 Theobroma cacao
Thhalv10012160m.g Eutrema salsugineum
Thhalv10013803m.g Eutrema salsugineum
TPR.G2289 Trifolium pratense
TWI56G1191 Tripterygium wilfordii
unitig_62.g23157 Utricularia gibba
vmacro05820 Vaccinium macrocarpon
vmacro05821 Vaccinium macrocarpon
vmacro18243 Vaccinium macrocarpon
VMungo0464G0267 Vigna mungo
VMungo0464G0725 Vigna mungo
VMungo0464G1014 Vigna mungo
VMungo0464G1046 Vigna mungo
Zm00001eb053990 Zea mays
Zm00001eb109380 Zea mays
Zm00001eb208450 Zea mays
Zm00001eb222940 Zea mays
Zm00001eb358390 Zea mays
Zm00001eb382240 Zea mays

User provided reference genes

Program Settings