Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p37650 Brassica napus
A02p37660 Brassica napus
A06p39040 Brassica napus
Aa31LG6G9700 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4413 Anthoceros agrestis
Actinidia09461 Actinidia chinensis
Actinidia23765 Actinidia chinensis
Ah.08g214750 Amaranthus hybridus
AL293U10030 Arabidopsis lyrata
AL8G21630 Arabidopsis lyrata
AL8G21650 Arabidopsis lyrata
AL8G21660 Arabidopsis lyrata
Aqoxy2G03940 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.J5WB5S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WFM4SD Arachis hypogaea
AT5G48630 Arabidopsis thaliana
AT5G48640 Arabidopsis thaliana
ATR0561G002 Amborella trichopoda
Atru.chr6.1442 Acer truncatum
AUR62001146 Chenopodium quinoa
AUR62016530 Chenopodium quinoa
BcaB06g27812 Brassica carinata
BcaB07g30037 Brassica carinata
BcaB07g30038 Brassica carinata
BcaC03g17667 Brassica carinata
BcaC03g17668 Brassica carinata
BcaC06g30774 Brassica carinata
BolC2t11736H Brassica oleracea
BolC2t11738H Brassica oleracea
BolC2t11741H Brassica oleracea
BolC2t11742H Brassica oleracea
BolC2t11743H Brassica oleracea
BolC7t44450H Brassica oleracea
BraA02t08747Z Brassica rapa
BraA02t08748Z Brassica rapa
BraA06t26817Z Brassica rapa
C02p56710 Brassica napus
C02p56740 Brassica napus
C02p56750 Brassica napus
C07p39300 Brassica napus
CAN.G1010.1 Capsicum annuum
CAN.G1010.2 Capsicum annuum
CAN.G874.13 Capsicum annuum
CANSAT01G2987 Cannabis sativa
CARHR183320 Cardamine hirsuta
CARHR183330 Cardamine hirsuta
Carub.0005s0820 Capsella rubella
Carub.0005s0821 Capsella rubella
Carub.0008s0830 Capsella rubella
Carub.0008s0831 Capsella rubella
Cc01_g16560 Coffea canephora
CDE11G0402 Ceratophyllum demersum
Cfa021481 Carpinus fangiana
Ciclev10021820m.g Citrus clementina
CiPaw.13G050600 Carya illinoinensis
CiPaw.14G040200 Carya illinoinensis
ClCG02G000030 Citrullus lanatus
COL.COLO4_16102 Corchorus olitorius
Cre03.g174476 Chlamydomonas reinhardtii
CsaV3_2G019680 Cucumis sativus L.
CSS0012359 Camellia sinensis var. sinensis
DCAR_000515 Daucus carota
Dinv14524 Davidia involucrata
Duzib133G1079 Durio zibethinus
Duzib138G0860 Durio zibethinus
ECA236G4121 Erigeron canadensis
ECA248G3763 Erigeron canadensis
EL10Ac5g11649 Beta vulgaris
EL10Ac7g17932 Beta vulgaris
Eucgr.H00759 Eucalyptus grandis
Eucgr.L03048 Eucalyptus grandis
FAN15G2342 Fragaria x ananassa
FAN24G3552 Fragaria x ananassa
FAN27G2700 Fragaria x ananassa
FvH4_2g18390 Fragaria vesca
Glyma.08G347600 Glycine max
Glyma.18G159000 Glycine max
Gohir.A07G092400 Gossypium hirsutum
Gohir.A11G140100 Gossypium hirsutum
Gohir.D07G096900 Gossypium hirsutum
Gohir.D11G146500 Gossypium hirsutum
Gorai.001G104300 Gossypium raimondii
Gorai.007G156900 Gossypium raimondii
GSVIVG01006386001 Vitis vinifera
GSVIVG01006388001 Vitis vinifera
HanXRQChr01g0015361 Helianthus annuus
HanXRQChr04g0108291 Helianthus annuus
Haze_03347 Corylus avellana
Haze_26318 Corylus avellana
Hma1.2p1_0149F.1_g066510 Hydrangea macrophylla
HPP92_001407 Vanilla planifolia
Hund05584 Selenicereus undatus
Hund11162 Selenicereus undatus
Hund18441 Selenicereus undatus
Hund22149 Selenicereus undatus
Lalb_Chr01g0022191 Lupinus albus
Lalb_Chr19g0125891 Lupinus albus
Lj1g0001756 Lotus japonicus
Lj2A1122G39 Lonicera japonica
Lsat_1_v5_gn_3_115720 Lactuca sativa
Lsat_1_v5_gn_5_177641 Lactuca sativa
Manes.13G050900 Manihot esculenta
Mapoly0005s0080 Marchantia polymorpha
MBI07_g27657_MAGBIO Magnolia biondii
MD05G1169500 Malus domestica
MD10G1157700 Malus domestica
MD10G1158300 Malus domestica
Medtr7g021330 Medicago truncatula
Medtr7g055650 Medicago truncatula
MELO3C023189.2 Cucumis melo
Migut.D02511 Erythranthe guttata
MSTRG.17987 Avicennia marina
MSTRG.20974 Avicennia marina
Nitab4.5_0000403g0040 Nicotiana tabacum
Nitab4.5_0002671g0020 Nicotiana tabacum
Nitab4.5_0003020g0110 Nicotiana tabacum
Nitab4.5_0005866g0010 Nicotiana tabacum
Nn3g20066 Nelumbo nucifera
Os09g0504400 Oryza sativa ssp. japonica
Peaxi162Scf00487g00620 Petunia axillaris
Peaxi162Scf00711g00017 Petunia axillaris
PGR083G1823 Punica granatum
PGSC0003DMG401020104 Solanum tuberosum
Phvul.005G045433 Phaseolus vulgaris
Phvul.007G143100 Phaseolus vulgaris
Phvul.008G132450 Phaseolus vulgaris
Potri.002G246800 Populus trichocarpa
Potri.014G194900 Populus trichocarpa
Pp3c23_12870 Physcomitrium patens
Pp3c24_1910 Physcomitrium patens
PRCOL_00002525 Prasinoderma coloniale
Prupe.8G196700 Prunus persica
Psat3g149520 Pisum sativum
PSO017G6853 Papaver somniferum
PSO063G5689 Papaver somniferum
QL02p059745 Quercus lobata
QL02p059784 Quercus lobata
RcHm_v2.0_Chr6g0283781 Rosa chinensis
Sabra02G0187900 Salix brachista
SalBow6G5468 Salvia bowleyana
Sc05g0001910 Simmondsia chinensis
Sed0021622 Sechium edule
SEGI_10334 Sequoiadendron giganteum
SGA_v2.0_scaffold104G30089 Striga asiatica
SHI14518 Sapria himalayana
SMO147G0024 Selaginella moellendorffii
Solyc06g083260.3 Solanum lycopersicum
Sopen06g034640 Solanum pennellii
Sp2g19010 Schrenkiella parvula
Sp2g19020 Schrenkiella parvula
TAR365G0904 Trochodendron aralioides
THA.LOC104818977 Tarenaya hassleriana
THA.LOC104822487 Tarenaya hassleriana
THA.LOC104822488 Tarenaya hassleriana
Thecc.01G217400 Theobroma cacao
Thhalv10004803m.g Eutrema salsugineum
Thhalv10004814m.g Eutrema salsugineum
TPR.G6416 Trifolium pratense
TWI36G0336 Tripterygium wilfordii
unitig_0.g407 Utricularia gibba
vmacro14724 Vaccinium macrocarpon
VMungo1383G0758 Vigna mungo
Zm00001eb317580 Zea mays

User provided reference genes

Program Settings