Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Actinidia10221 Actinidia chinensis
Actinidia16411 Actinidia chinensis
Actinidia29632 Actinidia chinensis
Ah.02g129000 Amaranthus hybridus
Aqoxy6G02455 Aquilegia oxysepala
Aqoxy6G02509 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1Z0BUP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BL50ZB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G8H34X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K9IMQL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M6MJTX Arachis hypogaea
ATR0739G163 Amborella trichopoda
Atru.chr13.870 Acer truncatum
Atru.chr3.1057 Acer truncatum
AUR62037856 Chenopodium quinoa
AUR62041096 Chenopodium quinoa
Cc10_g07630 Coffea canephora
Cfa004386 Carpinus fangiana
Cfa013738 Carpinus fangiana
Cfa013739 Carpinus fangiana
Ciclev10026641m.g Citrus clementina
Ciclev10027255m.g Citrus clementina
Ciclev10029376m.g Citrus clementina
CiPaw.01G002200 Carya illinoinensis
CiPaw.07G172000 Carya illinoinensis
CiPaw.07G172100 Carya illinoinensis
CiPaw.08G052300 Carya illinoinensis
ClCG01G017790 Citrullus lanatus
ClCG05G026550 Citrullus lanatus
COL.COLO4_11612 Corchorus olitorius
COL.COLO4_28460 Corchorus olitorius
COL.COLO4_28461 Corchorus olitorius
Cpa.g.c31093.6 Carica papaya
CsaV3_4G035270 Cucumis sativus L.
CsaV3_6G044310 Cucumis sativus L.
CSS0048752 Camellia sinensis var. sinensis
DCAR_009867 Daucus carota
DCAR_020064 Daucus carota
Dinv23042 Davidia involucrata
Dinv26957 Davidia involucrata
Duzib187G1956 Durio zibethinus
ECA232G3441 Erigeron canadensis
ECA246G5098 Erigeron canadensis
EL10Ac6g13373 Beta vulgaris
Eucgr.F00095 Eucalyptus grandis
Eucgr.H02331 Eucalyptus grandis
FAN15G0380 Fragaria x ananassa
FAN19G1325 Fragaria x ananassa
FAN20G0770 Fragaria x ananassa
FAN23G2069 Fragaria x ananassa
FAN24G2816 Fragaria x ananassa
FAN26G0581 Fragaria x ananassa
FAN27G2237 Fragaria x ananassa
FAN28G2997 Fragaria x ananassa
FvH4_1g18210 Fragaria vesca
Glyma.05G108400 Glycine max
Glyma.06G048700 Glycine max
Glyma.06G048800 Glycine max
Glyma.14G089084 Glycine max
Glyma.14G089087 Glycine max
Glyma.17G158600 Glycine max
Glyma.17G232800 Glycine max
Glyma.17G232900 Glycine max
Gohir.A01G123550 Gossypium hirsutum
Gohir.A01G123600 Gossypium hirsutum
Gohir.A02G149800 Gossypium hirsutum
Gohir.A05G212000 Gossypium hirsutum
Gohir.A05G212200 Gossypium hirsutum
Gohir.A06G025600 Gossypium hirsutum
Gohir.A06G025700 Gossypium hirsutum
Gohir.A11G212400 Gossypium hirsutum
Gohir.A12G080100 Gossypium hirsutum
Gohir.D01G111366 Gossypium hirsutum
Gohir.D01G111432 Gossypium hirsutum
Gohir.D03G030600 Gossypium hirsutum
Gohir.D05G215300 Gossypium hirsutum
Gohir.D05G215433 Gossypium hirsutum
Gohir.D06G022700 Gossypium hirsutum
Gohir.D06G022800 Gossypium hirsutum
Gohir.D12G076800 Gossypium hirsutum
Gorai.002G136100 Gossypium raimondii
Gorai.002G136200 Gossypium raimondii
Gorai.003G032200 Gossypium raimondii
Gorai.007G226200 Gossypium raimondii
Gorai.008G085600 Gossypium raimondii
Gorai.009G222000 Gossypium raimondii
Gorai.010G027300 Gossypium raimondii
Gorai.010G027400 Gossypium raimondii
GSVIVG01009301001 Vitis vinifera
Haze_15027 Corylus avellana
Haze_22391 Corylus avellana
Hma1.2p1_1139F.1_g260880 Hydrangea macrophylla
Lalb_Chr09g0335521 Lupinus albus
Lalb_Chr24g0399511 Lupinus albus
Lj4g0026806 Lotus japonicus
Lj5g0002019 Lotus japonicus
Lj5g0011909 Lotus japonicus
Lsat_1_v5_gn_3_86260 Lactuca sativa
Lsat_1_v5_gn_4_159841 Lactuca sativa
Manes.05G183500 Manihot esculenta
Manes.05G183600 Manihot esculenta
Manes.13G109200 Manihot esculenta
MBI16_g06081_MAGBIO Magnolia biondii
MBI16_g41241_MAGBIO Magnolia biondii
Medtr1g017500 Medicago truncatula
Medtr4g097480 Medicago truncatula
MELO3C016838.2 Cucumis melo
Migut.C00473 Erythranthe guttata
Migut.H00325 Erythranthe guttata
MSTRG.23654 Avicennia marina
MSTRG.25022 Avicennia marina
Nn5g30662 Nelumbo nucifera
Oeu014288.1 Olea europaea
Oeu021452.1 Olea europaea
Oeu047228.1 Olea europaea
Oeu053645.1 Olea europaea
PGSC0003DMG400004968 Solanum tuberosum
PGSC0003DMG400021404 Solanum tuberosum
Phvul.001G030800 Phaseolus vulgaris
Phvul.003G233000 Phaseolus vulgaris
Phvul.009G074000 Phaseolus vulgaris
Potri.007G007000 Populus trichocarpa
Potri.014G012900 Populus trichocarpa
Potri.014G013000 Populus trichocarpa
Prupe.1G419200 Prunus persica
Prupe.1G419300 Prunus persica
Prupe.6G217200 Prunus persica
Psat0ss26165g0240 Pisum sativum
Psat6g017280 Pisum sativum
QL06p038960 Quercus lobata
RcHm_v2.0_Chr2g0108721 Rosa chinensis
Rhsim07G0217500 Rhododendron simsii
Rhsim08G0090500 Rhododendron simsii
Sabra07G0005300 Salix brachista
Sabra14G0007800 Salix brachista
SalBow3G0220 Salvia bowleyana
SalBow4G3082 Salvia bowleyana
Sc02g0008110 Simmondsia chinensis
Sc03g0002520 Simmondsia chinensis
Sc24g0002340 Simmondsia chinensis
Sed0021979 Sechium edule
Sed0022430 Sechium edule
Sed0025721 Sechium edule
SGA_v2.0_scaffold15G07499 Striga asiatica
SGA_v2.0_scaffold238G43910 Striga asiatica
Sopen02g036650 Solanum pennellii
Sopen04g031150 Solanum pennellii
TAR376G0587 Trochodendron aralioides
TAR381G0867 Trochodendron aralioides
TAR628G1097 Trochodendron aralioides
Thecc.01G076000 Theobroma cacao
Thecc.08G084600 Theobroma cacao
Thecc.08G084700 Theobroma cacao
TPR.G13020 Trifolium pratense
TPR.G13134 Trifolium pratense
TPR.G3735 Trifolium pratense
unitig_37.g13114 Utricularia gibba
unitig_747.g21552 Utricularia gibba
unitig_749.g13883 Utricularia gibba
VMungo0251G0145 Vigna mungo
VMungo0647G0350 Vigna mungo
VMungo0647G1960 Vigna mungo
VMungo1309G2313 Vigna mungo

User provided reference genes

Program Settings