Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p02180 Brassica napus
A10p24570 Brassica napus
Aa31sc919G10 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2201 Anthoceros agrestis
Ah.10g038600 Amaranthus hybridus
AL6G24400 Arabidopsis lyrata
Aqoxy1G00322 Aquilegia oxysepala
Aqoxy2G02029 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0NW2H0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.13N2B5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.516IJ7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EWEG8C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F9QUKJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M3J26F Arachis hypogaea
AT5G13780 Arabidopsis thaliana
ATR0322G021 Amborella trichopoda
Atru.chr11.2514 Acer truncatum
BcaC04g19081 Brassica carinata
BcaC04g24254 Brassica carinata
BcaC08g43425 Brassica carinata
BcaNung04183 Brassica carinata
BcaNung04185 Brassica carinata
BolC2t06589H Brassica oleracea
BolC9t59169H Brassica oleracea
C02p06430 Brassica napus
C09p63320 Brassica napus
CAN.G909.3 Capsicum annuum
CANSAT80G0460 Cannabis sativa
CARHR199660 Cardamine hirsuta
Carub.0006s1196 Capsella rubella
Ca_27724_v3 Cicer arietinum L.
CBR_g48990 Chara braunii
Cc02_g28810 Coffea canephora
CDE02G0928 Ceratophyllum demersum
CDE08G0672 Ceratophyllum demersum
Cfa010811 Carpinus fangiana
Cfa022421 Carpinus fangiana
Ciclev10032739m.g Citrus clementina
CiPaw.13G008000 Carya illinoinensis
CiPaw.14G003300 Carya illinoinensis
ClCG09G004420 Citrullus lanatus
Cpa.g.sc125.49 Carica papaya
Cre08.g364450 Chlamydomonas reinhardtii
CsaV3_7G030720 Cucumis sativus L.
CSS0031731 Camellia sinensis var. sinensis
DCAR_003226 Daucus carota
DCAR_022372 Daucus carota
DCAR_022374 Daucus carota
Dinv07431 Davidia involucrata
Dinv43403 Davidia involucrata
Duzib133G1108 Durio zibethinus
Duzib138G1825 Durio zibethinus
ECA233G5526 Erigeron canadensis
EL10Ac2g04370 Beta vulgaris
Eucgr.J01208 Eucalyptus grandis
FAN01G2033 Fragaria x ananassa
FAN03G0770 Fragaria x ananassa
FAN10G3956 Fragaria x ananassa
FvH4_7g01790 Fragaria vesca
Glyma.04G142300 Glycine max
Glyma.11G159648 Glycine max
Glyma.14G029300 Glycine max
Gohir.A11G135400 Gossypium hirsutum
Gohir.D11G141700 Gossypium hirsutum
Gorai.007G152100 Gossypium raimondii
GSVIVG01032214001 Vitis vinifera
HanXRQChr03g0082771 Helianthus annuus
HanXRQChr08g0226841 Helianthus annuus
Haze_03145 Corylus avellana
Haze_03148 Corylus avellana
Haze_26658 Corylus avellana
Hma1.2p1_0685F.1_g203240 Hydrangea macrophylla
Hma1.2p1_2740F.1_g327740 Hydrangea macrophylla
HPP92_012859 Vanilla planifolia
Lalb_Chr04g0263831 Lupinus albus
Lj3g0001707 Lotus japonicus
Lj7C576T11 Lonicera japonica
Lj9A641T66 Lonicera japonica
Lsat_1_v5_gn_6_17421 Lactuca sativa
Lsat_1_v5_gn_6_74341 Lactuca sativa
Manes.07G010700 Manihot esculenta
Manes.10G136000 Manihot esculenta
Mapoly0014s0153 Marchantia polymorpha
MBI19_g12816_MAGBIO Magnolia biondii
MCO11G341 Micromonas commoda
MD02G1300400 Malus domestica
MD02G1300500 Malus domestica
MD07G1016300 Malus domestica
MD07G1016800 Malus domestica
MD07G1023300 Malus domestica
Medtr3g030055 Medicago truncatula
Medtr3g034200 Medicago truncatula
MELO3C023584.2 Cucumis melo
Migut.B01260 Erythranthe guttata
Migut.N01799 Erythranthe guttata
MSTRG.17006 Avicennia marina
Nitab4.5_0000087g0120 Nicotiana tabacum
Nitab4.5_0001244g0050 Nicotiana tabacum
Nitab4.5_0001676g0100 Nicotiana tabacum
Nitab4.5_0008942g0030 Nicotiana tabacum
Nn2g15193 Nelumbo nucifera
Oeu014596.2 Olea europaea
Oeu047606.1 Olea europaea
Os04g0635800 Oryza sativa ssp. japonica
Peaxi162Scf00071g01032 Petunia axillaris
Peaxi162Scf01270g00125 Petunia axillaris
PGR031G1630 Punica granatum
PGSC0003DMG400006777 Solanum tuberosum
Phvul.005G035200 Phaseolus vulgaris
Phvul.011G183200 Phaseolus vulgaris
Potri.001G261800 Populus trichocarpa
Potri.009G056600 Populus trichocarpa
Pp3c18_3810 Physcomitrium patens
Pp3c7_5970 Physcomitrium patens
PRCOL_00004224 Prasinoderma coloniale
Prupe.2G024200 Prunus persica
Psat5g212520 Pisum sativum
PSO339G1308 Papaver somniferum
PSO339G1526 Papaver somniferum
PSO339G2857 Papaver somniferum
PSO339G2935 Papaver somniferum
PSO339G3802 Papaver somniferum
PSO384G0095 Papaver somniferum
PSO384G0821 Papaver somniferum
PSO384G1143 Papaver somniferum
PSO384G1687 Papaver somniferum
PSO384G2386 Papaver somniferum
PSO384G2456 Papaver somniferum
PSO384G3036 Papaver somniferum
PSO384G5131 Papaver somniferum
QL04p010049 Quercus lobata
RcHm_v2.0_Chr1g0318401 Rosa chinensis
Rhsim01G0125000 Rhododendron simsii
Sabra09G0041400 Salix brachista
Sabra16G0160600 Salix brachista
SalBow6G0878 Salvia bowleyana
Sc11g0003930 Simmondsia chinensis
Sc11g0009030 Simmondsia chinensis
Sed0009169 Sechium edule
Sed0022614 Sechium edule
SEGI_02460 Sequoiadendron giganteum
SGA_v2.0_scaffold119G32765 Striga asiatica
SGA_v2.0_scaffold4G02481 Striga asiatica
SMO137G0156 Selaginella moellendorffii
Solyc01g087900.3 Solanum lycopersicum
Sopen01g034830 Solanum pennellii
Sp6g30240 Schrenkiella parvula
TAR623G1010 Trochodendron aralioides
TAR633G1565 Trochodendron aralioides
THA.LOC104809846 Tarenaya hassleriana
THA.LOC104819106 Tarenaya hassleriana
Thecc.01G406300 Theobroma cacao
Thhalv10014756m.g Eutrema salsugineum
TPR.G14549 Trifolium pratense
TWI09G0624 Tripterygium wilfordii
TWI53G0951 Tripterygium wilfordii
TWI53G1910 Tripterygium wilfordii
unitig_37.g12366 Utricularia gibba
unitig_46.g18668 Utricularia gibba
vmacro17359 Vaccinium macrocarpon
VMungo1080G0077 Vigna mungo
VMungo1127G0768 Vigna mungo
Zm00001eb069290 Zea mays
Zm00001eb431690 Zea mays

User provided reference genes

Program Settings