Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p19990 Brassica napus
A04p27710 Brassica napus
A04p27720 Brassica napus
A05p09630 Brassica napus
Aa31LG5G21330 Aethionema arabicum
Actinidia05416 Actinidia chinensis
Actinidia24387 Actinidia chinensis
Ah.08g210480 Amaranthus hybridus
Ah.15g090700 Amaranthus hybridus
AL4G32310 Arabidopsis lyrata
Aqoxy4G02741 Aquilegia oxysepala
AT2G36210 Arabidopsis thaliana
ATR0820G248 Amborella trichopoda
Atru.chr8.1474 Acer truncatum
AUR62006201 Chenopodium quinoa
AUR62037017 Chenopodium quinoa
BcaB02g09376 Brassica carinata
BcaB06g28921 Brassica carinata
BcaB06g28922 Brassica carinata
BcaC02g07622 Brassica carinata
BcaC02g07623 Brassica carinata
BcaC02g11723 Brassica carinata
BcaNung07100 Brassica carinata
BNapus_Darmor_BZH_scaffold_239p00050 Brassica napus
BolC3t14739H Brassica oleracea
BolC4t22841H Brassica oleracea
BolC4t28002H Brassica oleracea
BolC4t28003H Brassica oleracea
BraA03t11250Z Brassica rapa
BraA04t18265Z Brassica rapa
BraA04t18266Z Brassica rapa
BraA05t19917Z Brassica rapa
C03p23430 Brassica napus
C04p11970 Brassica napus
C04p65230 Brassica napus
CAN.G1069.14 Capsicum annuum
CAN.G334.10 Capsicum annuum
CAN.G397.68 Capsicum annuum
CANSAT64G0698 Cannabis sativa
CARHR130450 Cardamine hirsuta
Carub.0004s1797 Capsella rubella
Ca_00894_v3 Cicer arietinum L.
Cc06_g06020 Coffea canephora
Cfa016626 Carpinus fangiana
Ciclev10013674m.g Citrus clementina
CiPaw.09G015700 Carya illinoinensis
CiPaw.10G011300 Carya illinoinensis
ClCG04G010130 Citrullus lanatus
ClCG10G018840 Citrullus lanatus
COL.COLO4_29698 Corchorus olitorius
Cpa.g.sc104.113 Carica papaya
CsaV3_3G037390 Cucumis sativus L.
CsaV3_6G040760 Cucumis sativus L.
CSS0035781 Camellia sinensis var. sinensis
DCAR_013403 Daucus carota
Dinv21188 Davidia involucrata
Dinv21191 Davidia involucrata
Dinv31701 Davidia involucrata
Duzib093G2130 Durio zibethinus
Duzib128G1821 Durio zibethinus
ECA247G2615 Erigeron canadensis
ECA247G4096 Erigeron canadensis
EL10Ac7g16899 Beta vulgaris
Eucgr.K02026 Eucalyptus grandis
Eucgr.K02555 Eucalyptus grandis
FAN02G1065 Fragaria x ananassa
FAN05G1627 Fragaria x ananassa
FAN09G0518 Fragaria x ananassa
FAN09G1586 Fragaria x ananassa
FAN14G3391 Fragaria x ananassa
FvH4_6g19170 Fragaria vesca
Glyma.02G202200 Glycine max
Glyma.03G197200 Glycine max
Glyma.10G074500 Glycine max
Glyma.19G195200 Glycine max
Gohir.A04G061700 Gossypium hirsutum
Gohir.A09G140000 Gossypium hirsutum
Gohir.D09G134500 Gossypium hirsutum
Gorai.006G154300 Gossypium raimondii
Gorai.009G400900 Gossypium raimondii
GSVIVG01033868001 Vitis vinifera
HanXRQChr04g0103581 Helianthus annuus
HanXRQChr05g0133581 Helianthus annuus
HanXRQChr06g0176121 Helianthus annuus
HanXRQChr08g0229791 Helianthus annuus
HanXRQChr08g0229801 Helianthus annuus
HanXRQChr09g0260061 Helianthus annuus
HanXRQChr10g0301211 Helianthus annuus
HanXRQChr17g0542711 Helianthus annuus
Haze_19631 Corylus avellana
Lalb_Chr02g0154871 Lupinus albus
Lalb_Chr06g0172431 Lupinus albus
Lj1g0017412 Lotus japonicus
Lj5g0007516 Lotus japonicus
Lsat_1_v5_gn_3_39160 Lactuca sativa
Lsat_1_v5_gn_3_39200 Lactuca sativa
Lsat_1_v5_gn_4_65581 Lactuca sativa
Lsat_1_v5_gn_8_78180 Lactuca sativa
Lsat_1_v5_gn_9_20800 Lactuca sativa
Lsat_1_v5_gn_9_20900 Lactuca sativa
Manes.08G026900 Manihot esculenta
Manes.09G053700 Manihot esculenta
MBI17_g42229_MAGBIO Magnolia biondii
MBI17_g46660_MAGBIO Magnolia biondii
MD12G1027600 Malus domestica
MD14G1028000 Malus domestica
Medtr1g059770 Medicago truncatula
Medtr7g104940 Medicago truncatula
Medtr7g104950 Medicago truncatula
MELO3C009483.2 Cucumis melo
MELO3C024553.2 Cucumis melo
Migut.L01792 Erythranthe guttata
MSTRG.26633 Avicennia marina
Nitab4.5_0000692g0170 Nicotiana tabacum
Nitab4.5_0001933g0020 Nicotiana tabacum
Nn2g14194 Nelumbo nucifera
Nn6g34853 Nelumbo nucifera
Oeu023809.1 Olea europaea
Oeu025670.1 Olea europaea
Oeu047206.1 Olea europaea
Oeu047207.1 Olea europaea
Oeu047854.1 Olea europaea
Peaxi162Scf00096g00052 Petunia axillaris
Peaxi162Scf00166g00132 Petunia axillaris
PGR004G2330 Punica granatum
PGSC0003DMG400008950 Solanum tuberosum
PGSC0003DMG400028254 Solanum tuberosum
Phvul.007G227100 Phaseolus vulgaris
Potri.006G211000 Populus trichocarpa
Prupe.7G104000 Prunus persica
Psat0s34g0040 Pisum sativum
Psat3g032080 Pisum sativum
PSO339G3415 Papaver somniferum
PSO384G4360 Papaver somniferum
PSO801G0594 Papaver somniferum
QL07p038584 Quercus lobata
RcHm_v2.0_Chr3g0474301 Rosa chinensis
Rhsim03G0074000 Rhododendron simsii
Sabra06G0162500 Salix brachista
Sabra06G0162600 Salix brachista
SalBow5G4557 Salvia bowleyana
Sc02g0000350 Simmondsia chinensis
Sed0011389 Sechium edule
Sed0016679 Sechium edule
SEGI_24114 Sequoiadendron giganteum
SGA_v2.0_scaffold13G06708 Striga asiatica
SGA_v2.0_scaffold35G14049 Striga asiatica
Solyc09g009980.3 Solanum lycopersicum
Solyc10g083320.3 Solanum lycopersicum
Sopen09g004730 Solanum pennellii
Sopen10g032800 Solanum pennellii
Sp4g18430 Schrenkiella parvula
TAR369G0485 Trochodendron aralioides
TAR633G1312 Trochodendron aralioides
TAR636G2399 Trochodendron aralioides
THA.LOC104823491 Tarenaya hassleriana
Thecc.05G091800 Theobroma cacao
Thhalv10017557m.g Eutrema salsugineum
TPR.G14769 Trifolium pratense
TPR.G23329 Trifolium pratense
TWI53G1092 Tripterygium wilfordii
TWI74G0598 Tripterygium wilfordii
VMungo0720G1555 Vigna mungo
VMungo1383G0901 Vigna mungo

User provided reference genes

Program Settings