Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p16650 Brassica napus
A02p12200 Brassica napus
A03p55930 Brassica napus
Aa31LG3G8080 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1037 Anthoceros agrestis
Actinidia13553 Actinidia chinensis
Actinidia25039 Actinidia chinensis
Actinidia25040 Actinidia chinensis
Ah.07g208280 Amaranthus hybridus
Ah.07g208290 Amaranthus hybridus
Ah.13g067390 Amaranthus hybridus
Ah.13g067400 Amaranthus hybridus
AL7G27770 Arabidopsis lyrata
AL8G25890 Arabidopsis lyrata
Aqoxy5G02473 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.68Z3SV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B3RUP4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D2VJYT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I7AZF3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MPK6QZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NLN73P Arachis hypogaea
AT4G25360 Arabidopsis thaliana
AT5G51640 Arabidopsis thaliana
ATR0626G084 Amborella trichopoda
Atru.chr1.632 Acer truncatum
AUR62016101 Chenopodium quinoa
AUR62016102 Chenopodium quinoa
AUR62035049 Chenopodium quinoa
AUR62043454 Chenopodium quinoa
AUR62043455 Chenopodium quinoa
BcaB05g23996 Brassica carinata
BcaC03g14587 Brassica carinata
BcaC09g50785 Brassica carinata
BcaNung03687 Brassica carinata
BolC1t02014H Brassica oleracea
BolC2t08165H Brassica oleracea
BolC7t45909H Brassica oleracea
BraA01t01619Z Brassica rapa
BraA02t06285Z Brassica rapa
BraA03t14664Z Brassica rapa
C01p20870 Brassica napus
C02p20310 Brassica napus
C07p54230 Brassica napus
CAN.G1022.1 Capsicum annuum
CANSAT21G0829 Cannabis sativa
CARHR232770 Cardamine hirsuta
CARHR264410 Cardamine hirsuta
Carub.0007s1565 Capsella rubella
Ca_09891_v3 Cicer arietinum L.
Ca_26394_v3 Cicer arietinum L.
Ca_29799_v3 Cicer arietinum L.
Cc02_g03880 Coffea canephora
Cc09_g08790 Coffea canephora
CDE02G1818 Ceratophyllum demersum
CDE09G0813 Ceratophyllum demersum
Ciclev10004704m.g Citrus clementina
CiPaw.03G097100 Carya illinoinensis
ClCG05G022190 Citrullus lanatus
COL.COLO4_14182 Corchorus olitorius
Cpa.g.sc3.269 Carica papaya
CsaV3_5G034930 Cucumis sativus L.
CSS0027272 Camellia sinensis var. sinensis
CSS0032180 Camellia sinensis var. sinensis
DCAR_014611 Daucus carota
DCAR_018127 Daucus carota
DCAR_020223 Daucus carota
Dinv28532 Davidia involucrata
Duzib068G1245 Durio zibethinus
Duzib084G0306 Durio zibethinus
Duzib205G1439 Durio zibethinus
ECA233G3579 Erigeron canadensis
EL10Ac3g05792 Beta vulgaris
Eucgr.K00144 Eucalyptus grandis
FAN03G0263 Fragaria x ananassa
FAN03G2596 Fragaria x ananassa
FAN03G3387 Fragaria x ananassa
FAN10G0393 Fragaria x ananassa
FvH4_7g28200 Fragaria vesca
Glyma.10G178200 Glycine max
Glyma.20G212000 Glycine max
Gohir.A07G039600 Gossypium hirsutum
Gohir.A12G264000 Gossypium hirsutum
Gohir.D07G043700 Gossypium hirsutum
Gohir.D12G264200 Gossypium hirsutum
Gorai.001G046700 Gossypium raimondii
Gorai.008G283500 Gossypium raimondii
GSVIVG01018511001 Vitis vinifera
HanXRQChr05g0141391 Helianthus annuus
HanXRQChr08g0224031 Helianthus annuus
Haze_13823 Corylus avellana
Hma1.2p1_0099F.1_g048860 Hydrangea macrophylla
Hma1.2p1_0099F.1_g048900 Hydrangea macrophylla
Hma1.2p1_0654F.1_g196390 Hydrangea macrophylla
HPP92_026250 Vanilla planifolia
Hund04639 Selenicereus undatus
Hund04640 Selenicereus undatus
Hund04641 Selenicereus undatus
Hund11794 Selenicereus undatus
Lalb_Chr02g0149951 Lupinus albus
Lalb_Chr06g0168921 Lupinus albus
Lalb_Chr21g0311891 Lupinus albus
Lalb_Chr21g0311901 Lupinus albus
Lj1A984T88 Lonicera japonica
Lj2g0001055 Lotus japonicus
Lj5g0024374 Lotus japonicus
Lj8A36G59 Lonicera japonica
Lsat_1_v5_gn_8_8140 Lactuca sativa
Manes.06G138100 Manihot esculenta
Manes.14G033000 Manihot esculenta
Mapoly0002s0044 Marchantia polymorpha
MD01G1185900 Malus domestica
MD07G1258100 Malus domestica
Medtr1g076690 Medicago truncatula
Medtr6g061710 Medicago truncatula
MELO3C012303.2 Cucumis melo
Migut.F00427 Erythranthe guttata
MSTRG.27168 Avicennia marina
MSTRG.8423 Avicennia marina
Nitab4.5_0000072g0350 Nicotiana tabacum
Nitab4.5_0006649g0010 Nicotiana tabacum
Nn5g27454 Nelumbo nucifera
Oeu022510.1 Olea europaea
Oeu042586.1 Olea europaea
Os01g0914800 Oryza sativa ssp. japonica
Peaxi162Scf01372g00043 Petunia axillaris
PGR142G2566 Punica granatum
PGSC0003DMG400031026 Solanum tuberosum
Phvul.007G111400 Phaseolus vulgaris
Potri.012G129700 Populus trichocarpa
Potri.015G131600 Populus trichocarpa
Pp3c1_40460 Physcomitrium patens
Prupe.2G282500 Prunus persica
Psat1g111400 Pisum sativum
Psat6g112640 Pisum sativum
PSO170G1740 Papaver somniferum
QL12p039478 Quercus lobata
RcHm_v2.0_Chr1g0375151 Rosa chinensis
Rhsim03G0163300 Rhododendron simsii
Rhsim03G0171500 Rhododendron simsii
Rhsim09G0193600 Rhododendron simsii
RhsimUnG0154100 Rhododendron simsii
Sabra12G0097600 Salix brachista
Sabra15G0144600 Salix brachista
SalBow4G1388 Salvia bowleyana
Sc19g0001850 Simmondsia chinensis
Sed0003474 Sechium edule
Sed0010454 Sechium edule
SEGI_11488 Sequoiadendron giganteum
SGA_v2.0_scaffold2G01136 Striga asiatica
SMO223G0023 Selaginella moellendorffii
Solyc03g007120.3 Solanum lycopersicum
Sopen03g003110 Solanum pennellii
Sp6g13850 Schrenkiella parvula
TAR381G1244 Trochodendron aralioides
THA.LOC104811508 Tarenaya hassleriana
Thecc.03G161700 Theobroma cacao
Thhalv10013411m.g Eutrema salsugineum
Thhalv10024876m.g Eutrema salsugineum
TPR.G10658 Trifolium pratense
TPR.G16616 Trifolium pratense
TWI14G1151 Tripterygium wilfordii
TWI39G0066 Tripterygium wilfordii
vmacro09886 Vaccinium macrocarpon
VMungo0720G2641 Vigna mungo
Zm00001eb364910 Zea mays

User provided reference genes

Program Settings