Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p37840 Brassica napus
A02p25050 Brassica napus
A03p30730 Brassica napus
A10p01890 Brassica napus
Aa31LG5G2500 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.315 Anthoceros agrestis
Actinidia00729 Actinidia chinensis
Actinidia24316 Actinidia chinensis
AL1G12850 Arabidopsis lyrata
AL6G50010 Arabidopsis lyrata
Aqoxy2G03230 Aquilegia oxysepala
Aqoxy5G00541 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.59R5K9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F0KDF8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HAWP0L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K8THJN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LMB138 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QFAY72 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U9BU7H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V8R19R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z8WERX Arachis hypogaea
AT1G03340 Arabidopsis thaliana
AT4G02920 Arabidopsis thaliana
ATR0665G655 Amborella trichopoda
Atru.chr5.1352 Acer truncatum
AUR62033710 Chenopodium quinoa
AUR62036816 Chenopodium quinoa
BcaB01g02487 Brassica carinata
BcaB04g19084 Brassica carinata
BcaC01g06721 Brassica carinata
BcaC01g06723 Brassica carinata
BcaC02g12834 Brassica carinata
BcaC03g16190 Brassica carinata
BcaC05g24539 Brassica carinata
BcaC09g50477 Brassica carinata
BolC2t09985H Brassica oleracea
BolC3t16035H Brassica oleracea
BolC4t25502H Brassica oleracea
BolC5t28964H Brassica oleracea
BraA02t06770Z Brassica rapa
BraA02t07493Z Brassica rapa
BraA03t12252Z Brassica rapa
BraA10t42462Z Brassica rapa
C02p39720 Brassica napus
C03p37430 Brassica napus
C04p39350 Brassica napus
CANSAT25G0924 Cannabis sativa
CARHR002650 Cardamine hirsuta
CARHR251290 Cardamine hirsuta
Carub.0001s0245 Capsella rubella
Carub.0006s3417 Capsella rubella
Ca_08561_v3 Cicer arietinum L.
Ca_08595_v3 Cicer arietinum L.
Ca_10403_v3 Cicer arietinum L.
Cc01_g19820 Coffea canephora
CDE05G2296 Ceratophyllum demersum
CDE11G0853 Ceratophyllum demersum
Cfa006097 Carpinus fangiana
Ciclev10020315m.g Citrus clementina
CiPaw.07G095100 Carya illinoinensis
CiPaw.08G102900 Carya illinoinensis
ClCG07G000110 Citrullus lanatus
Cpa.g.sc9.119 Carica papaya
CsaV3_6G036930 Cucumis sativus L.
CSS0023044 Camellia sinensis var. sinensis
DCAR_005821 Daucus carota
DCAR_012450 Daucus carota
Dinv11260 Davidia involucrata
Duzib133G0805 Durio zibethinus
Duzib138G0912 Durio zibethinus
Duzib211G0472 Durio zibethinus
ECA248G2902 Erigeron canadensis
EL10Ac7g17207 Beta vulgaris
Eucgr.K03405 Eucalyptus grandis
FAN15G3549 Fragaria x ananassa
FAN20G0349 Fragaria x ananassa
FAN24G1933 Fragaria x ananassa
FAN27G0975 Fragaria x ananassa
FvH4_2g24050 Fragaria vesca
Glyma.02G149700 Glycine max
Glyma.03G150700 Glycine max
Glyma.05G088550 Glycine max
Glyma.10G024200 Glycine max
Glyma.19G153300 Glycine max
Gohir.A11G120100 Gossypium hirsutum
Gohir.A12G006400 Gossypium hirsutum
Gohir.D11G124800 Gossypium hirsutum
Gohir.D12G005800 Gossypium hirsutum
Gorai.007G133800 Gossypium raimondii
Gorai.008G005800 Gossypium raimondii
GSVIVG01011074001 Vitis vinifera
HanXRQChr01g0002441 Helianthus annuus
HanXRQChr02g0046661 Helianthus annuus
Haze_04757 Corylus avellana
Hma1.2p1_0257F.1_g103830 Hydrangea macrophylla
Hma1.2p1_0377F.1_g139390 Hydrangea macrophylla
Hma1.2p1_4080F.1_g338240 Hydrangea macrophylla
Lalb_Chr06g0163121 Lupinus albus
Lalb_Chr21g0306591 Lupinus albus
Lj1C43T4 Lonicera japonica
Lj1g0006875 Lotus japonicus
Lj2A1179G44 Lonicera japonica
Lj5g0001920 Lotus japonicus
Lsat_1_v5_gn_5_187500 Lactuca sativa
Manes.01G210500 Manihot esculenta
Mapoly0009s0096 Marchantia polymorpha
MBI17_g34956_MAGBIO Magnolia biondii
MD03G1269800 Malus domestica
MD11G1290800 Malus domestica
Medtr1g089980 Medicago truncatula
Medtr7g094470 Medicago truncatula
MELO3C014420.2 Cucumis melo
Migut.D00258 Erythranthe guttata
MSTRG.21579 Avicennia marina
Nitab4.5_0001323g0010 Nicotiana tabacum
Nitab4.5_0008204g0020 Nicotiana tabacum
Nn1g02136 Nelumbo nucifera
Nn4g26160 Nelumbo nucifera
Oeu011173.1 Olea europaea
Oeu041712.1 Olea europaea
Os05g0143300 Oryza sativa ssp. japonica
Peaxi162Scf00777g00211 Petunia axillaris
PGR044G2575 Punica granatum
PGSC0003DMG400003799 Solanum tuberosum
Phvul.001G148300 Phaseolus vulgaris
Phvul.007G169200 Phaseolus vulgaris
Potri.002G215800 Populus trichocarpa
Potri.014G138200 Populus trichocarpa
Prupe.8G245900 Prunus persica
Psat3g065760 Pisum sativum
Psat4g131480 Pisum sativum
Psat6g168840 Pisum sativum
PSO541G4889 Papaver somniferum
PSO675G9209 Papaver somniferum
PSO832G4321 Papaver somniferum
QL12p022856 Quercus lobata
RcHm_v2.0_Chr6g0291821 Rosa chinensis
RcHm_v2.0_Chr6g0291831 Rosa chinensis
Rhsim13G0022200 Rhododendron simsii
Sabra14G0104300 Salix brachista
SalBow6G4695 Salvia bowleyana
Sc05g0005080 Simmondsia chinensis
Sed0017907 Sechium edule
SEGI_15237 Sequoiadendron giganteum
SGA_v2.0_scaffold1G00444 Striga asiatica
Solyc09g072990.3 Solanum lycopersicum
Sopen09g028800 Solanum pennellii
Sp1g02330 Schrenkiella parvula
Sp6g02950 Schrenkiella parvula
TAR362G1031 Trochodendron aralioides
THA.LOC104801216 Tarenaya hassleriana
THA.LOC104815946 Tarenaya hassleriana
Thecc.01G284500 Theobroma cacao
Thhalv10007898m.g Eutrema salsugineum
Thhalv10028686m.g Eutrema salsugineum
TPR.G13395 Trifolium pratense
TPR.G32826 Trifolium pratense
TWI14G1274 Tripterygium wilfordii
unitig_22.g6690 Utricularia gibba
unitig_8.g3318 Utricularia gibba
vmacro02546 Vaccinium macrocarpon
VMungo0540G1158 Vigna mungo
VMungo0720G1290 Vigna mungo
VMungo1383G0556 Vigna mungo
Zm00001eb417790 Zea mays

User provided reference genes

Program Settings