Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p02670 Brassica napus
A10p23970 Brassica napus
Aa31LG11G14760 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3234 Anthoceros agrestis
Actinidia35748 Actinidia chinensis
AL6G25470 Arabidopsis lyrata
Aqoxy3G01042 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.NZB2J0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RRB9FM Arachis hypogaea
AT5G14700 Arabidopsis thaliana
ATR0730G190 Amborella trichopoda
ATR0730G229 Amborella trichopoda
Atru.chr6.2221 Acer truncatum
Atru.chr6.2222 Acer truncatum
Atru.chr6.2315 Acer truncatum
BcaB08g36955 Brassica carinata
BcaC03g13454 Brassica carinata
BcaC04g19018 Brassica carinata
BcaNung03103 Brassica carinata
BolC2t06655H Brassica oleracea
BolC9t59082H Brassica oleracea
BraA02t05236Z Brassica rapa
BraA10t44461Z Brassica rapa
C02p07230 Brassica napus
C09p62440 Brassica napus
CAN.G206.21 Capsicum annuum
CAN.G497.9 Capsicum annuum
CANSAT64G1226 Cannabis sativa
CARHR149370 Cardamine hirsuta
CARHR198610 Cardamine hirsuta
Carub.0005s0640 Capsella rubella
Carub.0006s1287 Capsella rubella
Ca_04186_v3 Cicer arietinum L.
Cc07_g02110 Coffea canephora
Cc07_g04970 Coffea canephora
CDE05G2282 Ceratophyllum demersum
Cfa007416 Carpinus fangiana
Cfa007417 Carpinus fangiana
Ciclev10015683m.g Citrus clementina
CiPaw.03G006100 Carya illinoinensis
CiPaw.03G039300 Carya illinoinensis
CiPaw.04G025700 Carya illinoinensis
ClCG09G019020 Citrullus lanatus
ClCG10G014160 Citrullus lanatus
COL.COLO4_04618 Corchorus olitorius
COL.COLO4_28992 Corchorus olitorius
Cpa.g.sc179.44 Carica papaya
CsaV3_3G042490 Cucumis sativus L.
CsaV3_5G027330 Cucumis sativus L.
CSS0003991 Camellia sinensis var. sinensis
CSS0020720 Camellia sinensis var. sinensis
DCAR_021691 Daucus carota
Dinv35077 Davidia involucrata
Duzib138G1144 Durio zibethinus
Duzib147G0579 Durio zibethinus
Duzib264G0889 Durio zibethinus
ECA246G2377 Erigeron canadensis
Eucgr.I01783 Eucalyptus grandis
FAN02G0995 Fragaria x ananassa
FAN05G1485 Fragaria x ananassa
FAN09G1817 Fragaria x ananassa
FAN14G4239 Fragaria x ananassa
FvH4_6g45521 Fragaria vesca
FvH4_6g50850 Fragaria vesca
Glyma.05G006600 Glycine max
Glyma.19G006900 Glycine max
Glyma.19G007200 Glycine max
Gohir.A05G358700 Gossypium hirsutum
Gohir.A07G073200 Gossypium hirsutum
Gohir.A09G026800 Gossypium hirsutum
Gohir.D04G055400 Gossypium hirsutum
Gohir.D07G077800 Gossypium hirsutum
Gohir.D09G026500 Gossypium hirsutum
Gorai.001G082300 Gossypium raimondii
Gorai.006G030500 Gossypium raimondii
Gorai.012G062200 Gossypium raimondii
GSVIVG01032458001 Vitis vinifera
GSVIVG01036464001 Vitis vinifera
HanXRQChr15g0475041 Helianthus annuus
HanXRQChr17g0548221 Helianthus annuus
Haze_14101 Corylus avellana
Haze_14685 Corylus avellana
Haze_14686 Corylus avellana
HPP92_008040 Vanilla planifolia
Lalb_Chr06g0175971 Lupinus albus
Lj2g0020545 Lotus japonicus
Lju41A36T59 Lonicera japonica
Lsat_1_v5_gn_0_38960 Lactuca sativa
Lsat_1_v5_gn_0_38980 Lactuca sativa
Manes.02G065400 Manihot esculenta
Manes.15G165400 Manihot esculenta
Manes.17G115900 Manihot esculenta
MBI10_g18316_MAGBIO Magnolia biondii
MBI16_g27098_MAGBIO Magnolia biondii
MD09G1031700 Malus domestica
MD09G1082100 Malus domestica
MD17G1033400 Malus domestica
Medtr6g406250 Medicago truncatula
MELO3C009963.2 Cucumis melo
MELO3C021550.2 Cucumis melo
Migut.H00107 Erythranthe guttata
MSTRG.24023 Avicennia marina
MSTRG.3165 Avicennia marina
Nitab4.5_0000372g0020 Nicotiana tabacum
Nitab4.5_0004420g0010 Nicotiana tabacum
Nitab4.5_0006281g0010 Nicotiana tabacum
Nitab4.5_0012445g0030 Nicotiana tabacum
Nn3g17650 Nelumbo nucifera
Oeu043046.1 Olea europaea
Oeu062927.1 Olea europaea
Os01g0639200 Oryza sativa ssp. japonica
Os05g0578500 Oryza sativa ssp. japonica
Peaxi162Scf00080g00036 Petunia axillaris
Peaxi162Scf00129g01233 Petunia axillaris
Peaxi162Scf01056g00247 Petunia axillaris
PGR142G4241 Punica granatum
PGSC0003DMG400000521 Solanum tuberosum
PGSC0003DMG400010092 Solanum tuberosum
Phvul.004G012500 Phaseolus vulgaris
Phvul.006G043200 Phaseolus vulgaris
Potri.001G349600 Populus trichocarpa
Potri.004G105000 Populus trichocarpa
Potri.017G110500 Populus trichocarpa
Prupe.3G241700 Prunus persica
Prupe.3G286200 Prunus persica
Psat1g057640 Pisum sativum
PSO017G4391 Papaver somniferum
PSO478G1365 Papaver somniferum
QL02p053422 Quercus lobata
QL02p076006 Quercus lobata
RcHm_v2.0_Chr2g0163471 Rosa chinensis
RcHm_v2.0_Chr2g0172231 Rosa chinensis
Rhsim08G0053700 Rhododendron simsii
Sabra16G0229000 Salix brachista
Sabra17G0092400 Salix brachista
SalBow1G1571 Salvia bowleyana
Sc03g0007990 Simmondsia chinensis
Sed0000494 Sechium edule
Sed0022000 Sechium edule
SEGI_32180 Sequoiadendron giganteum
SEGI_37169 Sequoiadendron giganteum
SGA_v2.0_scaffold135G34884 Striga asiatica
SGA_v2.0_scaffold205G41684 Striga asiatica
Solyc02g086770.3 Solanum lycopersicum
Sopen02g031530 Solanum pennellii
Sopen02g031540 Solanum pennellii
Sopen02g034470 Solanum pennellii
Sp2g16910 Schrenkiella parvula
Sp6g29340 Schrenkiella parvula
TAR371G0652 Trochodendron aralioides
TAR371G0851 Trochodendron aralioides
TAR374G0957 Trochodendron aralioides
THA.LOC104821079 Tarenaya hassleriana
THA.LOC104825332 Tarenaya hassleriana
Thecc.04G011200 Theobroma cacao
Thecc.04G144000 Theobroma cacao
Thhalv10005604m.g Eutrema salsugineum
Thhalv10013866m.g Eutrema salsugineum
TPR.G35383 Trifolium pratense
TWI12G0349 Tripterygium wilfordii
vmacro18256 Vaccinium macrocarpon
VMungo0464G2128 Vigna mungo
Zm00001eb158860 Zea mays
Zm00001eb344520 Zea mays
Zm00001eb359110 Zea mays

User provided reference genes

Program Settings