Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p18390 Brassica napus
A09p55400 Brassica napus
Aa31LG4G3260 Aethionema arabicum
Aa31LG5G9710 Aethionema arabicum
Actinidia14710 Actinidia chinensis
Actinidia18191 Actinidia chinensis
Ah.01g004520 Amaranthus hybridus
Ah.10g034440 Amaranthus hybridus
AL2G32750 Arabidopsis lyrata
AL4G18180 Arabidopsis lyrata
AT1G73000 Arabidopsis thaliana
AT2G26040 Arabidopsis thaliana
ATR0705G011 Amborella trichopoda
Atru.chr1.3666 Acer truncatum
Atru.chr7.1045 Acer truncatum
AUR62009160 Chenopodium quinoa
AUR62022062 Chenopodium quinoa
AUR62023922 Chenopodium quinoa
AUR62038318 Chenopodium quinoa
AUR62044383 Chenopodium quinoa
BcaB05g24792 Brassica carinata
BcaB08g35237 Brassica carinata
BcaC03g15436 Brassica carinata
BcaC07g40839 Brassica carinata
BolC2t09096H Brassica oleracea
BolC8t51410H Brassica oleracea
BraA02t06878Z Brassica rapa
BraA09t40942Z Brassica rapa
C02p30460 Brassica napus
C08p38370 Brassica napus
CAN.G208.77 Capsicum annuum
CANSAT25G1490 Cannabis sativa
CARHR065970 Cardamine hirsuta
CARHR114750 Cardamine hirsuta
Carub.0002s1976 Capsella rubella
Carub.0004s0586 Capsella rubella
Cc08_g10450 Coffea canephora
Cfa017946 Carpinus fangiana
Ciclev10010262m.g Citrus clementina
Ciclev10027552m.g Citrus clementina
CiPaw.15G039800 Carya illinoinensis
ClCG05G017790 Citrullus lanatus
COL.COLO4_21046 Corchorus olitorius
COL.COLO4_30638 Corchorus olitorius
CsaV3_4G035560 Cucumis sativus L.
CSS0033624 Camellia sinensis var. sinensis
DCAR_004432 Daucus carota
Dinv27978 Davidia involucrata
Duzib150G1182 Durio zibethinus
Duzib168G0920 Durio zibethinus
Duzib187G0308 Durio zibethinus
Duzib235G0278 Durio zibethinus
Duzib235G0457 Durio zibethinus
ECA240G0779 Erigeron canadensis
EL10Ac2g03898 Beta vulgaris
EL10Ac9g21096 Beta vulgaris
Eucgr.C03025 Eucalyptus grandis
Eucgr.J02878 Eucalyptus grandis
Eucgr.J02879 Eucalyptus grandis
FAN15G1000 Fragaria x ananassa
FAN20G1558 Fragaria x ananassa
FAN24G2095 Fragaria x ananassa
FAN27G2699 Fragaria x ananassa
FvH4_2g32040 Fragaria vesca
Glyma.04G050900 Glycine max
Glyma.06G051800 Glycine max
Glyma.14G093700 Glycine max
Glyma.17G229900 Glycine max
Gohir.A05G042900 Gossypium hirsutum
Gohir.A07G022112 Gossypium hirsutum
Gohir.A08G248500 Gossypium hirsutum
Gohir.A10G076232 Gossypium hirsutum
Gohir.D05G044600 Gossypium hirsutum
Gohir.D07G022400 Gossypium hirsutum
Gohir.D08G269500 Gossypium hirsutum
Gohir.D10G075300 Gossypium hirsutum
Gorai.001G023000 Gossypium raimondii
Gorai.004G287300 Gossypium raimondii
Gorai.009G045700 Gossypium raimondii
Gorai.011G081100 Gossypium raimondii
GSVIVG01035362001 Vitis vinifera
HanXRQChr03g0079061 Helianthus annuus
HanXRQChr07g0189721 Helianthus annuus
HanXRQChr08g0226571 Helianthus annuus
HanXRQChr13g0410721 Helianthus annuus
Haze_18200 Corylus avellana
Haze_18211 Corylus avellana
Hma1.2p1_0482F.1_g162590 Hydrangea macrophylla
Hma1.2p1_0482F.1_g162595 Hydrangea macrophylla
HPP92_003947 Vanilla planifolia
Lalb_Chr24g0399641 Lupinus albus
Lj5g0006362 Lotus japonicus
Lj7P277T7 Lonicera japonica
Lj8P544T2 Lonicera japonica
Lj8P549T2 Lonicera japonica
Lsat_1_v5_gn_5_48780 Lactuca sativa
Lsat_1_v5_gn_6_13301 Lactuca sativa
Manes.03G047500 Manihot esculenta
Manes.16G079500 Manihot esculenta
MBI01_g02260_MAGBIO Magnolia biondii
MD08G1043500 Malus domestica
MD15G1060800 Malus domestica
Medtr1g016480 Medicago truncatula
MELO3C016864.2 Cucumis melo
Migut.A00141 Erythranthe guttata
Migut.I01009 Erythranthe guttata
MSTRG.11663 Avicennia marina
MSTRG.25945 Avicennia marina
Nitab4.5_0000738g0110 Nicotiana tabacum
Nitab4.5_0001584g0090 Nicotiana tabacum
Nitab4.5_0004160g0010 Nicotiana tabacum
Nitab4.5_0004419g0010 Nicotiana tabacum
Nn6g35430 Nelumbo nucifera
Nn8g38908 Nelumbo nucifera
Oeu023581.1 Olea europaea
Oeu036341.2 Olea europaea
Oeu039977.1 Olea europaea
Oeu047116.1 Olea europaea
Os02g0226801 Oryza sativa ssp. japonica
Os06g0562200 Oryza sativa ssp. japonica
Peaxi162Scf00136g00113 Petunia axillaris
PGR044G2229 Punica granatum
PGR102G2434 Punica granatum
PGSC0003DMG400029300 Solanum tuberosum
PGSC0003DMG400029952 Solanum tuberosum
Phvul.001G034300 Phaseolus vulgaris
Phvul.009G077200 Phaseolus vulgaris
Potri.006G230600 Populus trichocarpa
Potri.018G054400 Populus trichocarpa
Pp3c15_19950 Physcomitrium patens
Prupe.1G413500 Prunus persica
Psat6g020920 Pisum sativum
PSO210G1275 Papaver somniferum
PSO210G5778 Papaver somniferum
QL02p001354 Quercus lobata
QL05p015079 Quercus lobata
RcHm_v2.0_Chr6g0310701 Rosa chinensis
Rhsim07G0142700 Rhododendron simsii
Sabra06G0178800 Salix brachista
SalBow4G0326 Salvia bowleyana
Sc09g0009750 Simmondsia chinensis
Sed0016841 Sechium edule
SGA_v2.0_scaffold88G27223 Striga asiatica
Solyc08g065410.3 Solanum lycopersicum
Solyc12g095970.3 Solanum lycopersicum
Sopen08g018950 Solanum pennellii
Sopen12g031860 Solanum pennellii
Sp4g05890 Schrenkiella parvula
Sp5g27960 Schrenkiella parvula
TAR383G0220 Trochodendron aralioides
THA.LOC104803731 Tarenaya hassleriana
THA.LOC104804516 Tarenaya hassleriana
Thecc.06G110500 Theobroma cacao
Thecc.09G052800 Theobroma cacao
Thhalv10002167m.g Eutrema salsugineum
Thhalv10019704m.g Eutrema salsugineum
TPR.G13140 Trifolium pratense
TWI32G1244 Tripterygium wilfordii
TWI34G0877 Tripterygium wilfordii
TWI63G0872 Tripterygium wilfordii
unitig_578.g16572 Utricularia gibba
unitig_748.g7523 Utricularia gibba
vmacro14253 Vaccinium macrocarpon
VMungo0647G1879 Vigna mungo
VMungo1309G3102 Vigna mungo
Zm00001eb239670 Zea mays

User provided reference genes

Program Settings