Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p25540 Brassica napus
Aa31LG10G15460 Aethionema arabicum
Aa31LG1G27520 Aethionema arabicum
Actinidia20162 Actinidia chinensis
Ah.15g096610 Amaranthus hybridus
AL5G43880 Arabidopsis lyrata
Aqoxy4G00899 Aquilegia oxysepala
Aqoxy7G01324 Aquilegia oxysepala
Aqoxy7G01955 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.K45FBX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U9H0N8 Arachis hypogaea
AT3G61520 Arabidopsis thaliana
AT5G28370 Arabidopsis thaliana
AT5G28460 Arabidopsis thaliana
ATR0721G158 Amborella trichopoda
Atru.chr5.563 Acer truncatum
Atru.chr5.581 Acer truncatum
AUR62004412 Chenopodium quinoa
AUR62022618 Chenopodium quinoa
BcaB02g07375 Brassica carinata
BcaC08g45129 Brassica carinata
BolC6t37920H Brassica oleracea
BraA07t30195Z Brassica rapa
C06p27530 Brassica napus
CAN.G1005.1 Capsicum annuum
CAN.G1005.2 Capsicum annuum
CAN.G1129.41 Capsicum annuum
CAN.G1417.4 Capsicum annuum
CAN.G430.2 Capsicum annuum
CAN.G460.4 Capsicum annuum
CAN.G609.3 Capsicum annuum
CAN.G78.130 Capsicum annuum
CAN.G853.45 Capsicum annuum
CAN.G874.71 Capsicum annuum
CANSAT56G3111 Cannabis sativa
CARHR141380 Cardamine hirsuta
CARHR141390 Cardamine hirsuta
CARHR171850 Cardamine hirsuta
Carub.0005s2821 Capsella rubella
Ca_17228_v3 Cicer arietinum L.
Cc02_g38560 Coffea canephora
Cfa003873 Carpinus fangiana
Ciclev10019067m.g Citrus clementina
CiPaw.01G066500 Carya illinoinensis
CiPaw.01G066600 Carya illinoinensis
CiPaw.01G066700 Carya illinoinensis
CiPaw.01G066800 Carya illinoinensis
CiPaw.01G067100 Carya illinoinensis
CiPaw.01G067200 Carya illinoinensis
CiPaw.01G067300 Carya illinoinensis
CiPaw.01G067400 Carya illinoinensis
CiPaw.01G067500 Carya illinoinensis
CiPaw.12G038600 Carya illinoinensis
ClCG09G009150 Citrullus lanatus
COL.COLO4_12777 Corchorus olitorius
CsaV3_7G025780 Cucumis sativus L.
CSS0000093 Camellia sinensis var. sinensis
CSS0016355 Camellia sinensis var. sinensis
DCAR_025213 Daucus carota
Dinv32521 Davidia involucrata
Dinv43863 Davidia involucrata
Duzib133G1046 Durio zibethinus
Duzib138G1643 Durio zibethinus
ECA236G1505 Erigeron canadensis
EL10Ac1g00355 Beta vulgaris
Eucgr.E00097 Eucalyptus grandis
FAN01G0431 Fragaria x ananassa
FAN03G2211 Fragaria x ananassa
FAN04G0755 Fragaria x ananassa
FAN06G0440 Fragaria x ananassa
FAN06G2614 Fragaria x ananassa
FAN06G4981 Fragaria x ananassa
FAN08G3007 Fragaria x ananassa
FAN10G1060 Fragaria x ananassa
FAN10G3614 Fragaria x ananassa
FAN18G1403 Fragaria x ananassa
FAN18G4460 Fragaria x ananassa
FvH4_5g03011 Fragaria vesca
FvH4_5g32150 Fragaria vesca
FvH4_7g15360 Fragaria vesca
Glyma.16G031800 Glycine max
Gohir.A12G106900 Gossypium hirsutum
Gohir.D08G154250 Gossypium hirsutum
Gohir.D12G110200 Gossypium hirsutum
Gorai.008G119500 Gossypium raimondii
GSVIVG01026966001 Vitis vinifera
HanXRQChr04g0120801 Helianthus annuus
HanXRQChr05g0140981 Helianthus annuus
Haze_15564 Corylus avellana
HPP92_011504 Vanilla planifolia
Lalb_Chr04g0259301 Lupinus albus
Lj4g0005982 Lotus japonicus
Lj7C507T1 Lonicera japonica
Lsat_1_v5_gn_7_2720 Lactuca sativa
Manes.01G252300 Manihot esculenta
Manes.05G029400 Manihot esculenta
MBI11_g19575_MAGBIO Magnolia biondii
MBI11_g19576_MAGBIO Magnolia biondii
MD01G1071400 Malus domestica
MD07G1131300 Malus domestica
Medtr3g088810 Medicago truncatula
Medtr8g098755 Medicago truncatula
MELO3C029134.2 Cucumis melo
Migut.B01798 Erythranthe guttata
Nitab4.5_0000915g0110 Nicotiana tabacum
Nitab4.5_0010695g0010 Nicotiana tabacum
Nn1g01685 Nelumbo nucifera
Oeu015216.1 Olea europaea
Os06g0249500 Oryza sativa ssp. japonica
Peaxi162Scf00020g00155 Petunia axillaris
PGR142G0969 Punica granatum
PGSC0003DMG400000195 Solanum tuberosum
Phvul.002G326200 Phaseolus vulgaris
Potri.014G090400 Populus trichocarpa
Prupe.2G177500 Prunus persica
Psat7g005640 Pisum sativum
PSO266G0010 Papaver somniferum
PSO384G0446 Papaver somniferum
QL04p055515 Quercus lobata
RcHm_v2.0_Chr1g0357681 Rosa chinensis
RcHm_v2.0_Chr3g0468501 Rosa chinensis
RcHm_v2.0_Chr5g0017031 Rosa chinensis
RcHm_v2.0_Chr7g0228211 Rosa chinensis
RcHm_v2.0_Chr7g0228281 Rosa chinensis
RcHm_v2.0_Chr7g0228291 Rosa chinensis
Rhsim07G0010500 Rhododendron simsii
Sabra14G0065500 Salix brachista
SalBow3G3666 Salvia bowleyana
Sc01g0003220 Simmondsia chinensis
Sed0017189 Sechium edule
SEGI_03438 Sequoiadendron giganteum
SEGI_05660 Sequoiadendron giganteum
SEGI_06168 Sequoiadendron giganteum
SEGI_07366 Sequoiadendron giganteum
SEGI_07919 Sequoiadendron giganteum
SEGI_08205 Sequoiadendron giganteum
SEGI_10842 Sequoiadendron giganteum
SEGI_11799 Sequoiadendron giganteum
SEGI_14951 Sequoiadendron giganteum
SEGI_18390 Sequoiadendron giganteum
SEGI_22559 Sequoiadendron giganteum
SEGI_23216 Sequoiadendron giganteum
SEGI_27590 Sequoiadendron giganteum
SEGI_34583 Sequoiadendron giganteum
SEGI_36720 Sequoiadendron giganteum
SEGI_36939 Sequoiadendron giganteum
SEGI_36951 Sequoiadendron giganteum
SGA_v2.0_scaffold4G02283 Striga asiatica
SMO364G0646 Selaginella moellendorffii
Solyc01g095110.4 Solanum lycopersicum
Sopen01g038900 Solanum pennellii
Sp4g28170 Schrenkiella parvula
TAR629G0263 Trochodendron aralioides
THA.LOC104817316 Tarenaya hassleriana
Thecc.01G352500 Theobroma cacao
Thhalv10001319m.g Eutrema salsugineum
Thhalv10022571m.g Eutrema salsugineum
TPR.G2949 Trifolium pratense
TWI23G0979 Tripterygium wilfordii
vmacro13229 Vaccinium macrocarpon
VMungo0251G0997 Vigna mungo
VMungo0251G1173 Vigna mungo
VMungo0540G1210 Vigna mungo
VMungo1127G1354 Vigna mungo
VMungo1309G0982 Vigna mungo
Zm00001eb280170 Zea mays

User provided reference genes

Program Settings