Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p23720 Brassica napus
A03p48070 Brassica napus
A09p44080 Brassica napus
Aa31LG1G14930 Aethionema arabicum
Actinidia38434 Actinidia chinensis
Ah.12g058700 Amaranthus hybridus
AL5G31360 Arabidopsis lyrata
AL8G45120 Arabidopsis lyrata
Aqoxy2G02553 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2UYT9T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.544LAE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5QW7B0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W01EMI Arachis hypogaea
AT3G50960 Arabidopsis thaliana
AT5G66410 Arabidopsis thaliana
ATR0564G141 Amborella trichopoda
Atru.chr3.661 Acer truncatum
Atru.chr3.706 Acer truncatum
AUR62018531 Chenopodium quinoa
AUR62020886 Chenopodium quinoa
AUR62020887 Chenopodium quinoa
BcaB01g00558 Brassica carinata
BcaC07g39566 Brassica carinata
BcaC07g39569 Brassica carinata
BcaC07g39571 Brassica carinata
BcaC09g50060 Brassica carinata
BcaNung00405 Brassica carinata
BolC1t02889H Brassica oleracea
BolC7t45125H Brassica oleracea
BolC8t50240H Brassica oleracea
BraA01t02282Z Brassica rapa
BraA03t13914Z Brassica rapa
BraA09t39866Z Brassica rapa
C01p29480 Brassica napus
C07p46090 Brassica napus
C08p26220 Brassica napus
CAN.G1373.27 Capsicum annuum
CANSAT01G0885 Cannabis sativa
CANSAT01G1521 Cannabis sativa
CARHR034760 Cardamine hirsuta
CARHR160540 Cardamine hirsuta
Carub.0005s1736 Capsella rubella
Carub.0008s2810 Capsella rubella
Ca_22334_v3 Cicer arietinum L.
Ca_22338_v3 Cicer arietinum L.
Ca_22453_v3 Cicer arietinum L.
CBR_g943 Chara braunii
Cc07_g09970 Coffea canephora
CDE10G0804 Ceratophyllum demersum
CDE10G0985 Ceratophyllum demersum
Cfa021838 Carpinus fangiana
Cfa024648 Carpinus fangiana
Ciclev10027615m.g Citrus clementina
CiPaw.07G050300 Carya illinoinensis
CiPaw.07G051300 Carya illinoinensis
ClCG01G019890 Citrullus lanatus
ClCG08G005880 Citrullus lanatus
Cpa.g.sc6.171 Carica papaya
Cre17.g717750 Chlamydomonas reinhardtii
CsaV3_6G034240 Cucumis sativus L.
CSS0033828 Camellia sinensis var. sinensis
CSS0036707 Camellia sinensis var. sinensis
CSS0037031 Camellia sinensis var. sinensis
DCAR_018301 Daucus carota
Dinv05626 Davidia involucrata
Dinv42846 Davidia involucrata
Dinv43254 Davidia involucrata
Duzib187G0459 Durio zibethinus
Duzib264G0515 Durio zibethinus
ECA232G0973 Erigeron canadensis
EL10Ac4g09698 Beta vulgaris
Eucgr.I02400 Eucalyptus grandis
FAN04G1187 Fragaria x ananassa
FAN08G2684 Fragaria x ananassa
FAN18G2776 Fragaria x ananassa
FAN19G2717 Fragaria x ananassa
FAN23G1746 Fragaria x ananassa
FAN26G1165 Fragaria x ananassa
FAN28G2878 Fragaria x ananassa
FvH4_1g12650 Fragaria vesca
FvH4_5g33310 Fragaria vesca
Glyma.02G053300 Glycine max
Glyma.14G219400 Glycine max
Gohir.A11G182100 Gossypium hirsutum
Gohir.D11G188800 Gossypium hirsutum
Gohir.D11G188940 Gossypium hirsutum
Gorai.007G200900 Gossypium raimondii
GSVIVG01018889001 Vitis vinifera
GSVIVG01023465001 Vitis vinifera
HanXRQChr09g0261201 Helianthus annuus
HanXRQChr11g0325541 Helianthus annuus
HanXRQChr11g0338941 Helianthus annuus
Haze_05175 Corylus avellana
Haze_13703 Corylus avellana
Hma1.2p1_1297F.1_g274030 Hydrangea macrophylla
Hund07197 Selenicereus undatus
Lalb_Chr05g0225171 Lupinus albus
Lj2C458T3 Lonicera japonica
Lj2g0004786 Lotus japonicus
Lsat_1_v5_gn_5_168741 Lactuca sativa
Lsat_1_v5_gn_9_109101 Lactuca sativa
Manes.01G139600 Manihot esculenta
Manes.02G097501 Manihot esculenta
Mapoly0077s0014 Marchantia polymorpha
MBI02_g37834_MAGBIO Magnolia biondii
MBI12_g21442_MAGBIO Magnolia biondii
MBI15_g04257_MAGBIO Magnolia biondii
MBI16_g19187_MAGBIO Magnolia biondii
MBI17_g30593_MAGBIO Magnolia biondii
MCO09G765 Micromonas commoda
MD02G1141000 Malus domestica
MD15G1253500 Malus domestica
Medtr8g076890 Medicago truncatula
MELO3C010633.2 Cucumis melo
Migut.H02517 Erythranthe guttata
MSTRG.23256 Avicennia marina
Nitab4.5_0000136g0180 Nicotiana tabacum
Nitab4.5_0005274g0010 Nicotiana tabacum
Nitab4.5_0009648g0030 Nicotiana tabacum
Nn5g28996 Nelumbo nucifera
Oeu016116.1 Olea europaea
Os05g0255600 Oryza sativa ssp. japonica
Os11g0604700 Oryza sativa ssp. japonica
Peaxi162Scf00008g03317 Petunia axillaris
PGR119G1800 Punica granatum
PGSC0003DMG400015493 Solanum tuberosum
Phvul.003G256900 Phaseolus vulgaris
Potri.007G020400 Populus trichocarpa
Pp3c17_20760 Physcomitrium patens
PRCOL_00002644 Prasinoderma coloniale
Prupe.5G010500 Prunus persica
Prupe.6G150600 Prunus persica
Psat4g095920 Pisum sativum
PSO339G3999 Papaver somniferum
PSO384G3579 Papaver somniferum
QL06p035291 Quercus lobata
RcHm_v2.0_Chr2g0100611 Rosa chinensis
Sabra07G0017500 Salix brachista
SalBow1G5811 Salvia bowleyana
SalBow8G4592 Salvia bowleyana
Sc16g0009770 Simmondsia chinensis
Sed0002815 Sechium edule
SGA_v2.0_scaffold12G06330 Striga asiatica
SGA_v2.0_scaffold51G18807 Striga asiatica
SHI08635 Sapria himalayana
SMO164G0166 Selaginella moellendorffii
Solyc02g062540.3 Solanum lycopersicum
Sopen02g013550 Solanum pennellii
Sp5g11240 Schrenkiella parvula
TAR381G0355 Trochodendron aralioides
TAR625G1168 Trochodendron aralioides
THA.LOC104800774 Tarenaya hassleriana
THA.LOC104821302 Tarenaya hassleriana
Thecc.01G028600 Theobroma cacao
Thhalv10010762m.g Eutrema salsugineum
TPR.G21543 Trifolium pratense
TWI73G0506 Tripterygium wilfordii
unitig_52.g17472 Utricularia gibba
vmacro04739 Vaccinium macrocarpon
VMungo0251G3718 Vigna mungo
Zm00001eb028150 Zea mays
Zm00001eb145060 Zea mays
Zm00001eb167250 Zea mays
Zm00001eb382800 Zea mays
Zm00001eb411660 Zea mays
Zm00001eb426440 Zea mays

User provided reference genes

Program Settings