Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p08010 Brassica napus
A07p01640 Brassica napus
Aa31LG2G20440 Aethionema arabicum
Aa31LG8G16150 Aethionema arabicum
Actinidia28216 Actinidia chinensis
Actinidia29958 Actinidia chinensis
Actinidia29959 Actinidia chinensis
Actinidia38502 Actinidia chinensis
Ah.09g230180 Amaranthus hybridus
Ah.14g083660 Amaranthus hybridus
AL3G52830 Arabidopsis lyrata
AL7G22070 Arabidopsis lyrata
Aqoxy7G02736 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4E3UXJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.94TNN4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QRCU7C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U5BQ4B Arachis hypogaea
AT2G19090 Arabidopsis thaliana
AT4G30130 Arabidopsis thaliana
ATR0626G137 Amborella trichopoda
Atru.chr7.818 Acer truncatum
AUR62021330 Chenopodium quinoa
AUR62033245 Chenopodium quinoa
BcaB03g12632 Brassica carinata
BcaB03g16802 Brassica carinata
BcaC04g22868 Brassica carinata
BcaC06g36519 Brassica carinata
BcaC09g51792 Brassica carinata
BcaNung04413 Brassica carinata
BolC1t00887H Brassica oleracea
BolC7t40739H Brassica oleracea
BolC9t54348H Brassica oleracea
BraA01t00746Z Brassica rapa
BraA07t27966Z Brassica rapa
BraA09t36866Z Brassica rapa
C01p08970 Brassica napus
C07p03400 Brassica napus
C09p14450 Brassica napus
CAN.G854.13 Capsicum annuum
CANSAT11G0766 Cannabis sativa
CARHR109610 Cardamine hirsuta
CARHR238030 Cardamine hirsuta
Carub.0003s3333 Capsella rubella
Carub.0007s1048 Capsella rubella
Ca_02043_v3 Cicer arietinum L.
Ca_02047_v3 Cicer arietinum L.
Ca_21246_v3 Cicer arietinum L.
Cc06_g21650 Coffea canephora
CDE05G1192 Ceratophyllum demersum
Cfa013432 Carpinus fangiana
Ciclev10007457m.g Citrus clementina
CiPaw.07G195200 Carya illinoinensis
CiPaw.08G033700 Carya illinoinensis
CiPaw.13G139000 Carya illinoinensis
ClCG11G011920 Citrullus lanatus
COL.COLO4_29314 Corchorus olitorius
Cpa.g.sc95.27 Carica papaya
Cpa.g.sc95.28 Carica papaya
CsaV3_2G008590 Cucumis sativus L.
CSS0030263 Camellia sinensis var. sinensis
DCAR_019822 Daucus carota
Dinv25413 Davidia involucrata
Dinv25416 Davidia involucrata
Dinv26441 Davidia involucrata
Dinv26442 Davidia involucrata
Duzib150G0836 Durio zibethinus
ECA234G2540 Erigeron canadensis
ECA240G1670 Erigeron canadensis
EL10Ac8g18316 Beta vulgaris
Eucgr.C02248 Eucalyptus grandis
FAN12G0029 Fragaria x ananassa
FAN17G2277 Fragaria x ananassa
FAN22G0745 Fragaria x ananassa
FvH4_4g07580 Fragaria vesca
Glyma.09G058000 Glycine max
Glyma.13G099500 Glycine max
Glyma.15G164100 Glycine max
Glyma.17G060600 Glycine max
Gohir.A13G212500 Gossypium hirsutum
Gohir.D13G216600 Gossypium hirsutum
Gorai.013G246900 Gossypium raimondii
GSVIVG01010901001 Vitis vinifera
HanXRQChr10g0309241 Helianthus annuus
Haze_21986 Corylus avellana
Haze_21989 Corylus avellana
HPP92_003060 Vanilla planifolia
HPP92_019928 Vanilla planifolia
HPP92_019930 Vanilla planifolia
Hund26320 Selenicereus undatus
Lalb_Chr07g0180601 Lupinus albus
Lalb_Chr18g0052521 Lupinus albus
Lalb_Chr20g0116291 Lupinus albus
Lj4g0015498 Lotus japonicus
Lj5A679T31 Lonicera japonica
Lj6g0013002 Lotus japonicus
Lsat_1_v5_gn_5_82221 Lactuca sativa
Manes.14G158839 Manihot esculenta
MBI13_g31545_MAGBIO Magnolia biondii
MBI16_g18214_MAGBIO Magnolia biondii
MD00G1185400 Malus domestica
MD13G1245700 Malus domestica
MD13G1245800 Malus domestica
Medtr2g036920 Medicago truncatula
Medtr4g127620 Medicago truncatula
MELO3C003998.2 Cucumis melo
Migut.L01895 Erythranthe guttata
MSTRG.10451 Avicennia marina
Nitab4.5_0000441g0050 Nicotiana tabacum
Nitab4.5_0009877g0040 Nicotiana tabacum
Nn2g12746 Nelumbo nucifera
Nn8g40976 Nelumbo nucifera
Oeu057494.1 Olea europaea
Oeu057498.1 Olea europaea
Oeu059122.1 Olea europaea
Os08g0519700 Oryza sativa ssp. japonica
Os08g0519750 Oryza sativa ssp. japonica
Peaxi162Scf00776g00228 Petunia axillaris
PGR044G2442 Punica granatum
PGSC0003DMG400006129 Solanum tuberosum
Phvul.003G142800 Phaseolus vulgaris
Phvul.009G237700 Phaseolus vulgaris
Potri.006G077000 Populus trichocarpa
Potri.018G147749 Populus trichocarpa
Prupe.1G079100 Prunus persica
Psat0ss2585g0040 Pisum sativum
Psat1g145880 Pisum sativum
PSO079G0004 Papaver somniferum
PSO423G0107 Papaver somniferum
QL11p004794 Quercus lobata
RcHm_v2.0_Chr4g0400181 Rosa chinensis
Rhsim01G0120300 Rhododendron simsii
Sabra06G0058300 Salix brachista
SalBow5G1589 Salvia bowleyana
Sc14g0001360 Simmondsia chinensis
Sed0006240 Sechium edule
SEGI_40428 Sequoiadendron giganteum
SGA_v2.0_scaffold41G15860 Striga asiatica
Solyc07g047830.3 Solanum lycopersicum
Sopen07g024270 Solanum pennellii
Sp3g32490 Schrenkiella parvula
Sp7g27980 Schrenkiella parvula
TAR506G0001 Trochodendron aralioides
TAR506G0004 Trochodendron aralioides
TAR625G0610 Trochodendron aralioides
THA.LOC104814668 Tarenaya hassleriana
THA.LOC104819969 Tarenaya hassleriana
Thecc.09G181300 Theobroma cacao
Thhalv10022561m.g Eutrema salsugineum
Thhalv10024537m.g Eutrema salsugineum
TPR.G5365 Trifolium pratense
TPR.G5402 Trifolium pratense
TPR.G9019 Trifolium pratense
TWI63G1758 Tripterygium wilfordii
unitig_578.g16067 Utricularia gibba
unitig_578.g16068 Utricularia gibba
unitig_746.g26790 Utricularia gibba
unitig_8.g4936 Utricularia gibba
vmacro20834 Vaccinium macrocarpon
VMungo1215G2438 Vigna mungo
VMungo1309G0449 Vigna mungo
Zm00001eb035710 Zea mays
Zm00001eb174640 Zea mays
Zm00001eb215730 Zea mays
Zm00001eb368760 Zea mays
Zm00001eb388850 Zea mays
Zm00001eb388890 Zea mays

User provided reference genes

Program Settings