Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p30020 Brassica napus
Aa31sc52G180 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4227 Anthoceros agrestis
Actinidia06045 Actinidia chinensis
Actinidia37744 Actinidia chinensis
Ah.01g014630 Amaranthus hybridus
AL4G19610 Arabidopsis lyrata
AL6G16420 Arabidopsis lyrata
AL6G16430 Arabidopsis lyrata
AL6G38940 Arabidopsis lyrata
Aqoxy3G00875 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2W33L2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZDQ0NF Arachis hypogaea
AT4G04680 Arabidopsis thaliana
AT5G06350 Arabidopsis thaliana
AT5G27010 Arabidopsis thaliana
ATR0684G083 Amborella trichopoda
ATR0684G087 Amborella trichopoda
Atru.chr8.1370 Acer truncatum
Atru.chr9.697 Acer truncatum
AUR62030747 Chenopodium quinoa
AUR62036385 Chenopodium quinoa
BcaB02g11156 Brassica carinata
BcaB02g11160 Brassica carinata
BcaC06g32369 Brassica carinata
BcaC07g36816 Brassica carinata
BcaNung06319 Brassica carinata
BolC5t32083H Brassica oleracea
BolC9t59789H Brassica oleracea
BraA10t45042Z Brassica rapa
C05p33550 Brassica napus
C09p70430 Brassica napus
CAN.G574.19 Capsicum annuum
CANSAT01G1742 Cannabis sativa
CARHR207090 Cardamine hirsuta
Carub.0006s0524 Capsella rubella
Ca_09055_v3 Cicer arietinum L.
Ca_26380_v3 Cicer arietinum L.
Ca_30860_v3 Cicer arietinum L.
Cc06_g06530 Coffea canephora
Cc06_g06540 Coffea canephora
CDE05G1117 Ceratophyllum demersum
Cfa016679 Carpinus fangiana
Cfa020026 Carpinus fangiana
Cfa026921 Carpinus fangiana
Ciclev10011038m.g Citrus clementina
CiPaw.10G017100 Carya illinoinensis
ClCG10G016230 Citrullus lanatus
COL.COLO4_29580 Corchorus olitorius
Cpa.g.c47797 Carica papaya
Cpa.g.sc104.34 Carica papaya
Cpa.g.sc104.35 Carica papaya
Cre10.g442250 Chlamydomonas reinhardtii
CsaV3_3G040150 Cucumis sativus L.
CSS0019025 Camellia sinensis var. sinensis
DCAR_020706 Daucus carota
Dinv05301 Davidia involucrata
Dinv31757 Davidia involucrata
Duzib093G0037 Durio zibethinus
ECA247G2914 Erigeron canadensis
EL10Ac5g12964 Beta vulgaris
Eucgr.E01507 Eucalyptus grandis
FAN02G0498 Fragaria x ananassa
FAN05G1094 Fragaria x ananassa
FAN05G4951 Fragaria x ananassa
FAN09G3200 Fragaria x ananassa
FAN14G1070 Fragaria x ananassa
FvH4_6g20280 Fragaria vesca
Glyma.07G150100 Glycine max
Glyma.16G096800 Glycine max
Glyma.16G099100 Glycine max
Gohir.A09G134400 Gossypium hirsutum
Gohir.D09G130900 Gossypium hirsutum
Gorai.006G149600 Gossypium raimondii
GSVIVG01033953001 Vitis vinifera
GSVIVG01033954001 Vitis vinifera
HanXRQChr01g0006711 Helianthus annuus
HanXRQChr06g0164371 Helianthus annuus
HanXRQChr06g0164401 Helianthus annuus
HanXRQChr06g0164411 Helianthus annuus
HanXRQChr17g0549301 Helianthus annuus
Haze_19699 Corylus avellana
Haze_20188 Corylus avellana
Hma1.2p1_0079F.1_g041850 Hydrangea macrophylla
HPP92_005875 Vanilla planifolia
Hund14947 Selenicereus undatus
Lalb_Chr20g0111391 Lupinus albus
Lj1A1051T46 Lonicera japonica
Lj1A1051T47 Lonicera japonica
Lj1g0019866 Lotus japonicus
Lsat_1_v5_gn_3_1160 Lactuca sativa
Manes.09G044700 Manihot esculenta
Manes.09G045100 Manihot esculenta
Mapoly0023s0084 Marchantia polymorpha
MBI13_g30331_MAGBIO Magnolia biondii
MCO15G695 Micromonas commoda
MD10G1053900 Malus domestica
MD12G1040000 Malus domestica
Medtr5g027350 Medicago truncatula
Medtr7g106190 Medicago truncatula
MELO3C009754.2 Cucumis melo
Migut.J00705 Erythranthe guttata
MSTRG.5896 Avicennia marina
Nitab4.5_0000020g0020 Nicotiana tabacum
Nitab4.5_0000020g0030 Nicotiana tabacum
Nitab4.5_0000020g0040 Nicotiana tabacum
Nitab4.5_0002858g0080 Nicotiana tabacum
Nitab4.5_0002858g0090 Nicotiana tabacum
Nn4g22932 Nelumbo nucifera
Oeu036625.1 Olea europaea
Oeu036626.1 Olea europaea
Oeu052620.1 Olea europaea
Os04g0466700 Oryza sativa ssp. japonica
Peaxi162Scf00586g00027 Petunia axillaris
PGR004G1886 Punica granatum
PGR004G2794 Punica granatum
PGR044G2629 Punica granatum
Phvul.004G028700 Phaseolus vulgaris
Phvul.008G104000 Phaseolus vulgaris
Potri.001G208900 Populus trichocarpa
Potri.006G203601 Populus trichocarpa
Potri.011G095700 Populus trichocarpa
Potri.011G096201 Populus trichocarpa
Pp3c26_11250 Physcomitrium patens
Pp3c26_11260 Physcomitrium patens
PRCOL_00003825 Prasinoderma coloniale
Prupe.7G095000 Prunus persica
Psat0s1718g0120 Pisum sativum
Psat3g029120 Pisum sativum
Psat3g179800 Pisum sativum
Psat3g179840 Pisum sativum
Psat5g276400 Pisum sativum
Psat7g011720 Pisum sativum
PSO017G5751 Papaver somniferum
PSO478G2311 Papaver somniferum
PSO478G2592 Papaver somniferum
QL07p036804 Quercus lobata
RcHm_v2.0_Chr1g0331061 Rosa chinensis
RcHm_v2.0_Chr1g0331071 Rosa chinensis
RcHm_v2.0_Chr1g0331091 Rosa chinensis
RcHm_v2.0_Chr3g0475871 Rosa chinensis
Rhsim03G0064800 Rhododendron simsii
Sabra01G0161200 Salix brachista
Sabra06G0156800 Salix brachista
Sc22g0002860 Simmondsia chinensis
Sed0013531 Sechium edule
SEGI_14989 Sequoiadendron giganteum
SEGI_15424 Sequoiadendron giganteum
SEGI_27247 Sequoiadendron giganteum
SGA_v2.0_scaffold13G06632 Striga asiatica
SHI44568 Sapria himalayana
SMO114G0040 Selaginella moellendorffii
Solyc01g007140.3 Solanum lycopersicum
Sopen01g003120 Solanum pennellii
Sp6g36500 Schrenkiella parvula
THA.LOC104809952 Tarenaya hassleriana
THA.LOC104824536 Tarenaya hassleriana
Thecc.05G104000 Theobroma cacao
Thhalv10012647m.g Eutrema salsugineum
TPR.G35565 Trifolium pratense
TPR.G597 Trifolium pratense
TWI74G1036 Tripterygium wilfordii
unitig_8.g3983 Utricularia gibba
vmacro07476 Vaccinium macrocarpon
VMungo0647G1936 Vigna mungo
Zm00001eb080310 Zea mays

User provided reference genes

Program Settings