Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p36490 Brassica napus
A01p41860 Brassica napus
A03p40440 Brassica napus
A05p04500 Brassica napus
Aa31LG8G4770 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4114 Anthoceros agrestis
Actinidia05393 Actinidia chinensis
Ah.03g132020 Amaranthus hybridus
AL3G31070 Arabidopsis lyrata
Aqoxy4G02344 Aquilegia oxysepala
Aqoxy5G00175 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.B2D650 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K6PP8H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S53SYG Arachis hypogaea
AT3G17900 Arabidopsis thaliana
ATR0564G248 Amborella trichopoda
Atru.chr11.1851 Acer truncatum
AUR62026254 Chenopodium quinoa
AUR62026447 Chenopodium quinoa
BcaB04g18970 Brassica carinata
BcaB04g20809 Brassica carinata
BcaC01g03722 Brassica carinata
BcaC08g44394 Brassica carinata
BcaC09g48754 Brassica carinata
BolC1t04586H Brassica oleracea
BolC2t11814H Brassica oleracea
BolC3t15954H Brassica oleracea
BolC3t17207H Brassica oleracea
BolC3t17216H Brassica oleracea
BolC3t18505H Brassica oleracea
BraA01t03713Z Brassica rapa
BraA03t13202Z Brassica rapa
C01p46250 Brassica napus
C02p33030 Brassica napus
C03p36410 Brassica napus
C03p49280 Brassica napus
C03p62480 Brassica napus
C06p17170 Brassica napus
C08p43480 Brassica napus
CAN.G793.43 Capsicum annuum
CARHR093230 Cardamine hirsuta
Carub.0003s1763 Capsella rubella
Ca_04741_v3 Cicer arietinum L.
Ca_22853_v3 Cicer arietinum L.
Cc11_g13490 Coffea canephora
CDE02G2379 Ceratophyllum demersum
CDE09G0195 Ceratophyllum demersum
Cfa009037 Carpinus fangiana
Ciclev10030693m.g Citrus clementina
CiPaw.06G080600 Carya illinoinensis
CiPaw.06G080700 Carya illinoinensis
ClCG05G024580 Citrullus lanatus
COL.COLO4_07923 Corchorus olitorius
Cpa.g.sc5.276 Carica papaya
Cpa.g.sc5.277 Carica papaya
CsaV3_5G032370 Cucumis sativus L.
CSS0048330 Camellia sinensis var. sinensis
DCAR_027382 Daucus carota
Dinv24955 Davidia involucrata
Dinv34201 Davidia involucrata
Duzib248G1634 Durio zibethinus
Duzib268G1532 Durio zibethinus
ECA234G1496 Erigeron canadensis
ECA247G4086 Erigeron canadensis
EL10Ac6g13147 Beta vulgaris
Eucgr.B03410 Eucalyptus grandis
FAN07G1439 Fragaria x ananassa
FAN12G3951 Fragaria x ananassa
FAN17G1509 Fragaria x ananassa
FAN22G1878 Fragaria x ananassa
FvH4_4g31960 Fragaria vesca
Glyma.02G021900 Glycine max
Glyma.08G296300 Glycine max
Glyma.18G126000 Glycine max
Gohir.A12G166800 Gossypium hirsutum
Gohir.A12G166900 Gossypium hirsutum
Gohir.A13G052300 Gossypium hirsutum
Gohir.D12G170300 Gossypium hirsutum
Gohir.D13G068400 Gossypium hirsutum
Gorai.008G182900 Gossypium raimondii
Gorai.013G077900 Gossypium raimondii
GSVIVG01020074001 Vitis vinifera
GSVIVG01036940001 Vitis vinifera
HanXRQChr03g0092771 Helianthus annuus
HanXRQChr12g0369801 Helianthus annuus
Haze_12066 Corylus avellana
Hma1.2p1_1545F.1_g289900 Hydrangea macrophylla
HPP92_011033 Vanilla planifolia
Hund05913 Selenicereus undatus
Hund25271 Selenicereus undatus
Lalb_Chr09g0335271 Lupinus albus
Lalb_Chr16g0392581 Lupinus albus
Lalb_Chr17g0340361 Lupinus albus
Lalb_Chr17g0340371 Lupinus albus
Lj2g0020807 Lotus japonicus
Lj4g0012636 Lotus japonicus
Lsat_1_v5_gn_3_52120 Lactuca sativa
Lsat_1_v5_gn_4_9281 Lactuca sativa
Lsat_1_v5_gn_7_73540 Lactuca sativa
Lsat_1_v5_gn_8_54080 Lactuca sativa
Manes.05G096500 Manihot esculenta
Mapoly0224s0002 Marchantia polymorpha
MBI11_g00106_MAGBIO Magnolia biondii
MBI17_g39912_MAGBIO Magnolia biondii
MD13G1079000 Malus domestica
MD16G1078700 Malus domestica
Medtr5g038440 Medicago truncatula
Medtr8g469270 Medicago truncatula
MELO3C012068.2 Cucumis melo
Migut.L01344 Erythranthe guttata
MSTRG.2359 Avicennia marina
MSTRG.671 Avicennia marina
Nitab4.5_0008717g0030 Nicotiana tabacum
Nitab4.5_0009649g0020 Nicotiana tabacum
Nn1g02896 Nelumbo nucifera
Nn3g19739 Nelumbo nucifera
Nn7g36577 Nelumbo nucifera
Oeu011693.1 Olea europaea
Oeu028539.1 Olea europaea
Peaxi162Scf00209g00326 Petunia axillaris
PGR102G2139 Punica granatum
PGSC0003DMG402017622 Solanum tuberosum
Phvul.002G066500 Phaseolus vulgaris
Phvul.002G066700 Phaseolus vulgaris
Phvul.003G069800 Phaseolus vulgaris
Potri.008G194566 Populus trichocarpa
Potri.008G194632 Populus trichocarpa
Potri.010G033900 Populus trichocarpa
Pp3c16_680 Physcomitrium patens
Prupe.1G267800 Prunus persica
Psat0s2845g0120 Pisum sativum
Psat2g124400 Pisum sativum
Psat4g132120 Pisum sativum
PSO764G0096 Papaver somniferum
PSO832G3945 Papaver somniferum
QL03p065666 Quercus lobata
RcHm_v2.0_Chr1g0331861 Rosa chinensis
RcHm_v2.0_Chr1g0331881 Rosa chinensis
RcHm_v2.0_Chr1g0353921 Rosa chinensis
RcHm_v2.0_Chr4g0440641 Rosa chinensis
Rhsim01G0215700 Rhododendron simsii
Sabra10G0030700 Salix brachista
SalBow2G0733 Salvia bowleyana
SalBow2G2854 Salvia bowleyana
Sc11g0001680 Simmondsia chinensis
Sed0026408 Sechium edule
SEGI_39580 Sequoiadendron giganteum
SGA_v2.0_scaffold302G47866 Striga asiatica
SMO119G0368 Selaginella moellendorffii
Solyc05g007030.4 Solanum lycopersicum
Sopen05g002990 Solanum pennellii
Sp3g16020 Schrenkiella parvula
TAR362G0462 Trochodendron aralioides
THA.LOC104820344 Tarenaya hassleriana
Thecc.02G355300 Theobroma cacao
Thhalv10020058m.g Eutrema salsugineum
TPR.G13762 Trifolium pratense
TPR.G33257 Trifolium pratense
TWI36G0714 Tripterygium wilfordii
unitig_22.g6528 Utricularia gibba
unitig_8.g3946 Utricularia gibba
unitig_8.g3947 Utricularia gibba
vmacro07429 Vaccinium macrocarpon
VMungo0251G1664 Vigna mungo
VMungo1215G1372 Vigna mungo
Zm00001eb066230 Zea mays
Zm00001eb409770 Zea mays

User provided reference genes

Program Settings