Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p05730 Brassica napus
Aa31sc102G50 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3454 Anthoceros agrestis
Actinidia14642 Actinidia chinensis
Actinidia14643 Actinidia chinensis
Actinidia14644 Actinidia chinensis
Actinidia15714 Actinidia chinensis
Ah.00g238200 Amaranthus hybridus
Ah.12g063070 Amaranthus hybridus
AL7G19140 Arabidopsis lyrata
AL7G19760 Arabidopsis lyrata
Aqoxy7G01826 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.LJCF3U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WIN44D Arachis hypogaea
AT4G32620 Arabidopsis thaliana
ATR0037G018 Amborella trichopoda
Atru.chr7.2318 Acer truncatum
Atru.chr7.2319 Acer truncatum
AUR62024831 Chenopodium quinoa
AUR62032386 Chenopodium quinoa
BcaC09g52055 Brassica carinata
BolC1t00629H Brassica oleracea
BraA01t00543Z Brassica rapa
C01p06310 Brassica napus
CAN.G679.11 Capsicum annuum
CANSAT25G1939 Cannabis sativa
CARHR240590 Cardamine hirsuta
Carub.0007s0792 Capsella rubella
Ca_12906_v3 Cicer arietinum L.
CBR_g45468 Chara braunii
Cc08_g08260 Coffea canephora
CDE02G2261 Ceratophyllum demersum
CDE02G2306 Ceratophyllum demersum
CDE04G1031 Ceratophyllum demersum
CDE04G2426 Ceratophyllum demersum
Cfa013215 Carpinus fangiana
Ciclev10007235m.g Citrus clementina
CiPaw.07G217100 Carya illinoinensis
CiPaw.08G016200 Carya illinoinensis
ClCG05G017240 Citrullus lanatus
COL.COLO4_24072 Corchorus olitorius
Cpa.g.sc91.4 Carica papaya
CsaV3_3G046720 Cucumis sativus L.
CSS0008422 Camellia sinensis var. sinensis
CSS0015303 Camellia sinensis var. sinensis
CSS0040563 Camellia sinensis var. sinensis
DCAR_003068 Daucus carota
DCAR_007679 Daucus carota
Dinv30217 Davidia involucrata
Dinv35877 Davidia involucrata
Duzib150G0930 Durio zibethinus
Duzib168G1204 Durio zibethinus
Duzib187G1611 Durio zibethinus
ECA246G4952 Erigeron canadensis
EL10Ac2g02532 Beta vulgaris
Eucgr.C01559 Eucalyptus grandis
Eucgr.C01562 Eucalyptus grandis
Eucgr.C01819 Eucalyptus grandis
Eucgr.C01845 Eucalyptus grandis
Eucgr.C01848 Eucalyptus grandis
Eucgr.L00986 Eucalyptus grandis
FAN15G1142 Fragaria x ananassa
FAN20G1010 Fragaria x ananassa
FAN24G2685 Fragaria x ananassa
FAN27G0259 Fragaria x ananassa
FvH4_2g30210 Fragaria vesca
Glyma.14G129600 Glycine max
Glyma.14G129700 Glycine max
Glyma.17G204300 Glycine max
Glyma.17G204700 Glycine max
Gohir.A07G038500 Gossypium hirsutum
Gohir.A13G203700 Gossypium hirsutum
Gohir.D07G042600 Gossypium hirsutum
Gohir.D13G209000 Gossypium hirsutum
Gorai.001G045600 Gossypium raimondii
Gorai.013G238100 Gossypium raimondii
GSVIVG01035731001 Vitis vinifera
HanXRQChr12g0381921 Helianthus annuus
Haze_21628 Corylus avellana
Haze_21629 Corylus avellana
HPP92_009885 Vanilla planifolia
Hund25656 Selenicereus undatus
Lalb_Chr08g0243761 Lupinus albus
Lalb_Chr22g0361331 Lupinus albus
Lalb_Chr23g0268991 Lupinus albus
Lalb_Chr23g0269001 Lupinus albus
Lj5g0002104 Lotus japonicus
Lj8A609T43 Lonicera japonica
Lj8C609G9 Lonicera japonica
Lsat_1_v5_gn_5_45480 Lactuca sativa
Manes.16G068600 Manihot esculenta
Mapoly0176s0001 Marchantia polymorpha
MBI01_g03365_MAGBIO Magnolia biondii
MD08G1135600 Malus domestica
MD15G1114600 Malus domestica
Medtr1g010290 Medicago truncatula
MELO3C003664.2 Cucumis melo
Migut.A00268 Erythranthe guttata
Migut.E01505 Erythranthe guttata
MSTRG.14005 Avicennia marina
MSTRG.1650 Avicennia marina
MSTRG.25879 Avicennia marina
Nitab4.5_0000125g0100 Nicotiana tabacum
Nitab4.5_0005258g0030 Nicotiana tabacum
Nn2g11816 Nelumbo nucifera
Nn2g11817 Nelumbo nucifera
Nn8g39260 Nelumbo nucifera
Oeu019414.3 Olea europaea
Oeu027165.1 Olea europaea
Oeu033312.1 Olea europaea
Oeu045173.1 Olea europaea
Os01g0179500 Oryza sativa ssp. japonica
Peaxi162Scf00105g01221 Petunia axillaris
PGR044G1488 Punica granatum
PGSC0003DMG400014479 Solanum tuberosum
PGSC0003DMG400014480 Solanum tuberosum
PGSC0003DMG400014482 Solanum tuberosum
Phvul.001G055900 Phaseolus vulgaris
Phvul.009G098700 Phaseolus vulgaris
Potri.006G246200 Populus trichocarpa
Potri.018G034900 Populus trichocarpa
Pp3c11_12130 Physcomitrium patens
Pp3c7_14100 Physcomitrium patens
Prupe.1G466100 Prunus persica
Psat0s1646g0200 Pisum sativum
Psat6g031120 Pisum sativum
PSO063G3196 Papaver somniferum
PSO782G2545 Papaver somniferum
QL12p031184 Quercus lobata
RcHm_v2.0_Chr6g0312671 Rosa chinensis
Rhsim07G0154400 Rhododendron simsii
Rhsim07G0154500 Rhododendron simsii
Sabra06G0192700 Salix brachista
Sabra18G0035700 Salix brachista
SalBow4G1030 Salvia bowleyana
Sc09g0008880 Simmondsia chinensis
Sed0018977 Sechium edule
Sed0026318 Sechium edule
SEGI_27449 Sequoiadendron giganteum
SGA_v2.0_scaffold27G11503 Striga asiatica
SGA_v2.0_scaffold448G51787 Striga asiatica
SHI18618 Sapria himalayana
SMO164G0124 Selaginella moellendorffii
Solyc08g067920.3 Solanum lycopersicum
Sopen08g021830 Solanum pennellii
Sp7g30390 Schrenkiella parvula
TAR383G0292 Trochodendron aralioides
TAR624G1047 Trochodendron aralioides
TAR636G1526 Trochodendron aralioides
TAR636G2779 Trochodendron aralioides
THA.LOC104819891 Tarenaya hassleriana
Thecc.09G143700 Theobroma cacao
Thhalv10024206m.g Eutrema salsugineum
TPR.G20101 Trifolium pratense
TPR.G20104 Trifolium pratense
TWI34G0955 Tripterygium wilfordii
TWI63G0485 Tripterygium wilfordii
unitig_0.g2812 Utricularia gibba
unitig_747.g21877 Utricularia gibba
vmacro05451 Vaccinium macrocarpon
vmacro05452 Vaccinium macrocarpon
VMungo0647G1247 Vigna mungo
VMungo1309G1581 Vigna mungo
VMungo1309G3111 Vigna mungo
Zm00001eb073690 Zea mays
Zm00001eb122250 Zea mays
Zm00001eb337050 Zea mays

User provided reference genes

Program Settings