Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p37290 Brassica napus
Aa31sc80G90 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3694 Anthoceros agrestis
Actinidia14376 Actinidia chinensis
Actinidia22049 Actinidia chinensis
Actinidia32404 Actinidia chinensis
Ah.04g152830 Amaranthus hybridus
AL3G23660 Arabidopsis lyrata
Aqoxy1G00140 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.20Y790 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.86C462 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EPN7T6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G8NWJQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VQQW03 Arachis hypogaea
AT3G12050 Arabidopsis thaliana
ATR0598G178 Amborella trichopoda
Atru.chr8.1148 Acer truncatum
AUR62011998 Chenopodium quinoa
AUR62015343 Chenopodium quinoa
BcaB06g25550 Brassica carinata
BcaC05g29294 Brassica carinata
BcaC09g48210 Brassica carinata
BolC5t34243H Brassica oleracea
BraA05t22525Z Brassica rapa
C05p55760 Brassica napus
CAN.G960.10 Capsicum annuum
CANSAT64G0207 Cannabis sativa
CARHR086620 Cardamine hirsuta
Carub.0003s1139 Capsella rubella
Ca_03268_v3 Cicer arietinum L.
Ca_08533_v3 Cicer arietinum L.
Ca_09720_v3 Cicer arietinum L.
Ca_12039_v3 Cicer arietinum L.
Ca_12045_v3 Cicer arietinum L.
Ca_14569_v3 Cicer arietinum L.
Ca_20435_v3 Cicer arietinum L.
Ca_20824_v3 Cicer arietinum L.
Ca_31327_v3 Cicer arietinum L.
CBR_g18730 Chara braunii
Cc06_g15710 Coffea canephora
CDE05G2508 Ceratophyllum demersum
CDE11G0833 Ceratophyllum demersum
Cfa020150 Carpinus fangiana
Ciclev10012043m.g Citrus clementina
CiPaw.09G029000 Carya illinoinensis
CiPaw.10G025600 Carya illinoinensis
ClCG10G017650 Citrullus lanatus
COL.COLO4_29349 Corchorus olitorius
Cpa.g.sc85.60 Carica papaya
Cre03.g199300 Chlamydomonas reinhardtii
CsaV3_3G038670 Cucumis sativus L.
CsaV3_5G015400 Cucumis sativus L.
CSS0018208 Camellia sinensis var. sinensis
DCAR_017036 Daucus carota
Dinv18648 Davidia involucrata
Dinv18651 Davidia involucrata
Dinv24057 Davidia involucrata
Dinv26263 Davidia involucrata
Duzib093G1627 Durio zibethinus
Duzib128G0491 Durio zibethinus
ECA248G0025 Erigeron canadensis
EL10Ac3g06892 Beta vulgaris
Eucgr.A02465 Eucalyptus grandis
FAN02G1826 Fragaria x ananassa
FAN05G2657 Fragaria x ananassa
FAN09G3507 Fragaria x ananassa
FAN14G0097 Fragaria x ananassa
FvH4_6g21990 Fragaria vesca
Glyma.02G171100 Glycine max
Glyma.03G146100 Glycine max
Glyma.09G095600 Glycine max
Glyma.09G109200 Glycine max
Glyma.19G149300 Glycine max
Gohir.A04G051900 Gossypium hirsutum
Gohir.A04G052000 Gossypium hirsutum
Gohir.A04G052026 Gossypium hirsutum
Gohir.D04G089400 Gossypium hirsutum
Gohir.D04G089500 Gossypium hirsutum
Gorai.012G099500 Gossypium raimondii
Gorai.012G099600 Gossypium raimondii
GSVIVG01033476001 Vitis vinifera
HanXRQChr01g0010591 Helianthus annuus
HanXRQChr03g0083061 Helianthus annuus
Haze_20012 Corylus avellana
Hma1.2p1_0676F.1_g201930 Hydrangea macrophylla
HPP92_005766 Vanilla planifolia
HPP92_009321 Vanilla planifolia
Hund19209 Selenicereus undatus
Hund24813 Selenicereus undatus
Lalb_Chr18g0047991 Lupinus albus
Lj1g0002782 Lotus japonicus
Lj2A365T90 Lonicera japonica
Lj5g0013930 Lotus japonicus
Lju124A24T32 Lonicera japonica
Lsat_1_v5_gn_5_164500 Lactuca sativa
Manes.08G042800 Manihot esculenta
Manes.09G037400 Manihot esculenta
Mapoly0109s0023 Marchantia polymorpha
MBI19_g17419_MAGBIO Magnolia biondii
MCO07G236 Micromonas commoda
MD12G1055300 Malus domestica
MD14G1054700 Malus domestica
Medtr0136s0060 Medicago truncatula
Medtr7g093500 Medicago truncatula
MELO3C009611.2 Cucumis melo
Migut.J01850 Erythranthe guttata
MSTRG.19915 Avicennia marina
Nitab4.5_0000105g0210 Nicotiana tabacum
Nitab4.5_0001137g0010 Nicotiana tabacum
Nitab4.5_0002343g0010 Nicotiana tabacum
Nitab4.5_0007274g0010 Nicotiana tabacum
Nn7g35971 Nelumbo nucifera
Nn7g35972 Nelumbo nucifera
Nn8g39306 Nelumbo nucifera
Oeu006209.1 Olea europaea
Oeu063867.1 Olea europaea
Os08g0464000 Oryza sativa ssp. japonica
Peaxi162Scf00258g00921 Petunia axillaris
PGR004G2452 Punica granatum
PGSC0003DMG400011447 Solanum tuberosum
PGSC0003DMG400035352 Solanum tuberosum
Phvul.001G143800 Phaseolus vulgaris
Phvul.007G261100 Phaseolus vulgaris
Potri.006G194400 Populus trichocarpa
Potri.016G060100 Populus trichocarpa
Pp3c15_21400 Physcomitrium patens
Pp3c9_15400 Physcomitrium patens
PRCOL_00005901 Prasinoderma coloniale
Prupe.7G080100 Prunus persica
Psat3g067000 Pisum sativum
Psat6g123080 Pisum sativum
PSO135G0566 Papaver somniferum
PSO724G0609 Papaver somniferum
QL07p024293 Quercus lobata
RcHm_v2.0_Chr3g0479291 Rosa chinensis
Rhsim03G0004900 Rhododendron simsii
Sabra06G0149100 Salix brachista
Sabra16G0062900 Salix brachista
SalBow6G5303 Salvia bowleyana
Sc13g0002360 Simmondsia chinensis
Sed0007356 Sechium edule
SEGI_05882 Sequoiadendron giganteum
SEGI_39925 Sequoiadendron giganteum
SGA_v2.0_scaffold105G30499 Striga asiatica
SGA_v2.0_scaffold69G23056 Striga asiatica
SMO203G0054 Selaginella moellendorffii
Solyc10g078930.2 Solanum lycopersicum
Sopen02g001110 Solanum pennellii
Sopen10g029550 Solanum pennellii
Sp3g10280 Schrenkiella parvula
TAR633G0428 Trochodendron aralioides
TAR636G0728 Trochodendron aralioides
THA.LOC104809934 Tarenaya hassleriana
THA.LOC104826776 Tarenaya hassleriana
Thecc.05G174300 Theobroma cacao
Thhalv10021006m.g Eutrema salsugineum
TPR.G30301 Trifolium pratense
TPR.G35793 Trifolium pratense
TWI53G2154 Tripterygium wilfordii
TWI74G1529 Tripterygium wilfordii
unitig_746.g26803 Utricularia gibba
unitig_899.g15167 Utricularia gibba
vmacro07894 Vaccinium macrocarpon
VMungo0464G0530 Vigna mungo
VMungo0720G0815 Vigna mungo
VMungo1383G0826 Vigna mungo
Zm00001eb037640 Zea mays
Zm00001eb177410 Zea mays

User provided reference genes

Program Settings