Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p37680 Brassica napus
A09p68730 Brassica napus
A10p01190 Brassica napus
Aa31LG1G10050 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.342 Anthoceros agrestis
Actinidia28789 Actinidia chinensis
AL1G11770 Arabidopsis lyrata
Aqoxy3G04002 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.87SQNY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F8HJNJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GZZ31L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U9M4C7 Arachis hypogaea
AT1G02410 Arabidopsis thaliana
ATR0626G272 Amborella trichopoda
Atru.chr1.1960 Acer truncatum
Atru.chr4.1444 Acer truncatum
AUR62023515 Chenopodium quinoa
AUR62037409 Chenopodium quinoa
AUR62038774 Chenopodium quinoa
BcaB01g06133 Brassica carinata
BcaB01g06136 Brassica carinata
BcaB03g13511 Brassica carinata
BcaB03g13513 Brassica carinata
BcaB03g15782 Brassica carinata
BcaB08g36056 Brassica carinata
BcaC02g12462 Brassica carinata
BcaC04g20051 Brassica carinata
BcaC05g24626 Brassica carinata
BcaC05g24628 Brassica carinata
BcaC07g42317 Brassica carinata
BcaC07g42390 Brassica carinata
BcaNung06859 Brassica carinata
BcaNung06861 Brassica carinata
BcaNung06862 Brassica carinata
BcaNung07044 Brassica carinata
BolC3t12580H Brassica oleracea
BolC5t28904H Brassica oleracea
BolC8t52845H Brassica oleracea
BolC9t57687H Brassica oleracea
BraA08t35664Z Brassica rapa
BraA09t42212Z Brassica rapa
BraA10t42397Z Brassica rapa
C03p00140 Brassica napus
C04p03290 Brassica napus
C05p01210 Brassica napus
C08p53300 Brassica napus
C09p48370 Brassica napus
CAN.G616.15 Capsicum annuum
CANSAT35G0424 Cannabis sativa
CARHR001740 Cardamine hirsuta
Carub.0001s0149 Capsella rubella
Ca_17077_v3 Cicer arietinum L.
CBR_g51986 Chara braunii
Cc07_g12990 Coffea canephora
CDE04G3693 Ceratophyllum demersum
CDE06G2511 Ceratophyllum demersum
Cfa007770 Carpinus fangiana
Cfa022599 Carpinus fangiana
Ciclev10002120m.g Citrus clementina
CiPaw.03G077800 Carya illinoinensis
CiPaw.04G048600 Carya illinoinensis
ClCG07G009570 Citrullus lanatus
COL.COLO4_19858 Corchorus olitorius
Cre01.g055550 Chlamydomonas reinhardtii
CsaV3_4G004740 Cucumis sativus L.
CsaV3_UNG141080 Cucumis sativus L.
CsaV3_UNG144100 Cucumis sativus L.
CsaV3_UNG216460 Cucumis sativus L.
CSS0050506 Camellia sinensis var. sinensis
DCAR_005091 Daucus carota
DCAR_025183 Daucus carota
Dinv36681 Davidia involucrata
Duzib168G0342 Durio zibethinus
Duzib170G0191 Durio zibethinus
ECA238G1245 Erigeron canadensis
EL10Ac1g00114 Beta vulgaris
Eucgr.J01628 Eucalyptus grandis
FAN01G2657 Fragaria x ananassa
FAN03G0820 Fragaria x ananassa
FAN06G4796 Fragaria x ananassa
FAN10G1720 Fragaria x ananassa
FAN10G4152 Fragaria x ananassa
Glyma.11G213600 Glycine max
Glyma.18G043100 Glycine max
Gohir.A07G110500 Gossypium hirsutum
Gohir.A08G125401 Gossypium hirsutum
Gohir.A10G080150 Gossypium hirsutum
Gohir.A11G203400 Gossypium hirsutum
Gohir.D07G114100 Gossypium hirsutum
Gorai.001G122400 Gossypium raimondii
GSVIVG01024421001 Vitis vinifera
HanXRQChr03g0088171 Helianthus annuus
HanXRQChr13g0395861 Helianthus annuus
HanXRQChr16g0532751 Helianthus annuus
Haze_14304 Corylus avellana
Haze_26263 Corylus avellana
Haze_26986 Corylus avellana
Hma1.2p1_0034F.1_g021300 Hydrangea macrophylla
Hma1.2p1_0158F.1_g069830 Hydrangea macrophylla
HPP92_002286 Vanilla planifolia
Hund18774 Selenicereus undatus
Lalb_Chr18g0053671 Lupinus albus
Lalb_Chr20g0117051 Lupinus albus
Lj2A513G59 Lonicera japonica
Lj4A255T25 Lonicera japonica
Lj6g0015186 Lotus japonicus
Lsat_1_v5_gn_3_67200 Lactuca sativa
Manes.16G049900 Manihot esculenta
Mapoly0070s0059 Marchantia polymorpha
MBI16_g12479_MAGBIO Magnolia biondii
MCO11G668 Micromonas commoda
MD02G1272100 Malus domestica
MD07G1041100 Malus domestica
Medtr3g053650 Medicago truncatula
Medtr3g064810 Medicago truncatula
MELO3C017589.2 Cucumis melo
Migut.H02241 Erythranthe guttata
MSTRG.15643 Avicennia marina
Nitab4.5_0000905g0140 Nicotiana tabacum
Nitab4.5_0013309g0010 Nicotiana tabacum
Nn1g04486 Nelumbo nucifera
Oeu009434.1 Olea europaea
Oeu009435.1 Olea europaea
Oeu048969.2 Olea europaea
Oeu062160.1 Olea europaea
Os03g0718600 Oryza sativa ssp. japonica
Peaxi162Scf00525g00621 Petunia axillaris
PGR042G3225 Punica granatum
PGR102G3261 Punica granatum
Phvul.001G227800 Phaseolus vulgaris
Potri.001G078500 Populus trichocarpa
Pp3c16_1230 Physcomitrium patens
PRCOL_00006103 Prasinoderma coloniale
Prupe.3G281100 Prunus persica
Prupe.7G012700 Prunus persica
Psat5g142040 Pisum sativum
PSO170G2172 Papaver somniferum
PSO782G2695 Papaver somniferum
QL02p060046 Quercus lobata
RcHm_v2.0_Chr1g0359421 Rosa chinensis
RcHm_v2.0_Chr3g0452351 Rosa chinensis
Rhsim05G0054900 Rhododendron simsii
Rhsim08G0020500 Rhododendron simsii
Sabra01G0055800 Salix brachista
SalBow3G3518 Salvia bowleyana
Sc18g0000970 Simmondsia chinensis
Sed0013521 Sechium edule
Sed0015810 Sechium edule
SEGI_01185 Sequoiadendron giganteum
SGA_v2.0_scaffold108G30989 Striga asiatica
SGA_v2.0_scaffold2G00964 Striga asiatica
SHI20752 Sapria himalayana
SMO169G0145 Selaginella moellendorffii
Solyc05g012440.4 Solanum lycopersicum
Sopen05g007260 Solanum pennellii
Sp1g01500 Schrenkiella parvula
TAR002G0001 Trochodendron aralioides
TAR629G3342 Trochodendron aralioides
THA.LOC104815917 Tarenaya hassleriana
Thecc.09G283000 Theobroma cacao
Thhalv10008363m.g Eutrema salsugineum
TPR.G26653 Trifolium pratense
TWI23G0771 Tripterygium wilfordii
unitig_32.g10726 Utricularia gibba
vmacro18517 Vaccinium macrocarpon
vmacro19339 Vaccinium macrocarpon
VMungo1383G1060 Vigna mungo
Zm00001eb055360 Zea mays

User provided reference genes

Program Settings