Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p09970 Brassica napus
A03p50870 Brassica napus
A04p26910 Brassica napus
A05p10320 Brassica napus
A06p45780 Brassica napus
A09p22450 Brassica napus
Aa31LG6G680 Aethionema arabicum
Aa31LG9G6220 Aethionema arabicum
AL4G31460 Arabidopsis lyrata
AL7G36580 Arabidopsis lyrata
AL8G11690 Arabidopsis lyrata
Aqoxy2G00492 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8Z1ZFD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.APQR8A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GHXX5X Arachis hypogaea
AT2G35420 Arabidopsis thaliana
AT4G17920 Arabidopsis thaliana
AT5G46650 Arabidopsis thaliana
Atru.chr1.3906 Acer truncatum
Atru.chr6.1654 Acer truncatum
AUR62010949 Chenopodium quinoa
BcaB02g09432 Brassica carinata
BcaB06g28842 Brassica carinata
BcaB07g30827 Brassica carinata
BcaC02g07714 Brassica carinata
BcaC02g11647 Brassica carinata
BcaC04g21692 Brassica carinata
BcaC06g31459 Brassica carinata
BcaC06g31460 Brassica carinata
BcaC06g33617 Brassica carinata
BcaC06g34363 Brassica carinata
BcaC09g51584 Brassica carinata
BcaNung00043 Brassica carinata
BolC1t01139H Brassica oleracea
BolC4t22944H Brassica oleracea
BolC4t27917H Brassica oleracea
BolC7t43537H Brassica oleracea
BolC7t45435H Brassica oleracea
BolC9t55737H Brassica oleracea
BraA01t00941Z Brassica rapa
BraA03t14174Z Brassica rapa
BraA04t18190Z Brassica rapa
BraA05t19970Z Brassica rapa
BraA06t27447Z Brassica rapa
BraA09t37849Z Brassica rapa
C01p11770 Brassica napus
C04p12760 Brassica napus
C04p64300 Brassica napus
C07p29900 Brassica napus
C07p49260 Brassica napus
C09p28770 Brassica napus
CANSAT21G2412 Cannabis sativa
CARHR129580 Cardamine hirsuta
CARHR174850 Cardamine hirsuta
CARHR224660 Cardamine hirsuta
Carub.0004s1710 Capsella rubella
Carub.0007s2341 Capsella rubella
Carub.0008s0126 Capsella rubella
Ca_02432_v3 Cicer arietinum L.
Cc08_g02970 Coffea canephora
CDE02G2667 Ceratophyllum demersum
Cfa012458 Carpinus fangiana
Ciclev10018251m.g Citrus clementina
CiPaw.11G095300 Carya illinoinensis
CiPaw.12G065000 Carya illinoinensis
COL.COLO4_17001 Corchorus olitorius
Cpa.g.sc90.65 Carica papaya
CsaV3_3G049040 Cucumis sativus L.
Dinv28970 Davidia involucrata
Duzib068G0996 Durio zibethinus
Duzib084G1131 Durio zibethinus
EL10Ac5g12085 Beta vulgaris
Eucgr.D02209 Eucalyptus grandis
FAN04G2730 Fragaria x ananassa
FAN08G3347 Fragaria x ananassa
FAN13G0585 Fragaria x ananassa
FAN18G1640 Fragaria x ananassa
FAN18G3493 Fragaria x ananassa
FvH4_5g22380 Fragaria vesca
Glyma.01G017200 Glycine max
Glyma.01G095300 Glycine max
Glyma.08G270800 Glycine max
Gohir.A08G155750 Gossypium hirsutum
Gohir.A09G199500 Gossypium hirsutum
Gohir.A11G031200 Gossypium hirsutum
Gohir.A12G207700 Gossypium hirsutum
Gohir.D08G176350 Gossypium hirsutum
Gohir.D09G193801 Gossypium hirsutum
Gohir.D11G029900 Gossypium hirsutum
Gohir.D12G210100 Gossypium hirsutum
Gorai.004G184200 Gossypium raimondii
Gorai.006G217300 Gossypium raimondii
Gorai.007G032700 Gossypium raimondii
Gorai.008G225700 Gossypium raimondii
HanXRQChr06g0167631 Helianthus annuus
Haze_08209 Corylus avellana
Hma1.2p1_0574F.1_g181550 Hydrangea macrophylla
Hma1.2p1_1379F.1_g279200 Hydrangea macrophylla
HPP92_014953 Vanilla planifolia
HPP92_014976 Vanilla planifolia
Lalb_Chr05g0215941 Lupinus albus
Lalb_Chr16g0381281 Lupinus albus
Lj2g0009585 Lotus japonicus
Lj2P236T40 Lonicera japonica
Lj4g0025089 Lotus japonicus
Lj7P409T32 Lonicera japonica
Lj8P304T36 Lonicera japonica
Lsat_1_v5_gn_3_18761 Lactuca sativa
Lsat_1_v5_gn_4_171720 Lactuca sativa
Lsat_1_v5_gn_6_4060 Lactuca sativa
Manes.15G192900 Manihot esculenta
MBI04_g28366_MAGBIO Magnolia biondii
MBI04_g33886_MAGBIO Magnolia biondii
MBI04_g33887_MAGBIO Magnolia biondii
MD06G1036300 Malus domestica
Medtr5g076990 Medicago truncatula
Medtr8g066740 Medicago truncatula
MELO3C003422.2 Cucumis melo
MELO3C034973.2 Cucumis melo
Migut.E00761 Erythranthe guttata
MSTRG.1989 Avicennia marina
Nitab4.5_0000556g0020 Nicotiana tabacum
Nitab4.5_0003568g0020 Nicotiana tabacum
Nitab4.5_0004551g0020 Nicotiana tabacum
Nn1g00135 Nelumbo nucifera
Oeu006243.1 Olea europaea
Peaxi162Scf00045g00110 Petunia axillaris
Peaxi162Scf00236g00042 Petunia axillaris
PGR031G0838 Punica granatum
PGR083G1727 Punica granatum
Phvul.002G140200 Phaseolus vulgaris
Phvul.003G284300 Phaseolus vulgaris
Potri.001G140900 Populus trichocarpa
Potri.003G093500 Populus trichocarpa
Prupe.5G033100 Prunus persica
Psat2g173120 Pisum sativum
Psat2g173160 Pisum sativum
PSO017G0865 Papaver somniferum
QL12p004841 Quercus lobata
QL12p004859 Quercus lobata
RcHm_v2.0_Chr7g0210121 Rosa chinensis
Rhsim11G0016900 Rhododendron simsii
Sc22g0001620 Simmondsia chinensis
Sed0020036 Sechium edule
Sed0020307 Sechium edule
SGA_v2.0_scaffold20G09090 Striga asiatica
SGA_v2.0_scaffold6G03146 Striga asiatica
SHI07307 Sapria himalayana
Solyc08g005110.1 Solanum lycopersicum
Solyc08g076800.4 Solanum lycopersicum
Sopen08g025320 Solanum pennellii
Sp2g11480 Schrenkiella parvula
Sp4g17640 Schrenkiella parvula
Sp7g16180 Schrenkiella parvula
THA.LOC104814701 Tarenaya hassleriana
THA.LOC104827752 Tarenaya hassleriana
Thecc.03G225200 Theobroma cacao
Thhalv10001206m.g Eutrema salsugineum
Thhalv10017563m.g Eutrema salsugineum
Thhalv10025826m.g Eutrema salsugineum
TPR.G19640 Trifolium pratense
TWI81G0765 Tripterygium wilfordii
unitig_52.g17204 Utricularia gibba
unitig_699.g19787 Utricularia gibba
vmacro00316 Vaccinium macrocarpon
VMungo0251G1136 Vigna mungo
VMungo1080G1843 Vigna mungo
VMungo1215G2245 Vigna mungo
VMungo1383G1550 Vigna mungo

User provided reference genes

Program Settings