Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p24650 Brassica napus
A04p33170 Brassica napus
Aa31LG10G14140 Aethionema arabicum
Aa31LG1G25720 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4461 Anthoceros agrestis
Actinidia18388 Actinidia chinensis
Ah.13g073140 Amaranthus hybridus
AL4G42920 Arabidopsis lyrata
Aqoxy7G00623 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.HHGT95 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MYV34H Arachis hypogaea
AT2G44050 Arabidopsis thaliana
ATR0743G183 Amborella trichopoda
Atru.chr3.1980 Acer truncatum
Atru.chr8.1217 Acer truncatum
AUR62002492 Chenopodium quinoa
AUR62023693 Chenopodium quinoa
BcaB01g03334 Brassica carinata
BcaB06g29353 Brassica carinata
BcaB06g29512 Brassica carinata
BcaC02g07139 Brassica carinata
BcaC05g25876 Brassica carinata
BolC3t15286H Brassica oleracea
BolC4t28587H Brassica oleracea
BolC5t30540H Brassica oleracea
BolC5t30675H Brassica oleracea
BolC8t52208H Brassica oleracea
BraA03t11671Z Brassica rapa
BraA04t18776Z Brassica rapa
C03p29390 Brassica napus
C05p19750 Brassica napus
C08p46660 Brassica napus
CAN.G566.44 Capsicum annuum
CAN.G607.11 Capsicum annuum
CANSAT78G2301 Cannabis sativa
CARHR139210 Cardamine hirsuta
Carub.0004s2660 Capsella rubella
Ca_18245_v3 Cicer arietinum L.
Ca_28575_v3 Cicer arietinum L.
CBR_g29269 Chara braunii
Cc00_g07230 Coffea canephora
Cc00_g07240 Coffea canephora
Cc00_g08810 Coffea canephora
Cc00_g12430 Coffea canephora
Cc00_g15810 Coffea canephora
Cc00_g15820 Coffea canephora
Cc00_g16880 Coffea canephora
Cc00_g23590 Coffea canephora
Cc00_g25460 Coffea canephora
Cc00_g34060 Coffea canephora
Cc05_g00900 Coffea canephora
Cc05_g01000 Coffea canephora
Cc05_g01010 Coffea canephora
Cc05_g03580 Coffea canephora
CDE09G0590 Ceratophyllum demersum
Cfa027194 Carpinus fangiana
Ciclev10022149m.g Citrus clementina
CiPaw.01G202700 Carya illinoinensis
ClCG08G010210 Citrullus lanatus
COL.COLO4_27572 Corchorus olitorius
Cpa.g.sc9.245 Carica papaya
Cre02.g088850 Chlamydomonas reinhardtii
CsaV3_6G032410 Cucumis sativus L.
CSS0012879 Camellia sinensis var. sinensis
CSS0013668 Camellia sinensis var. sinensis
CSS0024434 Camellia sinensis var. sinensis
CSS0034557 Camellia sinensis var. sinensis
CSS0036502 Camellia sinensis var. sinensis
DCAR_027490 Daucus carota
Dinv24743 Davidia involucrata
Duzib093G0607 Durio zibethinus
Duzib212G0492 Durio zibethinus
ECA233G0955 Erigeron canadensis
EL10Ac3g06178 Beta vulgaris
EL10Ac4g08581 Beta vulgaris
Eucgr.F02801 Eucalyptus grandis
Eucgr.L01202 Eucalyptus grandis
FAN15G1026 Fragaria x ananassa
FAN24G2282 Fragaria x ananassa
FAN26G2986 Fragaria x ananassa
FvH4_1g00110 Fragaria vesca
FvH4_2g10600 Fragaria vesca
Glyma.08G087500 Glycine max
Gohir.A04G135700 Gossypium hirsutum
Gohir.A11G012100 Gossypium hirsutum
Gohir.D04G178800 Gossypium hirsutum
Gohir.D11G011300 Gossypium hirsutum
Gorai.007G012700 Gossypium raimondii
Gorai.012G171900 Gossypium raimondii
GSVIVG01038261001 Vitis vinifera
HanXRQChr13g0392171 Helianthus annuus
HanXRQChr13g0392191 Helianthus annuus
Haze_11113 Corylus avellana
Hma1.2p1_0872F.1_g231180 Hydrangea macrophylla
HPP92_005601 Vanilla planifolia
Hund22685 Selenicereus undatus
Lalb_Chr12g0209091 Lupinus albus
Lalb_Chr13g0292401 Lupinus albus
Lj4A426G8 Lonicera japonica
Lj4g0008259 Lotus japonicus
Lj5A837G66 Lonicera japonica
Lsat_1_v5_gn_8_13760 Lactuca sativa
Lsat_1_v5_gn_8_33320 Lactuca sativa
Lsat_1_v5_gn_8_33340 Lactuca sativa
Manes.02G102600 Manihot esculenta
Mapoly0120s0006 Marchantia polymorpha
MBI07_g44299_MAGBIO Magnolia biondii
MD15G1142400 Malus domestica
Medtr4g094700 Medicago truncatula
MELO3C011439.2 Cucumis melo
Migut.G00913 Erythranthe guttata
MSTRG.24546 Avicennia marina
Nitab4.5_0000013g0020 Nicotiana tabacum
Nitab4.5_0000668g0110 Nicotiana tabacum
Nitab4.5_0001091g0070 Nicotiana tabacum
Nitab4.5_0001110g0040 Nicotiana tabacum
Nitab4.5_0004802g0010 Nicotiana tabacum
Nitab4.5_0010298g0020 Nicotiana tabacum
Nn1g09410 Nelumbo nucifera
Oeu014981.1 Olea europaea
Os04g0497400 Oryza sativa ssp. japonica
Peaxi162Scf00459g00125 Petunia axillaris
PGR142G1214 Punica granatum
PGR142G2669 Punica granatum
PGSC0003DMG400025217 Solanum tuberosum
PGSC0003DMG400029273 Solanum tuberosum
Phvul.002G189800 Phaseolus vulgaris
Potri.007G146000 Populus trichocarpa
Potri.017G001800 Populus trichocarpa
Pp3c16_5700 Physcomitrium patens
Pp3c27_2710 Physcomitrium patens
Pp3s30_1010 Physcomitrium patens
Prupe.7G270800 Prunus persica
Psat5g058760 Pisum sativum
Psat7g088840 Pisum sativum
PSO675G2617 Papaver somniferum
PSO732G0016 Papaver somniferum
QL08p018107 Quercus lobata
QL08p018116 Quercus lobata
QL10p064677 Quercus lobata
QL10p065802 Quercus lobata
RcHm_v2.0_Chr2g0084411 Rosa chinensis
RcHm_v2.0_Chr7g0214271 Rosa chinensis
RcHm_v2.0_Chr7g0227511 Rosa chinensis
Sabra17G0005800 Salix brachista
SalBow6G0100 Salvia bowleyana
Sc13g0007610 Simmondsia chinensis
Sed0015421 Sechium edule
Sed0022244 Sechium edule
SGA_v2.0_scaffold37G14906 Striga asiatica
SMO198G0030 Selaginella moellendorffii
Solyc08g015660.3 Solanum lycopersicum
Solyc12g096590.3 Solanum lycopersicum
Sopen08g005770 Solanum pennellii
Sopen12g032420 Solanum pennellii
Sp4g26130 Schrenkiella parvula
TAR362G0423 Trochodendron aralioides
TAR365G0664 Trochodendron aralioides
THA.LOC104802349 Tarenaya hassleriana
THA.LOC104804375 Tarenaya hassleriana
Thecc.05G001000 Theobroma cacao
Thhalv10001807m.g Eutrema salsugineum
TPR.G18090 Trifolium pratense
TPR.G31246 Trifolium pratense
TWI15G0067 Tripterygium wilfordii
unitig_85.g27225 Utricularia gibba
vmacro00726 Vaccinium macrocarpon
VMungo0251G0005 Vigna mungo
Zm00001eb068110 Zea mays
Zm00001eb432360 Zea mays

User provided reference genes

Program Settings