Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p31940 Brassica napus
Aa31LG1G21150 Aethionema arabicum
Actinidia03515 Actinidia chinensis
Actinidia29415 Actinidia chinensis
Ah.04g150090 Amaranthus hybridus
Ah.04g150300 Amaranthus hybridus
Ah.04g150320 Amaranthus hybridus
Ah.13g077460 Amaranthus hybridus
AL6G13820 Arabidopsis lyrata
Aqoxy6G00755 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.132YY9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ANJF9J Arachis hypogaea
AT5G04200 Arabidopsis thaliana
ATR1096G156 Amborella trichopoda
Atru.chr1.1089 Acer truncatum
Atru.chr10.690 Acer truncatum
Atru.chr10.812 Acer truncatum
Atru.chr10.823 Acer truncatum
AUR62020971 Chenopodium quinoa
AUR62020974 Chenopodium quinoa
AUR62043198 Chenopodium quinoa
AUR62043201 Chenopodium quinoa
BcaB05g21769 Brassica carinata
BcaC03g12951 Brassica carinata
BcaC06g32124 Brassica carinata
BolC2t06141H Brassica oleracea
BolC9t60005H Brassica oleracea
BraA02t04804Z Brassica rapa
BraA10t45238Z Brassica rapa
C02p01840 Brassica napus
C09p72650 Brassica napus
CAN.G128.126 Capsicum annuum
CANSAT64G2247 Cannabis sativa
CARHR209060 Cardamine hirsuta
Carub.0006s0315 Capsella rubella
Ca_08330_v3 Cicer arietinum L.
Cc03_g10120 Coffea canephora
Cc03_g10140 Coffea canephora
Cc06_g21200 Coffea canephora
Cfa019903 Carpinus fangiana
Ciclev10012209m.g Citrus clementina
CiPaw.09G161600 Carya illinoinensis
ClCG04G005030 Citrullus lanatus
COL.COLO4_06029 Corchorus olitorius
COL.COLO4_06030 Corchorus olitorius
Cpa.g.sc33.175 Carica papaya
CsaV3_4G028990 Cucumis sativus L.
DCAR_013519 Daucus carota
Dinv37305 Davidia involucrata
Dinv40579 Davidia involucrata
Duzib106G0294 Durio zibethinus
ECA236G3306 Erigeron canadensis
EL10Ac3g07371 Beta vulgaris
EL10Ac3g07374 Beta vulgaris
Eucgr.A02174 Eucalyptus grandis
FAN11G1135 Fragaria x ananassa
FAN21G3122 Fragaria x ananassa
FAN25G1026 Fragaria x ananassa
FvH4_3g29720 Fragaria vesca
Glyma.19G122300 Glycine max
Gohir.A06G172802 Gossypium hirsutum
Gohir.A06G172806 Gossypium hirsutum
Gohir.A06G172900 Gossypium hirsutum
Gohir.A06G172902 Gossypium hirsutum
Gohir.A06G173700 Gossypium hirsutum
Gohir.D06G182000 Gossypium hirsutum
Gohir.D06G182150 Gossypium hirsutum
Gohir.D06G182200 Gossypium hirsutum
Gohir.D06G182300 Gossypium hirsutum
Gohir.D06G182333 Gossypium hirsutum
Gohir.D06G182366 Gossypium hirsutum
Gohir.D06G182400 Gossypium hirsutum
Gohir.D06G182450 Gossypium hirsutum
Gohir.D06G182500 Gossypium hirsutum
Gohir.D06G182566 Gossypium hirsutum
Gohir.D06G183700 Gossypium hirsutum
Gohir.D06G183733 Gossypium hirsutum
Gorai.010G213400 Gossypium raimondii
Gorai.010G213500 Gossypium raimondii
Gorai.010G213600 Gossypium raimondii
Gorai.010G213700 Gossypium raimondii
Gorai.010G213800 Gossypium raimondii
Gorai.010G213900 Gossypium raimondii
Gorai.010G214900 Gossypium raimondii
Gorai.010G215000 Gossypium raimondii
GSVIVG01025829001 Vitis vinifera
HanXRQChr06g0182201 Helianthus annuus
HanXRQChr11g0331721 Helianthus annuus
Haze_20348 Corylus avellana
HPP92_011317 Vanilla planifolia
Hund24487 Selenicereus undatus
Lalb_Chr14g0365201 Lupinus albus
Lj1g0008220 Lotus japonicus
Lj1g0026160 Lotus japonicus
Lj4A828T49 Lonicera japonica
Lsat_1_v5_gn_8_101661 Lactuca sativa
Manes.15G176200 Manihot esculenta
Manes.15G176224 Manihot esculenta
Manes.S095320 Manihot esculenta
MBI13_g28782_MAGBIO Magnolia biondii
MBI13_g29623_MAGBIO Magnolia biondii
MBI13_g30253_MAGBIO Magnolia biondii
MBI13_g31584_MAGBIO Magnolia biondii
MBI13_g42914_MAGBIO Magnolia biondii
MBI13_g42915_MAGBIO Magnolia biondii
MBI13_g43866_MAGBIO Magnolia biondii
MBI13_g44206_MAGBIO Magnolia biondii
MBI13_g44209_MAGBIO Magnolia biondii
MD03G1136900 Malus domestica
Medtr7g088035 Medicago truncatula
MELO3C019168.2 Cucumis melo
Migut.K00191 Erythranthe guttata
Migut.K00193 Erythranthe guttata
Migut.K00195 Erythranthe guttata
Migut.K00196 Erythranthe guttata
Migut.K00198 Erythranthe guttata
Migut.K00206 Erythranthe guttata
Migut.K00207 Erythranthe guttata
Migut.K00208 Erythranthe guttata
Migut.K00209 Erythranthe guttata
Migut.K00210 Erythranthe guttata
MSTRG.26200 Avicennia marina
Nitab4.5_0000613g0210 Nicotiana tabacum
Nitab4.5_0003217g0010 Nicotiana tabacum
Nn3g16237 Nelumbo nucifera
Nn4g26447 Nelumbo nucifera
Nn5g26938 Nelumbo nucifera
Nn6g34141 Nelumbo nucifera
Nn7g37201 Nelumbo nucifera
Oeu032952.2 Olea europaea
Os11g0134700 Oryza sativa ssp. japonica
Peaxi162Scf00698g00416 Petunia axillaris
PGR042G3174 Punica granatum
PGSC0003DMG400028207 Solanum tuberosum
Phvul.001G101400 Phaseolus vulgaris
Potri.006G026500 Populus trichocarpa
Potri.016G024500 Populus trichocarpa
Prupe.6G122000 Prunus persica
Psat3g083680 Pisum sativum
PSO675G3833 Papaver somniferum
QL07p015400 Quercus lobata
RcHm_v2.0_Chr5g0055101 Rosa chinensis
Rhsim04G0135200 Rhododendron simsii
Sabra06G0019600 Salix brachista
Sabra16G0030400 Salix brachista
SalBow1G2623 Salvia bowleyana
Sc13g0000720 Simmondsia chinensis
Sc19g0007800 Simmondsia chinensis
Sed0009784 Sechium edule
SEGI_15007 Sequoiadendron giganteum
SEGI_16717 Sequoiadendron giganteum
SEGI_30564 Sequoiadendron giganteum
SEGI_38757 Sequoiadendron giganteum
SGA_v2.0_scaffold123G33484 Striga asiatica
SGA_v2.0_scaffold123G33488 Striga asiatica
SGA_v2.0_scaffold123G33491 Striga asiatica
Solyc10g081300.1 Solanum lycopersicum
Sopen10g031800 Solanum pennellii
Sp6g38550 Schrenkiella parvula
TAR623G1069 Trochodendron aralioides
THA.LOC104826893 Tarenaya hassleriana
Thecc.10G138200 Theobroma cacao
Thecc.10G138400 Theobroma cacao
Thhalv10014106m.g Eutrema salsugineum
TPR.G23692 Trifolium pratense
TWI53G1578 Tripterygium wilfordii
vmacro08820 Vaccinium macrocarpon
vmacro08821 Vaccinium macrocarpon
VMungo1383G2405 Vigna mungo
Zm00001eb196150 Zea mays

User provided reference genes

Program Settings