Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p37100 Brassica napus
A05p32580 Brassica napus
Aa31LG8G4180 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.498 Anthoceros agrestis
Actinidia18481 Actinidia chinensis
Actinidia31572 Actinidia chinensis
Actinidia31580 Actinidia chinensis
Actinidia31581 Actinidia chinensis
Ah.07g203890 Amaranthus hybridus
AL3G30230 Arabidopsis lyrata
AL947U10010 Arabidopsis lyrata
Aqoxy2G02629 Aquilegia oxysepala
Aqoxy5G03355 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.CPQB8S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J04KK2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KT7QUA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NSV5VW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R130QB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YUC3W2 Arachis hypogaea
AT3G17205 Arabidopsis thaliana
ATR0693G276 Amborella trichopoda
Atru.chr4.3105 Acer truncatum
AUR62002590 Chenopodium quinoa
AUR62030014 Chenopodium quinoa
BcaB04g20855 Brassica carinata
BcaB06g25812 Brassica carinata
BcaC05g28820 Brassica carinata
BcaC09g48678 Brassica carinata
BolC1t04670H Brassica oleracea
BolC5t33665H Brassica oleracea
BolC5t33666H Brassica oleracea
BraA01t03772Z Brassica rapa
BraA05t22082Z Brassica rapa
C01p47020 Brassica napus
C05p49250 Brassica napus
CAN.G170.17 Capsicum annuum
CAN.G170.20 Capsicum annuum
CAN.G3221.1 Capsicum annuum
CANSAT78G0170 Cannabis sativa
CARHR092470 Cardamine hirsuta
Carub.0003s1696 Capsella rubella
Ca_00947_v3 Cicer arietinum L.
Ca_00953_v3 Cicer arietinum L.
Cc03_g00480 Coffea canephora
CDE05G1257 Ceratophyllum demersum
CDE11G0596 Ceratophyllum demersum
Ciclev10004231m.g Citrus clementina
CiPaw.01G133500 Carya illinoinensis
ClCG06G004370 Citrullus lanatus
COL.COLO4_34559 Corchorus olitorius
Cpa.g.sc146.73 Carica papaya
Cre06.g280300 Chlamydomonas reinhardtii
CsaV3_5G020800 Cucumis sativus L.
CsaV3_6G000010 Cucumis sativus L.
CsaV3_6G020210 Cucumis sativus L.
CsaV3_6G021240 Cucumis sativus L.
CsaV3_6G022750 Cucumis sativus L.
CsaV3_6G023770 Cucumis sativus L.
CsaV3_6G026310 Cucumis sativus L.
CsaV3_6G026330 Cucumis sativus L.
CsaV3_6G027360 Cucumis sativus L.
CsaV3_UNG090710 Cucumis sativus L.
CSS0019056 Camellia sinensis var. sinensis
CSS0023043 Camellia sinensis var. sinensis
DCAR_002525 Daucus carota
Dinv15128 Davidia involucrata
Duzib052G0753 Durio zibethinus
Duzib151G0433 Durio zibethinus
Duzib212G0904 Durio zibethinus
ECA233G3437 Erigeron canadensis
EL10Ac3g06290 Beta vulgaris
Eucgr.B03986 Eucalyptus grandis
FAN07G0175 Fragaria x ananassa
FAN17G1353 Fragaria x ananassa
FvH4_4g20760 Fragaria vesca
Glyma.07G235800 Glycine max
Glyma.09G032001 Glycine max
Glyma.15G137000 Glycine max
Glyma.17G037600 Glycine max
Gohir.A09G241400 Gossypium hirsutum
Gohir.A10G175700 Gossypium hirsutum
Gohir.D09G242100 Gossypium hirsutum
Gohir.D10G182300 Gossypium hirsutum
Gorai.006G265700 Gossypium raimondii
Gorai.011G204200 Gossypium raimondii
GSVIVG01034942001 Vitis vinifera
HanXRQChr06g0182841 Helianthus annuus
Haze_00834 Corylus avellana
Hma1.2p1_1096F.1_g256630 Hydrangea macrophylla
HPP92_015992 Vanilla planifolia
HPP92_015995 Vanilla planifolia
Hund12236 Selenicereus undatus
Hund28791 Selenicereus undatus
Hund28792 Selenicereus undatus
Lalb_Chr15g0089041 Lupinus albus
Lj3A836G20 Lonicera japonica
Lj3A836G21 Lonicera japonica
Lj6g0013861 Lotus japonicus
Lsat_1_v5_gn_6_107301 Lactuca sativa
Lsat_1_v5_gn_6_70541 Lactuca sativa
Manes.03G208600 Manihot esculenta
Mapoly0140s0005 Marchantia polymorpha
MBI18_g27389_MAGBIO Magnolia biondii
MCO16G275 Micromonas commoda
MD13G1148100 Malus domestica
MD16G1147900 Malus domestica
MD16G1148200 Malus domestica
MD16G1155700 Malus domestica
MD17G1270000 Malus domestica
Medtr2g033040 Medicago truncatula
Medtr2g033055 Medicago truncatula
Medtr2g033080 Medicago truncatula
MELO3C021252.2 Cucumis melo
Migut.G00024 Erythranthe guttata
MSTRG.10174 Avicennia marina
Nitab4.5_0001334g0030 Nicotiana tabacum
Nitab4.5_0001334g0040 Nicotiana tabacum
Nitab4.5_0005403g0020 Nicotiana tabacum
Nn3g21805 Nelumbo nucifera
Oeu052157.1 Olea europaea
Os05g0159000 Oryza sativa ssp. japonica
Peaxi162Scf00126g01514 Petunia axillaris
PGR031G1986 Punica granatum
Phvul.003G118500 Phaseolus vulgaris
Phvul.006G120900 Phaseolus vulgaris
Potri.008G101300 Populus trichocarpa
Potri.010G150000 Populus trichocarpa
Pp3c17_16520 Physcomitrium patens
PRCOL_00004930 Prasinoderma coloniale
Prupe.1G111600 Prunus persica
Psat1g162680 Pisum sativum
Psat4g128000 Pisum sativum
Psat7g185600 Pisum sativum
Psat7g185760 Pisum sativum
PSO210G6954 Papaver somniferum
PSO761G0701 Papaver somniferum
QL06p013303 Quercus lobata
RcHm_v2.0_Chr4g0426201 Rosa chinensis
Rhsim04G0243000 Rhododendron simsii
Sabra08G0076600 Salix brachista
Sabra10G0115600 Salix brachista
SalBow8G1635 Salvia bowleyana
SalBow8G3583 Salvia bowleyana
Sc25g0001570 Simmondsia chinensis
Sed0003045 Sechium edule
Sed0005984 Sechium edule
SEGI_11758 Sequoiadendron giganteum
SEGI_11859 Sequoiadendron giganteum
SGA_v2.0_scaffold157G37358 Striga asiatica
SGA_v2.0_scaffold64G22058 Striga asiatica
SHI00089 Sapria himalayana
SHI00090 Sapria himalayana
SHI00091 Sapria himalayana
SHI00092 Sapria himalayana
SMO165G0153 Selaginella moellendorffii
Solyc01g057900.3 Solanum lycopersicum
Sopen01g023220 Solanum pennellii
Sp3g15400 Schrenkiella parvula
TAR362G0993 Trochodendron aralioides
TAR633G1529 Trochodendron aralioides
THA.LOC104820321 Tarenaya hassleriana
Thecc.04G307300 Theobroma cacao
Thhalv10019984m.g Eutrema salsugineum
TPR.G10108 Trifolium pratense
TPR.G34381 Trifolium pratense
TWI53G1735 Tripterygium wilfordii
unitig_88.g27699 Utricularia gibba
vmacro07974 Vaccinium macrocarpon
VMungo1215G1053 Vigna mungo
Zm00001eb282520 Zea mays
Zm00001eb412620 Zea mays

User provided reference genes

Program Settings