Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p01780 Brassica napus
A03p37310 Brassica napus
A05p37520 Brassica napus
Aa31LG3G5320 Aethionema arabicum
Aa31LG5G8530 Aethionema arabicum
Aa31sc2712G10 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2607 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.2612 Anthoceros agrestis
Actinidia06356 Actinidia chinensis
Actinidia22468 Actinidia chinensis
Ah.04g164010 Amaranthus hybridus
AL3G23390 Arabidopsis lyrata
Aqoxy6G02048 Aquilegia oxysepala
Aqoxy6G02051 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.H62ZJF Arachis hypogaea
AT3G11830 Arabidopsis thaliana
ATR0099G014 Amborella trichopoda
ATR0099G017 Amborella trichopoda
ATR0099G041 Amborella trichopoda
ATR0099G056 Amborella trichopoda
ATR0408G001 Amborella trichopoda
ATR0638G001 Amborella trichopoda
ATR0661G304 Amborella trichopoda
ATR1195G001 Amborella trichopoda
Atru.chr3.2916 Acer truncatum
Atru.chr3.2917 Acer truncatum
AUR62013959 Chenopodium quinoa
AUR62019654 Chenopodium quinoa
BcaB04g18663 Brassica carinata
BcaB04g21115 Brassica carinata
BcaB06g25572 Brassica carinata
BcaC01g04077 Brassica carinata
BcaC05g29321 Brassica carinata
BcaC09g48192 Brassica carinata
BolC1t05287H Brassica oleracea
BolC3t16793H Brassica oleracea
BolC5t34275H Brassica oleracea
BraA01t04158Z Brassica rapa
BraA03t12891Z Brassica rapa
BraA04t18261Z Brassica rapa
BraA05t22550Z Brassica rapa
C03p45300 Brassica napus
C05p56080 Brassica napus
CAN.G199.51 Capsicum annuum
CANSAT35G1978 Cannabis sativa
CARHR086380 Cardamine hirsuta
Carub.0003s1118 Capsella rubella
CBR_g42151 Chara braunii
Cc00_g07390 Coffea canephora
Cc00_g07900 Coffea canephora
Cc00_g15470 Coffea canephora
Cc11_g01300 Coffea canephora
CDE02G3738 Ceratophyllum demersum
CDE06G0515 Ceratophyllum demersum
Cfa025880 Carpinus fangiana
Ciclev10014771m.g Citrus clementina
CiPaw.14G092200 Carya illinoinensis
ClCG03G014240 Citrullus lanatus
COL.COLO4_14011 Corchorus olitorius
Cpa.g.sc103.86 Carica papaya
Cre01.g026550 Chlamydomonas reinhardtii
CsaV3_1G041990 Cucumis sativus L.
CSS0003568 Camellia sinensis var. sinensis
CSS0017916 Camellia sinensis var. sinensis
DCAR_023796 Daucus carota
DCAR_027486 Daucus carota
Dinv32114 Davidia involucrata
Dinv32841 Davidia involucrata
Duzib147G1120 Durio zibethinus
Duzib187G1092 Durio zibethinus
Duzib264G0906 Durio zibethinus
ECA238G3358 Erigeron canadensis
EL10Ac4g08419 Beta vulgaris
Eucgr.J00618 Eucalyptus grandis
FAN11G3227 Fragaria x ananassa
FAN16G1090 Fragaria x ananassa
FAN16G3564 Fragaria x ananassa
FAN25G3467 Fragaria x ananassa
FvH4_3g27240 Fragaria vesca
Glyma.02G273200 Glycine max
Glyma.14G043400 Glycine max
Gohir.A11G230300 Gossypium hirsutum
Gohir.A12G001300 Gossypium hirsutum
Gohir.D11G229500 Gossypium hirsutum
Gohir.D12G001100 Gossypium hirsutum
Gorai.003G068300 Gossypium raimondii
Gorai.008G000400 Gossypium raimondii
GSVIVG01002278001 Vitis vinifera
HanXRQChr12g0378161 Helianthus annuus
HanXRQChr15g0468701 Helianthus annuus
Haze_23638 Corylus avellana
Haze_26775 Corylus avellana
Hma1.2p1_1466F.1_g285420 Hydrangea macrophylla
HPP92_007029 Vanilla planifolia
HPP92_007072 Vanilla planifolia
Hund02336 Selenicereus undatus
Lalb_Chr04g0249751 Lupinus albus
Lalb_Chr10g0105841 Lupinus albus
Lj2A907T33 Lonicera japonica
LjContig00564g0022207 Lotus japonicus
Lsat_1_v5_gn_2_11161 Lactuca sativa
Lsat_1_v5_gn_4_47521 Lactuca sativa
Lsat_1_v5_gn_5_64940 Lactuca sativa
Lsat_1_v5_gn_7_41860 Lactuca sativa
Manes.11G109600 Manihot esculenta
Mapoly0156s0015 Marchantia polymorpha
MBI08_g21308_MAGBIO Magnolia biondii
MCO06G165 Micromonas commoda
MD03G1164100 Malus domestica
Medtr5g087560 Medicago truncatula
MELO3C015615.2 Cucumis melo
Migut.A00285 Erythranthe guttata
Migut.E01490 Erythranthe guttata
MSTRG.11745 Avicennia marina
Nitab4.5_0003976g0060 Nicotiana tabacum
Nitab4.5_0005873g0040 Nicotiana tabacum
Nn6g31931 Nelumbo nucifera
Oeu031561.1 Olea europaea
Os06g0687700 Oryza sativa ssp. japonica
Peaxi162Scf00038g02039 Petunia axillaris
Peaxi162Scf00275g00008 Petunia axillaris
PGR119G0569 Punica granatum
PGSC0003DMG400026124 Solanum tuberosum
Phvul.008G208800 Phaseolus vulgaris
Potri.004G195100 Populus trichocarpa
Potri.004G195300 Populus trichocarpa
Potri.009G157400 Populus trichocarpa
Pp3c15_8230 Physcomitrium patens
Pp3c9_14010 Physcomitrium patens
PRCOL_00005497 Prasinoderma coloniale
Prupe.6G154400 Prunus persica
Psat0s921g0240 Pisum sativum
PSO541G3784 Papaver somniferum
PSO675G7679 Papaver somniferum
QL01p020501 Quercus lobata
RcHm_v2.0_Chr2g0128841 Rosa chinensis
RcHm_v2.0_Chr5g0049871 Rosa chinensis
Rhsim05G0064500 Rhododendron simsii
Sabra04G0132500 Salix brachista
Sabra09G0123000 Salix brachista
SalBow8G4259 Salvia bowleyana
SalBow8G4293 Salvia bowleyana
Sc03g0004270 Simmondsia chinensis
Sed0013756 Sechium edule
Sed0019588 Sechium edule
SEGI_21483 Sequoiadendron giganteum
SGA_v2.0_scaffold169G38626 Striga asiatica
SGA_v2.0_scaffold4G02195 Striga asiatica
SHI25343 Sapria himalayana
SMO347G0357 Selaginella moellendorffii
Solyc06g065520.3 Solanum lycopersicum
Sopen06g024160 Solanum pennellii
Sp3g10060 Schrenkiella parvula
TAR381G1107 Trochodendron aralioides
TAR625G0442 Trochodendron aralioides
TAR628G0924 Trochodendron aralioides
TAR628G1175 Trochodendron aralioides
THA.LOC104816967 Tarenaya hassleriana
THA.LOC104826479 Tarenaya hassleriana
Thecc.01G126500 Theobroma cacao
Thhalv10020422m.g Eutrema salsugineum
TPR.G11653 Trifolium pratense
TWI31G0144 Tripterygium wilfordii
TWI75G0864 Tripterygium wilfordii
unitig_26.g9787 Utricularia gibba
unitig_749.g13821 Utricularia gibba
vmacro08485 Vaccinium macrocarpon
VMungo0647G0629 Vigna mungo
Zm00001eb045220 Zea mays
Zm00001eb207780 Zea mays
Zm00001eb424810 Zea mays

User provided reference genes

Program Settings