Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p15050 Brassica napus
A06p08360 Brassica napus
A07p34880 Brassica napus
A08p32310 Brassica napus
Aa31LG1G1560 Aethionema arabicum
Aa31sc366G10 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1523 Anthoceros agrestis
Actinidia14896 Actinidia chinensis
Ah.03g137600 Amaranthus hybridus
AL1G25160 Arabidopsis lyrata
AL2G27340 Arabidopsis lyrata
Aqoxy3G00286 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1XFG43 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A2D7P4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U1U6XH Arachis hypogaea
AT1G13400 Arabidopsis thaliana
AT1G68480 Arabidopsis thaliana
ATR1125G037 Amborella trichopoda
BcaB03g13142 Brassica carinata
BcaB03g15826 Brassica carinata
BcaB05g24386 Brassica carinata
BcaC03g14956 Brassica carinata
BcaC05g25048 Brassica carinata
BcaC07g38691 Brassica carinata
BcaC08g46276 Brassica carinata
BolC2t08567H Brassica oleracea
BolC5t29729H Brassica oleracea
BolC6t39275H Brassica oleracea
BolC8t49237H Brassica oleracea
BraA02t06569Z Brassica rapa
BraA06t24033Z Brassica rapa
BraA08t35155Z Brassica rapa
C02p24750 Brassica napus
C05p09900 Brassica napus
C06p41480 Brassica napus
C08p16160 Brassica napus
CAN.G610.78 Capsicum annuum
CANSAT01G1980 Cannabis sativa
CARHR013770 Cardamine hirsuta
CARHR061260 Cardamine hirsuta
Carub.0001s1311 Capsella rubella
Carub.0002s1499 Capsella rubella
Ca_03055_v3 Cicer arietinum L.
Ca_11169_v3 Cicer arietinum L.
Cc11_g10070 Coffea canephora
CDE12G0443 Ceratophyllum demersum
Cfa018590 Carpinus fangiana
Ciclev10018307m.g Citrus clementina
CiPaw.15G085900 Carya illinoinensis
CiPaw.16G065300 Carya illinoinensis
ClCG03G009600 Citrullus lanatus
COL.COLO4_03992 Corchorus olitorius
Cpa.g.sc350.1 Carica papaya
CsaV3_5G023110 Cucumis sativus L.
CSS0039482 Camellia sinensis var. sinensis
CSS0040364 Camellia sinensis var. sinensis
DCAR_007247 Daucus carota
DCAR_026735 Daucus carota
Dinv21080 Davidia involucrata
Dinv31634 Davidia involucrata
Duzib248G0829 Durio zibethinus
Duzib251G0145 Durio zibethinus
Duzib268G1624 Durio zibethinus
ECA233G4816 Erigeron canadensis
ECA233G4891 Erigeron canadensis
ECA246G5171 Erigeron canadensis
Eucgr.G02316 Eucalyptus grandis
FAN07G2244 Fragaria x ananassa
FAN12G0145 Fragaria x ananassa
FAN12G0921 Fragaria x ananassa
FAN22G2099 Fragaria x ananassa
FvH4_4g27300 Fragaria vesca
Glyma.10G273800 Glycine max
Glyma.20G116200 Glycine max
Gohir.A03G147300 Gossypium hirsutum
Gohir.A04G098200 Gossypium hirsutum
Gohir.D02G170500 Gossypium hirsutum
Gohir.D04G137875 Gossypium hirsutum
Gorai.005G191500 Gossypium raimondii
Gorai.012G122600 Gossypium raimondii
GSVIVG01011890001 Vitis vinifera
HanXRQChr08g0213911 Helianthus annuus
HanXRQChr09g0252701 Helianthus annuus
Haze_17490 Corylus avellana
HPP92_004806 Vanilla planifolia
HPP92_004807 Vanilla planifolia
HPP92_004810 Vanilla planifolia
Lalb_Chr02g0145931 Lupinus albus
Lalb_Chr10g0100051 Lupinus albus
Lalb_Chr21g0308891 Lupinus albus
Lj2g0014688 Lotus japonicus
Lj5g0020149 Lotus japonicus
Lj5g0023256 Lotus japonicus
Lj6C757T7 Lonicera japonica
Lsat_1_v5_gn_3_59041 Lactuca sativa
Lsat_1_v5_gn_8_40481 Lactuca sativa
Lsat_1_v5_gn_8_41281 Lactuca sativa
Manes.06G067400 Manihot esculenta
Manes.14G103000 Manihot esculenta
MD13G1040900 Malus domestica
MD16G1042200 Malus domestica
Medtr1g110710 Medicago truncatula
Medtr1g110740 Medicago truncatula
MELO3C003021.2 Cucumis melo
Migut.E00347 Erythranthe guttata
Migut.L01390 Erythranthe guttata
MSTRG.13535 Avicennia marina
MSTRG.844 Avicennia marina
Nitab4.5_0000791g0080 Nicotiana tabacum
Nitab4.5_0003373g0030 Nicotiana tabacum
Nn3g17856 Nelumbo nucifera
Nn4g23857 Nelumbo nucifera
Oeu034240.1 Olea europaea
Oeu043592.1 Olea europaea
Os01g0129200 Oryza sativa ssp. japonica
Peaxi162Scf00382g00826 Petunia axillaris
PGR119G1213 Punica granatum
Phvul.003G031000 Phaseolus vulgaris
Phvul.007G027700 Phaseolus vulgaris
Potri.008G121200 Populus trichocarpa
Potri.010G124200 Populus trichocarpa
Pp3c20_10790 Physcomitrium patens
Pp3c23_2190 Physcomitrium patens
Pp3c23_800 Physcomitrium patens
Pp3c23_861 Physcomitrium patens
Pp3c23_960 Physcomitrium patens
Pp3c3_21050 Physcomitrium patens
Prupe.1G311900 Prunus persica
Psat6g226920 Pisum sativum
Psat6g227440 Pisum sativum
PSO063G6205 Papaver somniferum
PSO782G4509 Papaver somniferum
QL01p041642 Quercus lobata
RcHm_v2.0_Chr4g0435091 Rosa chinensis
Rhsim09G0107600 Rhododendron simsii
Sabra08G0091900 Salix brachista
Sabra10G0094200 Salix brachista
SalBow8G0349 Salvia bowleyana
SalBow8G0756 Salvia bowleyana
Sc04g0006360 Simmondsia chinensis
Sed0004295 Sechium edule
Sed0009095 Sechium edule
SEGI_26835 Sequoiadendron giganteum
SGA_v2.0_scaffold36G14538 Striga asiatica
SHI16201 Sapria himalayana
SMO266G0088 Selaginella moellendorffii
SMO288G0011 Selaginella moellendorffii
Solyc05g009380.4 Solanum lycopersicum
Sopen05g005180 Solanum pennellii
Sp1g11890 Schrenkiella parvula
Sp5g23550 Schrenkiella parvula
TAR374G0469 Trochodendron aralioides
TAR622G0492 Trochodendron aralioides
THA.LOC104805006 Tarenaya hassleriana
THA.LOC104805254 Tarenaya hassleriana
THA.LOC104821930 Tarenaya hassleriana
Thecc.02G229500 Theobroma cacao
Thhalv10009343m.g Eutrema salsugineum
Thhalv10019033m.g Eutrema salsugineum
TPR.G18805 Trifolium pratense
TPR.G18823 Trifolium pratense
TPR.G971 Trifolium pratense
TWI31G0276 Tripterygium wilfordii
TWI75G1885 Tripterygium wilfordii
unitig_22.g6557 Utricularia gibba
unitig_747.g21201 Utricularia gibba
unitig_8.g3254 Utricularia gibba
vmacro10561 Vaccinium macrocarpon
VMungo0720G2589 Vigna mungo
VMungo1215G3079 Vigna mungo
Zm00001eb125440 Zea mays
Zm00001eb335100 Zea mays

User provided reference genes

Program Settings