Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p46870 Brassica napus
A09p07270 Brassica napus
Aa31LG11G2120 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5257 Anthoceros agrestis
Actinidia12325 Actinidia chinensis
Actinidia19010 Actinidia chinensis
Actinidia28633 Actinidia chinensis
Actinidia33247 Actinidia chinensis
Ah.03g139090 Amaranthus hybridus
AL1G25740 Arabidopsis lyrata
AL8G37900 Arabidopsis lyrata
Aqoxy3G03571 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.V223R1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y3WTJM Arachis hypogaea
AT1G13910 Arabidopsis thaliana
AT5G61240 Arabidopsis thaliana
ATR0064G031 Amborella trichopoda
AUR62003123 Chenopodium quinoa
AUR62007943 Chenopodium quinoa
BcaC04g23458 Brassica carinata
BcaC06g33170 Brassica carinata
BcaC06g33219 Brassica carinata
BolC7t45015H Brassica oleracea
BraA02t09094Z Brassica rapa
BraA03t13807Z Brassica rapa
BraA09t36376Z Brassica rapa
C07p44920 Brassica napus
C09p08130 Brassica napus
CAN.G541.15 Capsicum annuum
CANSAT80G0608 Cannabis sativa
CANSAT80G1362 Cannabis sativa
CARHR014280 Cardamine hirsuta
CARHR274990 Cardamine hirsuta
Carub.0001s1361 Capsella rubella
Carub.0008s2191 Capsella rubella
Ca_04940_v3 Cicer arietinum L.
Cc11_g12270 Coffea canephora
CDE04G0854 Ceratophyllum demersum
CDE07G1785 Ceratophyllum demersum
Cfa008900 Carpinus fangiana
Ciclev10021138m.g Citrus clementina
CiPaw.05G127300 Carya illinoinensis
CiPaw.06G090700 Carya illinoinensis
ClCG05G023830 Citrullus lanatus
ClCG09G022210 Citrullus lanatus
COL.COLO4_27919 Corchorus olitorius
COL.COLO4_36892 Corchorus olitorius
Cpa.g.sc1.101 Carica papaya
Cpa.g.sc94.5 Carica papaya
CsaV3_5G025510 Cucumis sativus L.
CsaV3_5G033180 Cucumis sativus L.
CSS0000444 Camellia sinensis var. sinensis
CSS0008157 Camellia sinensis var. sinensis
CSS0038990 Camellia sinensis var. sinensis
DCAR_005254 Daucus carota
DCAR_007183 Daucus carota
DCAR_016919 Daucus carota
Dinv16710 Davidia involucrata
Dinv34089 Davidia involucrata
Dinv38780 Davidia involucrata
Duzib205G0623 Durio zibethinus
Duzib251G0914 Durio zibethinus
ECA233G2546 Erigeron canadensis
Eucgr.B03173 Eucalyptus grandis
FAN07G2601 Fragaria x ananassa
FAN12G0947 Fragaria x ananassa
FAN17G0137 Fragaria x ananassa
FAN22G1318 Fragaria x ananassa
FvH4_4g30420 Fragaria vesca
Glyma.01G056300 Glycine max
Glyma.02G114800 Glycine max
Gohir.A03G103400 Gossypium hirsutum
Gohir.A07G069400 Gossypium hirsutum
Gohir.A12G180500 Gossypium hirsutum
Gohir.D02G128600 Gossypium hirsutum
Gohir.D07G073800 Gossypium hirsutum
Gohir.D12G183125 Gossypium hirsutum
Gohir.D12G183200 Gossypium hirsutum
Gorai.001G078000 Gossypium raimondii
Gorai.005G144300 Gossypium raimondii
Gorai.008G196500 Gossypium raimondii
GSVIVG01012205001 Vitis vinifera
HanXRQChr08g0211521 Helianthus annuus
HanXRQChr12g0379561 Helianthus annuus
Haze_11929 Corylus avellana
Hma1.2p1_0322F.1_g124910 Hydrangea macrophylla
Hma1.2p1_0357F.1_g134490 Hydrangea macrophylla
HPP92_007743 Vanilla planifolia
Hund05853 Selenicereus undatus
Hund14089 Selenicereus undatus
Hund25193 Selenicereus undatus
Lalb_Chr10g0098641 Lupinus albus
Lalb_Chr17g0341071 Lupinus albus
Lj2g0008638 Lotus japonicus
Lj3A1031T31 Lonicera japonica
Lj6A782T110 Lonicera japonica
Lsat_1_v5_gn_4_12041 Lactuca sativa
Lsat_1_v5_gn_8_48161 Lactuca sativa
Manes.01G029800 Manihot esculenta
Manes.05G108200 Manihot esculenta
MBI16_g16360_MAGBIO Magnolia biondii
MD13G1065200 Malus domestica
MD16G1063500 Malus domestica
Medtr5g043800 Medicago truncatula
MELO3C002928.2 Cucumis melo
MELO3C012139.2 Cucumis melo
Migut.E00057 Erythranthe guttata
Migut.L01211 Erythranthe guttata
MSTRG.738 Avicennia marina
MSTRG.7761 Avicennia marina
Nitab4.5_0000720g0010 Nicotiana tabacum
Nitab4.5_0002832g0050 Nicotiana tabacum
Nitab4.5_0004304g0080 Nicotiana tabacum
Nitab4.5_0017073g0010 Nicotiana tabacum
Nn3g17386 Nelumbo nucifera
Nn4g23361 Nelumbo nucifera
Oeu027875.1 Olea europaea
Oeu031422.1 Olea europaea
Os03g0211900 Oryza sativa ssp. japonica
Peaxi162Scf00097g00610 Petunia axillaris
Peaxi162Scf00314g00122 Petunia axillaris
PGR102G2931 Punica granatum
PGSC0003DMG400004190 Solanum tuberosum
Phvul.002G081300 Phaseolus vulgaris
Potri.008G093400 Populus trichocarpa
Potri.010G160700 Populus trichocarpa
Prupe.1G283000 Prunus persica
Psat2g128600 Pisum sativum
PSO063G1864 Papaver somniferum
PSO384G1483 Papaver somniferum
QL03p070738 Quercus lobata
QL03p071051 Quercus lobata
RcHm_v2.0_Chr3g0459551 Rosa chinensis
RcHm_v2.0_Chr4g0438711 Rosa chinensis
Rhsim12G0134600 Rhododendron simsii
Sabra08G0070200 Salix brachista
Sabra10G0122300 Salix brachista
SalBow2G0317 Salvia bowleyana
SalBow2G2522 Salvia bowleyana
SalBow2G2568 Salvia bowleyana
Sc11g0002320 Simmondsia chinensis
Sed0012304 Sechium edule
Sed0016795 Sechium edule
SEGI_02286 Sequoiadendron giganteum
SEGI_40768 Sequoiadendron giganteum
SGA_v2.0_scaffold16G07765 Striga asiatica
SGA_v2.0_scaffold36G14436 Striga asiatica
SHI26375 Sapria himalayana
SMO307G0068 Selaginella moellendorffii
Solyc01g011040.3 Solanum lycopersicum
Sopen01g022300 Solanum pennellii
Sopen01g034040 Solanum pennellii
Sopen05g021540 Solanum pennellii
Sopen05g021560 Solanum pennellii
Sp1g12050 Schrenkiella parvula
Sp2g24470 Schrenkiella parvula
TAR622G0005 Trochodendron aralioides
THA.LOC104801343 Tarenaya hassleriana
THA.LOC104818332 Tarenaya hassleriana
THA.LOC104824065 Tarenaya hassleriana
Thecc.02G335000 Theobroma cacao
Thecc.03G096900 Theobroma cacao
Thhalv10004587m.g Eutrema salsugineum
Thhalv10008166m.g Eutrema salsugineum
TPR.G24438 Trifolium pratense
TWI75G1095 Tripterygium wilfordii
TWI79G0662 Tripterygium wilfordii
vmacro01326 Vaccinium macrocarpon
vmacro16373 Vaccinium macrocarpon
vmacro23251 Vaccinium macrocarpon
VMungo1215G2610 Vigna mungo
Zm00001eb008460 Zea mays

User provided reference genes

Program Settings