Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p25270 Brassica napus
A09p26110 Brassica napus
Aa31LG9G9700 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3731 Anthoceros agrestis
Actinidia04354 Actinidia chinensis
Actinidia11849 Actinidia chinensis
Ah.07g208390 Amaranthus hybridus
AL6G48260 Arabidopsis lyrata
Aqoxy1G02185 Aquilegia oxysepala
Aqoxy1G02187 Aquilegia oxysepala
Aqoxy226s001 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1W8BNJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G9MXMR Arachis hypogaea
AT4G04770 Arabidopsis thaliana
AT5G44316 Arabidopsis thaliana
ATR0772G029 Amborella trichopoda
Atru.chr10.2206 Acer truncatum
Atru.chr8.686 Acer truncatum
AUR62012688 Chenopodium quinoa
AUR62021968 Chenopodium quinoa
BcaB01g01836 Brassica carinata
BcaB05g23711 Brassica carinata
BcaC03g16235 Brassica carinata
BcaC04g21323 Brassica carinata
BolC2t10037H Brassica oleracea
BolC9t56149H Brassica oleracea
BraA02t07513Z Brassica rapa
BraA02t07514Z Brassica rapa
BraA09t38178Z Brassica rapa
C02p40090 Brassica napus
C09p33150 Brassica napus
CAN.G569.15 Capsicum annuum
CANSAT56G3413 Cannabis sativa
CARHR107510 Cardamine hirsuta
CARHR252770 Cardamine hirsuta
Carub.0006s3269 Capsella rubella
Ca_09479_v3 Cicer arietinum L.
CBR_g37549 Chara braunii
Cc01_g06630 Coffea canephora
CDE06G1524 Ceratophyllum demersum
CDE07G0300 Ceratophyllum demersum
Cfa007474 Carpinus fangiana
Ciclev10014785m.g Citrus clementina
CiPaw.03G033800 Carya illinoinensis
CiPaw.04G022400 Carya illinoinensis
ClCG03G004800 Citrullus lanatus
COL.COLO4_31757 Corchorus olitorius
Cpa.g.sc198.44 Carica papaya
Cre15.g643600 Chlamydomonas reinhardtii
CsaV3_1G010840 Cucumis sativus L.
CSS0008972 Camellia sinensis var. sinensis
CSS0016174 Camellia sinensis var. sinensis
CSS0026740 Camellia sinensis var. sinensis
CSS0040304 Camellia sinensis var. sinensis
CSS0041721 Camellia sinensis var. sinensis
CSS0046928 Camellia sinensis var. sinensis
DCAR_008142 Daucus carota
Dinv13883 Davidia involucrata
Duzib192G0236 Durio zibethinus
Duzib211G0221 Durio zibethinus
ECA248G0760 Erigeron canadensis
EL10Ac3g05771 Beta vulgaris
EL10Ac8g18634 Beta vulgaris
Eucgr.E04076 Eucalyptus grandis
FAN21G0289 Fragaria x ananassa
FAN25G2291 Fragaria x ananassa
FvH4_3g02300 Fragaria vesca
Glyma.13G163700 Glycine max
Glyma.17G107200 Glycine max
Gohir.A05G169500 Gossypium hirsutum
Gohir.D05G172700 Gossypium hirsutum
Gorai.009G177900 Gossypium raimondii
GSVIVG01012742001 Vitis vinifera
HanXRQChr01g0004241 Helianthus annuus
HanXRQChr11g0323581 Helianthus annuus
Haze_14623 Corylus avellana
Haze_26807 Corylus avellana
Hma1.2p1_0558F.1_g178480 Hydrangea macrophylla
HPP92_023742 Vanilla planifolia
Hund21401 Selenicereus undatus
Hund23481 Selenicereus undatus
Lalb_Chr11g0064371 Lupinus albus
Lalb_Chr23g0269471 Lupinus albus
Lj1A1229G40 Lonicera japonica
Lj5g0005763 Lotus japonicus
Lsat_1_v5_gn_1_128700 Lactuca sativa
Manes.16G008200 Manihot esculenta
Mapoly0043s0049 Marchantia polymorpha
MBI02_g22110_MAGBIO Magnolia biondii
MCO07G339 Micromonas commoda
MD05G1344000 Malus domestica
MD10G1319900 Malus domestica
Medtr7g030030 Medicago truncatula
Medtr7g038720 Medicago truncatula
Medtr8g019500 Medicago truncatula
MELO3C002463.2 Cucumis melo
Migut.M01308 Erythranthe guttata
MSTRG.15982 Avicennia marina
MSTRG.7222 Avicennia marina
Nitab4.5_0000960g0170 Nicotiana tabacum
Nitab4.5_0001990g0020 Nicotiana tabacum
Nitab4.5_0003254g0100 Nicotiana tabacum
Nitab4.5_0003343g0020 Nicotiana tabacum
Nitab4.5_0006137g0030 Nicotiana tabacum
Nitab4.5_0009691g0010 Nicotiana tabacum
Oeu002728.1 Olea europaea
Oeu033892.1 Olea europaea
Os01g0830000 Oryza sativa ssp. japonica
Peaxi162Scf00079g01510 Petunia axillaris
Peaxi162Scf00853g00314 Petunia axillaris
PGR042G1667 Punica granatum
PGSC0003DMG400005080 Solanum tuberosum
PGSC0003DMG400016484 Solanum tuberosum
Phvul.003G172700 Phaseolus vulgaris
Potri.004G016900 Populus trichocarpa
Pp3c1_9330 Physcomitrium patens
Pp3c25_3020 Physcomitrium patens
Pp3c2_37190 Physcomitrium patens
Pp3c4_7780 Physcomitrium patens
PRCOL_00000395 Prasinoderma coloniale
Prupe.4G022500 Prunus persica
Psat0s2739g0040 Pisum sativum
Psat0s2739g0120 Pisum sativum
Psat3g165680 Pisum sativum
PSO339G3293 Papaver somniferum
PSO541G4368 Papaver somniferum
PSO675G6282 Papaver somniferum
QL02p078433 Quercus lobata
RcHm_v2.0_Chr1g0332851 Rosa chinensis
RcHm_v2.0_Chr5g0003411 Rosa chinensis
RcHm_v2.0_Chr5g0003431 Rosa chinensis
RcHm_v2.0_Chr5g0003451 Rosa chinensis
RcHm_v2.0_Chr5g0003481 Rosa chinensis
RcHm_v2.0_Chr6g0297111 Rosa chinensis
Rhsim02G0109300 Rhododendron simsii
Rhsim02G0109900 Rhododendron simsii
Rhsim04G0103400 Rhododendron simsii
Sabra04G0009200 Salix brachista
SalBow8G0975 Salvia bowleyana
Sc05g0009110 Simmondsia chinensis
Sed0003265 Sechium edule
Sed0011656 Sechium edule
SEGI_39818 Sequoiadendron giganteum
SGA_v2.0_scaffold24G10311 Striga asiatica
SHI00520 Sapria himalayana
SMO118G0281 Selaginella moellendorffii
SMO347G0487 Selaginella moellendorffii
Solyc02g080440.3 Solanum lycopersicum
Solyc03g031700.4 Solanum lycopersicum
Sopen02g025130 Solanum pennellii
Sopen03g005570 Solanum pennellii
Sp6g04170 Schrenkiella parvula
TAR624G0013 Trochodendron aralioides
TAR627G0615 Trochodendron aralioides
TAR629G1093 Trochodendron aralioides
THA.LOC104813092 Tarenaya hassleriana
Thecc.06G087700 Theobroma cacao
Thecc.06G219000 Theobroma cacao
Thhalv10022515m.g Eutrema salsugineum
Thhalv10028516m.g Eutrema salsugineum
TPR.G39070 Trifolium pratense
TWI38G1857 Tripterygium wilfordii
TWI63G0549 Tripterygium wilfordii
unitig_748.g7575 Utricularia gibba
unitig_748.g7576 Utricularia gibba
vmacro09067 Vaccinium macrocarpon
vmacro09068 Vaccinium macrocarpon
vmacro10117 Vaccinium macrocarpon
vmacro15813 Vaccinium macrocarpon
VMungo0251G0494 Vigna mungo
VMungo1215G1998 Vigna mungo
VMungo1383G1914 Vigna mungo

User provided reference genes

Program Settings