Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p38650 Brassica napus
A09p04720 Brassica napus
Aa31csc310G40 Aethionema arabicum
Aa31LG8G8100 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4115 Anthoceros agrestis
Actinidia00030 Actinidia chinensis
Actinidia01469 Actinidia chinensis
Actinidia40265 Actinidia chinensis
Ah.08g209950 Amaranthus hybridus
AL3G35470 Arabidopsis lyrata
AL8G22220 Arabidopsis lyrata
Aqoxy2G03025 Aquilegia oxysepala
Aqoxy7G02109 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0Z8DMS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.48D77H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B2GYKK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F2I1AW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KCV7HH Arachis hypogaea
AT3G21390 Arabidopsis thaliana
AT5G48970 Arabidopsis thaliana
ATR0706G162 Amborella trichopoda
Atru.chr4.2821 Acer truncatum
Atru.chr4.2823 Acer truncatum
AUR62006301 Chenopodium quinoa
AUR62026346 Chenopodium quinoa
BcaB04g19594 Brassica carinata
BcaC04g23753 Brassica carinata
BcaC06g30736 Brassica carinata
BolC7t44484H Brassica oleracea
BolC9t53431H Brassica oleracea
BraA06t26779Z Brassica rapa
BraA09t36108Z Brassica rapa
C07p39610 Brassica napus
C09p05050 Brassica napus
CAN.G484.28 Capsicum annuum
CAN.G556.11 Capsicum annuum
CANSAT78G1527 Cannabis sativa
CARHR097350 Cardamine hirsuta
CARHR097360 Cardamine hirsuta
CARHR284560 Cardamine hirsuta
Carub.0003s2142 Capsella rubella
Carub.0008s0872 Capsella rubella
Ca_01967_v3 Cicer arietinum L.
Ca_14438_v3 Cicer arietinum L.
Cc00_g10570 Coffea canephora
Cc00_g12100 Coffea canephora
CDE01G0771 Ceratophyllum demersum
CDE11G0851 Ceratophyllum demersum
CDE12G0249 Ceratophyllum demersum
Cfa015374 Carpinus fangiana
Ciclev10005390m.g Citrus clementina
CiPaw.01G149600 Carya illinoinensis
CiPaw.02G083800 Carya illinoinensis
ClCG06G005220 Citrullus lanatus
COL.COLO4_13892 Corchorus olitorius
Cpa.g.sc16.162 Carica papaya
Cre03.g200543 Chlamydomonas reinhardtii
CsaV3_6G017260 Cucumis sativus L.
CSS0013915 Camellia sinensis var. sinensis
DCAR_017868 Daucus carota
Dinv44391 Davidia involucrata
Duzib151G0839 Durio zibethinus
Duzib212G0465 Durio zibethinus
ECA246G5161 Erigeron canadensis
EL10Ac7g16788 Beta vulgaris
Eucgr.H03898 Eucalyptus grandis
Eucgr.H03901 Eucalyptus grandis
FAN07G0149 Fragaria x ananassa
FAN12G0604 Fragaria x ananassa
FAN12G2967 Fragaria x ananassa
FAN17G0572 Fragaria x ananassa
FAN22G2071 Fragaria x ananassa
FvH4_4g17870 Fragaria vesca
Glyma.07G248700 Glycine max
Glyma.09G045800 Glycine max
Glyma.15G153000 Glycine max
Glyma.17G025600 Glycine max
Gohir.A02G048900 Gossypium hirsutum
Gohir.A10G163400 Gossypium hirsutum
Gohir.D02G054200 Gossypium hirsutum
Gohir.D10G169700 Gossypium hirsutum
Gorai.005G059700 Gossypium raimondii
Gorai.011G189200 Gossypium raimondii
GSVIVG01017745001 Vitis vinifera
HanXRQChr06g0175101 Helianthus annuus
HanXRQChr17g0540421 Helianthus annuus
Haze_01223 Corylus avellana
Hma1.2p1_0698F.1_g205230 Hydrangea macrophylla
HPP92_002140 Vanilla planifolia
Hund03797 Selenicereus undatus
Hund19851 Selenicereus undatus
Lalb_Chr12g0196541 Lupinus albus
Lalb_Chr18g0051741 Lupinus albus
Lalb_Chr20g0114501 Lupinus albus
Lj3A818G40 Lonicera japonica
Lj3C815T15 Lonicera japonica
Lj4g0025854 Lotus japonicus
Lj6A673G92 Lonicera japonica
Lj6g0000143 Lotus japonicus
Lsat_1_v5_gn_3_32161 Lactuca sativa
Manes.03G194100 Manihot esculenta
Manes.15G013400 Manihot esculenta
Mapoly0023s0022 Marchantia polymorpha
MBI18_g14611_MAGBIO Magnolia biondii
MCO16G240 Micromonas commoda
MD16G1171300 Malus domestica
Medtr2g436930 Medicago truncatula
Medtr4g119770 Medicago truncatula
MELO3C021342.2 Cucumis melo
Migut.G00173 Erythranthe guttata
Migut.N00096 Erythranthe guttata
MSTRG.10086 Avicennia marina
Nitab4.5_0003749g0030 Nicotiana tabacum
Nitab4.5_0003972g0030 Nicotiana tabacum
Nn3g21410 Nelumbo nucifera
Nn4g25900 Nelumbo nucifera
Nn5g30053 Nelumbo nucifera
Oeu027732.1 Olea europaea
Oeu037753.1 Olea europaea
Os01g0934200 Oryza sativa ssp. japonica
Peaxi162Scf00534g00211 Petunia axillaris
PGR031G2215 Punica granatum
PGSC0003DMG400037262 Solanum tuberosum
Phvul.003G104200 Phaseolus vulgaris
Phvul.009G246900 Phaseolus vulgaris
Potri.008G210000 Populus trichocarpa
Potri.010G024100 Populus trichocarpa
Pp3c16_18800 Physcomitrium patens
PRCOL_00004167 Prasinoderma coloniale
Prupe.1G138100 Prunus persica
Psat1g153320 Pisum sativum
Psat4g027000 Pisum sativum
PSO170G2979 Papaver somniferum
PSO210G1191 Papaver somniferum
PSO832G4067 Papaver somniferum
QL06p008613 Quercus lobata
RcHm_v2.0_Chr2g0110421 Rosa chinensis
RcHm_v2.0_Chr4g0421981 Rosa chinensis
Rhsim04G0220400 Rhododendron simsii
Sabra08G0154200 Salix brachista
Sabra10G0014800 Salix brachista
SalBow2G1124 Salvia bowleyana
SalBow5G5005 Salvia bowleyana
Sc02g0000630 Simmondsia chinensis
Sc04g0007720 Simmondsia chinensis
Sed0019081 Sechium edule
SEGI_24801 Sequoiadendron giganteum
SGA_v2.0_scaffold67G22661 Striga asiatica
SHI00274 Sapria himalayana
SMO340G0281 Selaginella moellendorffii
Solyc01g067070.3 Solanum lycopersicum
Solyc12g099630.2 Solanum lycopersicum
Sopen01g028780 Solanum pennellii
Sopen12g034300 Solanum pennellii
Sp2g19360 Schrenkiella parvula
TAR365G0643 Trochodendron aralioides
TAR365G0881 Trochodendron aralioides
TAR636G1495 Trochodendron aralioides
THA.LOC104802687 Tarenaya hassleriana
THA.LOC104818930 Tarenaya hassleriana
THA.LOC104820252 Tarenaya hassleriana
Thecc.04G283100 Theobroma cacao
Thhalv10004544m.g Eutrema salsugineum
TPR.G26842 Trifolium pratense
TPR.G3201 Trifolium pratense
TWI53G1756 Tripterygium wilfordii
unitig_37.g12393 Utricularia gibba
vmacro08135 Vaccinium macrocarpon
VMungo1215G1245 Vigna mungo
VMungo1309G1779 Vigna mungo
Zm00001eb142190 Zea mays
Zm00001eb363480 Zea mays

User provided reference genes

Program Settings