Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Actinidia17576 Actinidia chinensis
Actinidia26242 Actinidia chinensis
Aqoxy3G03555 Aquilegia oxysepala
Aqoxy3G03556 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5S4EZI Arachis hypogaea
ATR0111G030 Amborella trichopoda
Atru.chr11.1686 Acer truncatum
Atru.chr11.1687 Acer truncatum
Atru.chr2.3147 Acer truncatum
Atru.chr2.3148 Acer truncatum
AUR62018135 Chenopodium quinoa
AUR62034469 Chenopodium quinoa
AUR62034474 Chenopodium quinoa
CANSAT01G2651 Cannabis sativa
CANSAT64G1162 Cannabis sativa
Ca_18817_v3 Cicer arietinum L.
Cc03_g14830 Coffea canephora
Cc03_g14880 Coffea canephora
Cfa008904 Carpinus fangiana
Cfa008906 Carpinus fangiana
Ciclev10013670m.g Citrus clementina
Ciclev10031419m.g Citrus clementina
CiPaw.06G090200 Carya illinoinensis
CiPaw.06G090300 Carya illinoinensis
ClCG05G023870 Citrullus lanatus
COL.COLO4_07432 Corchorus olitorius
COL.COLO4_27928 Corchorus olitorius
COL.COLO4_27929 Corchorus olitorius
Cpa.g.sc3.380 Carica papaya
CsaV3_5G033150 Cucumis sativus L.
CSS0016013 Camellia sinensis var. sinensis
CSS0024320 Camellia sinensis var. sinensis
CSS0029818 Camellia sinensis var. sinensis
CSS0031209 Camellia sinensis var. sinensis
DCAR_021666 Daucus carota
DCAR_025404 Daucus carota
Dinv11491 Davidia involucrata
Dinv33803 Davidia involucrata
Dinv33804 Davidia involucrata
Duzib147G0540 Durio zibethinus
Duzib268G1512 Durio zibethinus
EL10Ac2g03041 Beta vulgaris
EL10Ac2g03497 Beta vulgaris
Eucgr.D01288 Eucalyptus grandis
Eucgr.E03231 Eucalyptus grandis
Eucgr.E03232 Eucalyptus grandis
Eucgr.E03233 Eucalyptus grandis
Eucgr.E03234 Eucalyptus grandis
Eucgr.E03235 Eucalyptus grandis
Eucgr.E03236 Eucalyptus grandis
Eucgr.J01468 Eucalyptus grandis
FAN05G0827 Fragaria x ananassa
FAN05G2715 Fragaria x ananassa
FAN09G0588 Fragaria x ananassa
FAN09G0795 Fragaria x ananassa
FAN09G3446 Fragaria x ananassa
FAN14G0486 Fragaria x ananassa
FAN14G3309 Fragaria x ananassa
FAN14G5013 Fragaria x ananassa
FvH4_6g47570 Fragaria vesca
FvH4_6g47580 Fragaria vesca
FvH4_6g47620 Fragaria vesca
Glyma.09G162400 Glycine max
Glyma.16G212000 Glycine max
Gohir.A05G369800 Gossypium hirsutum
Gohir.A13G080100 Gossypium hirsutum
Gohir.D04G045500 Gossypium hirsutum
Gohir.D13G079900 Gossypium hirsutum
Gorai.012G050700 Gossypium raimondii
Gorai.013G091400 Gossypium raimondii
Haze_11979 Corylus avellana
Hma1.2p1_1813F.1_g303870 Hydrangea macrophylla
HPP92_017998 Vanilla planifolia
HPP92_026691 Vanilla planifolia
HPP92_026692 Vanilla planifolia
Lalb_Chr17g0341021 Lupinus albus
Lj2g0007579 Lotus japonicus
Lj2g0020882 Lotus japonicus
Lj4C115T12 Lonicera japonica
Lj4C115T14 Lonicera japonica
Manes.02G050500 Manihot esculenta
Manes.09G159600 Manihot esculenta
MBI16_g15565_MAGBIO Magnolia biondii
MD16G1064500 Malus domestica
MD17G1036600 Malus domestica
MD17G1055500 Malus domestica
MD17G1055700 Malus domestica
Medtr4g082810 Medicago truncatula
Medtr4g082820 Medicago truncatula
Medtr5g043630 Medicago truncatula
Medtr6g078320 Medicago truncatula
MELO3C012135.2 Cucumis melo
Migut.H00659 Erythranthe guttata
Migut.H00660 Erythranthe guttata
Migut.H00661 Erythranthe guttata
Nitab4.5_0000565g0060 Nicotiana tabacum
Nitab4.5_0008573g0060 Nicotiana tabacum
Nn1g09114 Nelumbo nucifera
Nn2g12291 Nelumbo nucifera
Nn3g17373 Nelumbo nucifera
Nn4g23330 Nelumbo nucifera
Oeu062141.1 Olea europaea
Os06g0288300 Oryza sativa ssp. japonica
Os06g0289200 Oryza sativa ssp. japonica
Os06g0289900 Oryza sativa ssp. japonica
Peaxi162Scf00166g00826 Petunia axillaris
PGR056G0005 Punica granatum
PGR056G0007 Punica granatum
PGR083G0325 Punica granatum
PGR083G1316 Punica granatum
PGR083G1384 Punica granatum
PGR083G2848 Punica granatum
PGSC0003DMG400001439 Solanum tuberosum
PGSC0003DMG400038989 Solanum tuberosum
PGSC0003DMG400039917 Solanum tuberosum
Phvul.004G137900 Phaseolus vulgaris
Phvul.004G138100 Phaseolus vulgaris
Phvul.004G138200 Phaseolus vulgaris
Phvul.004G138400 Phaseolus vulgaris
Phvul.004G138450 Phaseolus vulgaris
Potri.004G126000 Populus trichocarpa
Potri.017G089000 Populus trichocarpa
Prupe.1G282300 Prunus persica
Prupe.3G260000 Prunus persica
Prupe.3G260100 Prunus persica
Prupe.3G260200 Prunus persica
Psat2g128120 Pisum sativum
Psat7g154280 Pisum sativum
PSO528G0286 Papaver somniferum
QL02p039350 Quercus lobata
QL02p073358 Quercus lobata
QL03p070943 Quercus lobata
QL03p070950 Quercus lobata
RcHm_v2.0_Chr2g0166671 Rosa chinensis
RcHm_v2.0_Chr2g0166701 Rosa chinensis
RcHm_v2.0_Chr2g0166721 Rosa chinensis
RcHm_v2.0_Chr4g0438831 Rosa chinensis
Rhsim08G0073000 Rhododendron simsii
Rhsim10G0034200 Rhododendron simsii
Rhsim10G0047000 Rhododendron simsii
Sabra04G0066700 Salix brachista
Sabra04G0066800 Salix brachista
Sabra17G0078700 Salix brachista
SalBow1G3072 Salvia bowleyana
SalBow1G8205 Salvia bowleyana
Sc11g0004820 Simmondsia chinensis
Sc11g0004830 Simmondsia chinensis
Sed0003026 Sechium edule
Sed0019811 Sechium edule
SGA_v2.0_scaffold413G51162 Striga asiatica
Solyc02g088500.1 Solanum lycopersicum
Sopen02g033210 Solanum pennellii
Sopen02g033250 Solanum pennellii
Thecc.02G335900 Theobroma cacao
Thecc.02G336000 Theobroma cacao
Thecc.02G336100 Theobroma cacao
Thecc.02G336200 Theobroma cacao
Thecc.04G090000 Theobroma cacao
Thecc.04G090100 Theobroma cacao
TPR.G39983 Trifolium pratense
TWI75G0577 Tripterygium wilfordii
TWI75G1492 Tripterygium wilfordii
unitig_744.g24269 Utricularia gibba
unitig_744.g24270 Utricularia gibba
vmacro05669 Vaccinium macrocarpon
VMungo0464G0024 Vigna mungo
VMungo0464G0240 Vigna mungo
VMungo0464G1323 Vigna mungo
Zm00001eb280920 Zea mays
Zm00001eb280930 Zea mays
Zm00001eb280950 Zea mays
Zm00001eb380880 Zea mays
Zm00001eb381410 Zea mays

User provided reference genes

Program Settings