Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p11110 Brassica napus
A09p61570 Brassica napus
Aa31LG1G40 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3898 Anthoceros agrestis
Actinidia16697 Actinidia chinensis
Ah.05g167700 Amaranthus hybridus
AL1G27170 Arabidopsis lyrata
Aqoxy5G03879 Aquilegia oxysepala
Aqoxy6G00508 Aquilegia oxysepala
Aqoxy6G00509 Aquilegia oxysepala
Aqoxy7G02147 Aquilegia oxysepala
Aqoxy7G02189 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8F881C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A779NY Arachis hypogaea
AT1G15110 Arabidopsis thaliana
ATR0691G123 Amborella trichopoda
Atru.chr11.329 Acer truncatum
AUR62002771 Chenopodium quinoa
AUR62037259 Chenopodium quinoa
BcaB02g06576 Brassica carinata
BcaB03g14561 Brassica carinata
BcaC05g25442 Brassica carinata
BcaNung05515 Brassica carinata
BolC5t30060H Brassica oleracea
BolC8t52064H Brassica oleracea
BraA06t24290Z Brassica rapa
BraA09t41530Z Brassica rapa
C05p13230 Brassica napus
C08p45160 Brassica napus
CAN.G139.1 Capsicum annuum
CAN.G1489.18 Capsicum annuum
CARHR015630 Cardamine hirsuta
Carub.0001s1487 Capsella rubella
Ca_30213_v3 Cicer arietinum L.
Cc11_g09310 Coffea canephora
CDE06G0787 Ceratophyllum demersum
CDE07G1100 Ceratophyllum demersum
Cfa015818 Carpinus fangiana
Ciclev10015341m.g Citrus clementina
CiPaw.05G244900 Carya illinoinensis
CiPaw.06G015200 Carya illinoinensis
ClCG01G006000 Citrullus lanatus
ClCG05G022350 Citrullus lanatus
COL.COLO4_38548 Corchorus olitorius
Cpa.g.sc65.87 Carica papaya
CsaV3_5G028680 Cucumis sativus L.
CsaV3_5G034740 Cucumis sativus L.
CSS0004358 Camellia sinensis var. sinensis
CSS0038999 Camellia sinensis var. sinensis
CSS0043066 Camellia sinensis var. sinensis
CSS0044058 Camellia sinensis var. sinensis
DCAR_030184 Daucus carota
Dinv04909 Davidia involucrata
Dinv16161 Davidia involucrata
Duzib248G1136 Durio zibethinus
Duzib251G0696 Durio zibethinus
Duzib268G1865 Durio zibethinus
ECA233G3005 Erigeron canadensis
ECA246G4421 Erigeron canadensis
EL10Ac1g01504 Beta vulgaris
Eucgr.B02865 Eucalyptus grandis
FAN07G0957 Fragaria x ananassa
FAN12G0213 Fragaria x ananassa
FAN12G3413 Fragaria x ananassa
FAN17G2320 Fragaria x ananassa
FAN22G0804 Fragaria x ananassa
FvH4_4g26430 Fragaria vesca
Glyma.10G268300 Glycine max
Glyma.20G122800 Glycine max
Gohir.A09G005100 Gossypium hirsutum
Gohir.A12G141400 Gossypium hirsutum
Gohir.D09G004400 Gossypium hirsutum
Gohir.D12G146300 Gossypium hirsutum
Gorai.006G006000 Gossypium raimondii
Gorai.008G157600 Gossypium raimondii
GSVIVG01008367001 Vitis vinifera
GSVIVG01011808001 Vitis vinifera
HanXRQChr14g0459241 Helianthus annuus
HanXRQChr17g0553131 Helianthus annuus
Haze_00678 Corylus avellana
HPP92_008281 Vanilla planifolia
HPP92_021847 Vanilla planifolia
HPP92_026069 Vanilla planifolia
Hund20721 Selenicereus undatus
Lalb_Chr02g0145651 Lupinus albus
Lalb_Chr06g0165751 Lupinus albus
Lalb_Chr21g0308661 Lupinus albus
Lj5g0010985 Lotus japonicus
Lj6A750T93 Lonicera japonica
Lsat_1_v5_gn_3_56601 Lactuca sativa
Lsat_1_v5_gn_8_41841 Lactuca sativa
Manes.06G063400 Manihot esculenta
Manes.14G109300 Manihot esculenta
Mapoly0057s0110 Marchantia polymorpha
MBI10_g06746_MAGBIO Magnolia biondii
MCO02G069 Micromonas commoda
MD13G1033100 Malus domestica
MD16G1035000 Malus domestica
Medtr1g109120 Medicago truncatula
MELO3C005332.2 Cucumis melo
MELO3C012286.2 Cucumis melo
Migut.E00388 Erythranthe guttata
Migut.L01016 Erythranthe guttata
MSTRG.2203 Avicennia marina
MSTRG.7632 Avicennia marina
MSTRG.874 Avicennia marina
Nitab4.5_0000350g0060 Nicotiana tabacum
Nitab4.5_0000881g0100 Nicotiana tabacum
Nitab4.5_0003886g0040 Nicotiana tabacum
Nitab4.5_0004597g0050 Nicotiana tabacum
Nn4g24020 Nelumbo nucifera
Oeu031392.1 Olea europaea
Oeu036128.1 Olea europaea
Oeu048389.1 Olea europaea
Os01g0118300 Oryza sativa ssp. japonica
Os01g0683550 Oryza sativa ssp. japonica
Os05g0554400 Oryza sativa ssp. japonica
Peaxi162Scf00205g01127 Petunia axillaris
Peaxi162Scf00897g00114 Petunia axillaris
PGR102G2387 Punica granatum
PGSC0003DMG400030564 Solanum tuberosum
Phvul.007G034000 Phaseolus vulgaris
Potri.008G126100 Populus trichocarpa
Potri.010G117500 Populus trichocarpa
Pp3c26_4170 Physcomitrium patens
Pp3c4_15740 Physcomitrium patens
PRCOL_00004560 Prasinoderma coloniale
Prupe.1G319700 Prunus persica
Psat6g222840 Pisum sativum
PSO017G5274 Papaver somniferum
PSO478G4444 Papaver somniferum
QL01p003075 Quercus lobata
RcHm_v2.0_Chr4g0434061 Rosa chinensis
Rhsim09G0102000 Rhododendron simsii
Sabra08G0095000 Salix brachista
Sabra10G0086900 Salix brachista
Sabra10G0088500 Salix brachista
SalBow8G2252 Salvia bowleyana
SalBow8G5575 Salvia bowleyana
Sc04g0005900 Simmondsia chinensis
Sc14g0007250 Simmondsia chinensis
Sed0016261 Sechium edule
Sed0018132 Sechium edule
Sed0021449 Sechium edule
Sed0022429 Sechium edule
SEGI_02132 Sequoiadendron giganteum
SGA_v2.0_scaffold14G06919 Striga asiatica
SGA_v2.0_scaffold170G38819 Striga asiatica
SMO116G0260 Selaginella moellendorffii
Solyc04g007520.3 Solanum lycopersicum
Solyc05g008580.3 Solanum lycopersicum
Sopen04g002600 Solanum pennellii
Sopen05g004420 Solanum pennellii
Sp1g13450 Schrenkiella parvula
TAR371G0966 Trochodendron aralioides
TAR629G3334 Trochodendron aralioides
THA.LOC104805051 Tarenaya hassleriana
Thecc.02G215000 Theobroma cacao
Thhalv10007726m.g Eutrema salsugineum
TPR.G4874 Trifolium pratense
TWI75G1265 Tripterygium wilfordii
unitig_746.g26864 Utricularia gibba
vmacro10616 Vaccinium macrocarpon
vmacro12220 Vaccinium macrocarpon
VMungo0720G1815 Vigna mungo
Zm00001eb103650 Zea mays
Zm00001eb125990 Zea mays
Zm00001eb294100 Zea mays
Zm00001eb295120 Zea mays
Zm00001eb334750 Zea mays
Zm00001eb335270 Zea mays
Zm00001eb343120 Zea mays
Zm00001eb367010 Zea mays
Zm00001eb371470 Zea mays

User provided reference genes

Program Settings